Etheostoma cragini (Arkansas darter): 117944227
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Entry
117944227 CDS
T07493
Symbol
tars1
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117944227 (tars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ecra01007
]
117944227 (tars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecra03016
]
117944227 (tars1)
Enzymes [BR:
ecra01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
117944227 (tars1)
Amino acid related enzymes [BR:
ecra01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
117944227 (tars1)
Transfer RNA biogenesis [BR:
ecra03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117944227 (tars1)
Prokaryotic type
117944227 (tars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
117944227
NCBI-ProteinID:
XP_034726733
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All DBs
Position
5:21556916..21572286
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AA seq
724 aa
AA seq
DB search
MADRTVVEKMNELQVDEKKKGGTESGKDGGKKKAKSSTGDSGGRAELTPAPQYIDERLTL
YAKLKAEHEALMAERAAKNSRAIKVTLPDGKVVDAESWKTTPYQVACGISQGLADNTVIA
KVNNGVWDLDRPLEDDCSLQLLKFDDEEAQAVYWHSSAHILGEAMERVYGGCLCYGPPIE
NGFYYDMFLENNEGVSSNDFPCLETLCKKIIKEKQPFERLEIKKETLLEMFKYNKFKCRI
LNEKVTTPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTYWEGKADMETLQRIYG
ISFPDPKMLKEWEKFQEEAKNRDHRKLGREQDLFFFHDLSPGSCFFMPKGAFIYNTLIEF
IRSEYRKRGFQEVVTPNIYNSKLWQTSGHWQHYSDNMFSFEAEKETFALKPMNCPGHCLM
FDHRPRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTMDQIEEEIKGC
LDFLRTVYEVFGFTFKLNLSTRPEKFLGDPGVWDQAEKQLENSLNDFGEKWILNPGDGAF
YGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSHDGEDKKRPVIIHRAILGSVER
MIAILTESYGGKWPLWLSPHQVMVVPVGPTCEDYAQKVKQDFHNNGFMTDVDLDPGCTLN
KKIRNAQLAQYNFILVVGEKEKTSNTVNVRTRDNKVHGERTVEECIERLKQLKTCRSRNA
EEDF
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccgaactgtcgtggagaaaatgaacgaattgcaagtggatgagaaaaaaaag
gggggaactgaaagtggtaaagatggaggaaaaaagaaggccaaaagtagtactggggac
tctggaggcagggcagagctgacaccagctccccagtacattgatgagcgtcttactttg
tacgccaagctgaaagctgagcatgaagctctgatggcagagagggctgcgaagaacagc
cgtgccatcaaggtgactctgcccgatggaaaggtggtggatgccgagtcctggaagacc
acaccataccaagtggcctgtggaatcagtcaaggccttgccgacaacacagtgattgct
aaagtgaacaatggtgtatgggacctggacaggccactggaggatgactgcagccttcag
ttgctgaagtttgatgatgaggaggcccaagctgtttactggcactccagcgcccatatc
ttgggtgaagccatggagagggtgtacggaggctgcctctgctacggtccccccattgag
aacggcttctactacgacatgttcttggagaacaatgagggcgtatcgagcaatgacttt
ccatgtctggagaccttgtgcaagaaaattatcaaggagaagcagccttttgagaggctt
gagataaaaaaggaaactctattggaaatgtttaagtacaacaagtttaagtgccgcatt
ctgaatgagaaggttaccactcccaccactacggtttacaggtgtggtcccttaattgac
ttgtgccgcgggccccatgtgagacatacaggaaaaatcaaggcacttaagatccacaag
aattcgtctacatactgggagggaaaggcagacatggaaaccctccagaggatctatgga
atctccttccctgaccccaaaatgctcaaagagtgggagaagtttcaggaggaagccaag
aaccgagatcaccgcaaactgggccgggagcaggacctgttcttcttccatgacttgagt
ccaggaagctgcttcttcatgcctaagggagcctttatctacaacaccctgattgagttc
atcagaagtgagtacaggaagagaggtttccaggaggtggtgacacccaacatctataat
agtaagctgtggcagacctccggccattggcagcactacagtgacaacatgttctccttc
gaggctgagaaggaaaccttcgcccttaaacccatgaattgccccggacactgcctgatg
tttgatcaccggccacgctcctggagagagttgccccttcgcatggccgactttggcgtt
ctgcacaggaacgagctgtcaggagccctgacaggcctcacccgtgtccgccgcttccaa
caggatgatgctcatatcttctgcaccatggaccagattgaagaggagatcaagggctgc
ctggatttcctgcggactgtgtatgaggtgtttggcttcactttcaaactcaacctctcc
acaagaccagaaaagttcctgggggacccgggcgtctgggaccaagcagaaaagcaactg
gagaacagcttgaatgattttggggagaaatggattctcaatcccggtgatggagctttt
tatggaccgaagattgacattcagattaaggatgccattggtcggtaccatcagtgtgcc
acaattcagcttgatttccagctcccgatccgcttcaatctcacctttgtcagtcatgat
ggcgaagacaagaagagaccagtgatcatccacagagctatcctgggatcagtagagagg
atgatcgctattctgactgaaagctatggaggcaaatggccactgtggctctctcctcat
caagtgatggttgtacctgttggaccgacctgtgaggactacgctcagaaggtcaagcag
gatttccacaacaacggcttcatgactgatgtggatctcgaccccggctgtactctgaac
aaaaagatcagaaatgcacagctggcgcagtacaactttatcctggtggtgggagagaag
gagaagacgagtaacactgtgaacgtacgcacccgagataacaaagtccatggcgagcgc
actgtggaggagtgcattgagcgtctgaaacaactcaagacctgcagaagtcgaaatgct
gaagaggacttctga
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