Etheostoma cragini (Arkansas darter): 117944253
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Entry
117944253 CDS
T07493
Symbol
pdlim2
Name
(RefSeq) PDZ and LIM domain protein 2
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117944253 (pdlim2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
117944253 (pdlim2)
Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
117944253 (pdlim2)
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GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
DmmA-like_C
DZR
zf-HYPF
Motif
Other DBs
NCBI-GeneID:
117944253
NCBI-ProteinID:
XP_034726797
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Position
5:28832992..28867645
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AA seq
367 aa
AA seq
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MALTVNLIGPSPWGFRIFGGRDFKKAITVSKVNGGSKADKADLQPGDIILEINRENTADM
LNVEAQNKIKNSKTQLQLLVERPEPPSPGQTNGIGSPEQLTGRFQEAVIVSRDENQNYRE
YTISSPASLSPGPYSPDPFPSPDGKRERLTPTINKSVQLRPWSPVEKSHRLSRPLSQEFS
PSDHRNNSVYSRTPTPPGRYSPHSPIDRDVPTSPRRSSSSSDFAMQKFDRDSEVYKMIQE
NKESRSAPRQSNTFKILQEVLEADEKEAALRFPGKLSPNAPTLSTSVGGVKKIHTCEKCG
TSIGTLAVRIADDRFRHAECYTCTDCGLNLRMRGHFCVGDVMYCEKHAKQRYQGPGSLPQ
ATMSQHQ
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacggtgaaccttatcggtccttcaccatggggcttcagaatatttggagga
agggacttcaagaaggccataactgtatcaaaggtcaacgggggcagcaaggcagacaag
gccgacctgcaacctggggacatcatcttggagatcaacagggaaaacacggcggacatg
ctgaacgtggaggcccagaacaagatcaagaactccaagactcagctgcagctgttggtg
gagagacctgagcctcccagccctggacagactaatggcatcggcagccctgagcagctc
accggacgcttccaggaggcagtaatagtgagtagagacgagaatcagaactacagagag
tacaccatctccagccctgcgtcgctgtcccctggaccttattccccagatccttttccc
agccccgacggaaagagggagaggctgacaccgaccatcaacaaaagtgtccagctgcgt
ccatggtctccagtggagaagagtcaccgactgtccagaccgctgtcacaggagttctcc
ccttcagaccacagaaataactctgtgtacagcagaaccccgaccccacctggacgctac
tccccccatagccccattgatcgggatgtacccacgtctccacgtcgcagcagttcaagc
tctgactttgccatgcagaagttcgacagggactcggaagtgtacaagatgattcaggag
aataaggagtcccgctcggcacctcgtcagtccaacacgtttaaaatactgcaagaggtc
ctggaggctgacgagaaagaggcagccttgcggttcccagggaaactttcgcccaacgcc
cccacactaagcacatcagtgggaggggtcaagaaaatccacacctgtgagaagtgtggc
acgagcatcggcacgctggccgtgcgcatcgcagacgaccgcttccggcacgcagagtgc
tacacctgcacagattgcggtctcaacctcaggatgaggggtcacttttgcgttggagac
gtgatgtactgtgagaagcacgccaaacagaggtaccaaggcccgggcagtctccctcaa
gccaccatgtcccagcatcagtga
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