Etheostoma cragini (Arkansas darter): 117944242
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Entry
117944242 CDS
T07493
Symbol
si:dkey-32e23.4
Name
(RefSeq) dynamin-1-like protein isoform X1
KO
K17065
dynamin 1-like protein [EC:
3.6.5.5
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04217
Necroptosis
ecra04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117944242 (si:dkey-32e23.4)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117944242 (si:dkey-32e23.4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117944242 (si:dkey-32e23.4)
03029 Mitochondrial biogenesis [BR:
ecra03029
]
117944242 (si:dkey-32e23.4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecra04147
]
117944242 (si:dkey-32e23.4)
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
117944242 (si:dkey-32e23.4)
Membrane trafficking [BR:
ecra04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
117944242 (si:dkey-32e23.4)
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
117944242 (si:dkey-32e23.4)
RhoA-dependent endocytosis
117944242 (si:dkey-32e23.4)
Mitochondrial biogenesis [BR:
ecra03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
117944242 (si:dkey-32e23.4)
Retention of mitochondria
117944242 (si:dkey-32e23.4)
Exosome [BR:
ecra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117944242 (si:dkey-32e23.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
117944242
NCBI-ProteinID:
XP_034726770
LinkDB
All DBs
Position
5:complement(29278846..29293735)
Genome browser
AA seq
673 aa
AA seq
DB search
METLIPTINRLQEVFLTVGAEVIQLPQIVVVGSQSSGKSSVLESLVGRDFLPRGSGIVTR
RPLVLQLVNVAPLQERLKSENGNGVKQNPQSSYPGVKAEEWGTFLHCKNQIFADFQEIRQ
EIEAETERGSGDNKGITPEPIYLKIFSPKVLNLTLVDLPGITKVPVGDQPEDIEAQVQEM
ILSFISNPNSLILTVSPANSDLATSDALKLAREVDPDGRRTLLVVSKLDLMDAGTDALEV
LLGRVIPVRLGIIGVVNRSQHDINTQKSLEDTVRDEHAFLQRHYPSLASRAGSRYLAKTL
SRLLMHHIRDCLPELKTRVTVLSAQYQARLNSYGQPVEDHSATLLQIVTKFASDYCNTIE
GTARYIQTSELCGGARICYIFHETFGRTLQSIDPLGGLTELDILTAIRNATGPRPALFVP
EVSFELLVKRQIKRLEEPSMRCVELVHEELQRIIQHCSSYSTQELIRFPKLHDSIVEVVT
GLLRKRLPVTNEMVHNLVAIELAYINTKHPDFTDAAQVSASVNSQQAEAVDGGKRWKSEK
VAEERVPAAGFGSPSKSQAINLLDSAMPVSRKLSAKEQRDCEIIQRLIKCYFLIVRKSIQ
DSVPKTVMHFLVNFVKEHLQSELVGQLYKQGLLQELLIESQDTAQQRTEVAQMLEALKKA
HNIISEMRETHLW
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggagaccctgattcccaccatcaaccggctgcaggaggtgttcctcacagtgggtgca
gaggtcatacagctccctcagatagtcgtggttggatcgcagagcagtggaaagagctct
gtgttggagagcctggttggacgggactttctgcctcggggatcaggaatcgtcacgaga
cgacccctcgtgttgcaacttgttaatgttgctcctctgcaggagagactgaagagcgag
aatggaaatggggtaaagcaaaatccccaaagcagctacccaggtgtcaaagctgaagaa
tggggtacattcctgcactgcaagaaccagatcttcgcagattttcaggaaatccgtcag
gaaattgaagccgagactgaacgcggttcaggtgacaacaagggaatcactccagaaccc
atctatctgaagattttctcccccaaagtccttaatcttaccctggttgatttacctgga
attactaaggttcctgttggcgaccagccagaagatattgaggcacaagtacaagagatg
atcctgtccttcatctccaatccaaactccctcatcctcacagtgtcccctgccaattct
gacttggccacctctgacgctctgaaattggctcgcgaggtcgatccagatggtcgtcga
acactgctggtggtcagtaagctggacctgatggatgcagggactgatgctctggaggtc
ctattgggtcgagtcattccagtcagacttgggattatcggtgtggttaacaggagccag
catgacatcaatacccagaagagcctggaggacacagtgagggatgagcacgccttcctg
cagcgccactacccttcgctggcctcccgcgccggctcacgctatctggccaaaacgctc
agccggctgctcatgcaccacatccgggactgcctgccagagctcaaaacccgagtgacg
gtgctgagtgcccagtaccaggcgcggctcaacagctacggccagccagtcgaagaccac
agtgccaccctgctgcagatcgtcaccaagttcgccagcgattactgcaacaccatcgag
ggaacagccagatacatccagacctcggagctctgtgggggtgctcgcatctgttacata
ttccatgagacctttgggcgcacccttcagtccatcgaccccctgggaggactgacggag
cttgatatcctcactgccatccgcaatgcaacgggtccacggccagcactttttgttccc
gaggtgtcctttgagttgttggtgaagcggcaaattaagcggctggaggagccaagtatg
cgctgtgtagagctggttcacgaagagctgcagaggatcatccagcactgctcctcctac
agcacacaggagctcatacgtttccccaaactgcacgattccattgtggaagtagtgact
ggattactgaggaagcgcttgccggttactaatgaaatggtacacaatttagtagcaata
gagctcgcctacatcaacacaaaacacccagacttcacagatgcagcgcaggtctctgcg
tctgtcaacagtcagcaggcggaggctgttgatggagggaagcgctggaagagcgagaag
gtcgcagaagaaagggttccggctgcaggctttggcagtcccagcaaaagccaggccatt
aacctcctcgactcagcaatgcccgtttcccgcaagctgagtgcgaaggagcagagggac
tgcgagatcatccaacgcctcatcaagtgttacttcctcattgtccgcaaaagcatccag
gacagtgtgcctaagacagtgatgcacttcctggtgaacttcgtgaaagagcatctgcag
agtgagctggtgggtcagctttacaaacagggactgctgcaggagctgctcattgagtca
caggacacggcacagcagcggaccgaggtggctcaaatgcttgaggcgctcaaaaaagcc
cataacatcatctctgagatgagggagacgcatctgtggtag
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