Etheostoma cragini (Arkansas darter): 117944331
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Entry
117944331 CDS
T07493
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117944331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117944331
Membrane trafficking [BR:
ecra04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117944331
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
117944331
RAVE complex
117944331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
EIF3I
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML
PEP5_VPS11_N
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_WDR19_2nd
Beta-prop_IP5PC_F
Beta-prop_DCAF12
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
117944331
NCBI-ProteinID:
XP_034726889
LinkDB
All DBs
Position
5:complement(19515029..19571799)
Genome browser
AA seq
3112 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSVNDVPFTAYASGCDVVILGSNFERLQIIPGAKHGNIQV
GCVDCSLQGGQIAASYGSIVCVFEPVQHPDQKDTSLSQNCQWQKTGQFALKSMVRNLAWH
PTGSTLLTGSSSLQLWSNVDGVKDEAEEVEKQTDVTLRDSHSAWSCIWQSKTASPVSLMK
FSPDGEFFATAGQDDCLVKVWYSTSKWKSGVFKLFTPPEQSVSFQGELAFSFVYLAHPRS
VTGFSWRKTSKYMPRGAVCNVLLTCCKDSVCRLWAETLLPGDSLLSTYHDNHTGQHSDTP
RCAGPSGKNACNGKSQGRTAQEVSYSNLNLRESLDASFYRDVPQPSLTGCLPHHQSQHYN
HKRSSSSMPHANALCHFHIAASINPATDIPLLPSISSLSGVDDEEPGGPFTVHWLNNKEL
HFTLAMEVFLQQLRGSLEQENECSNEEPEDEDNFNEEDNGSRPSNSQVPEAVELPLAAVK
HQVDGLLEEWNKGADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQAQVSFVSRIPVAFPT
GDAISLSHSVVMYACNKNVDLAIQHGRQRPPGNTLPQTKTALISYGGQGKALPSSSLRLS
IFTPNVLMISKHADGSLNQWAVSFAEDSAFSTVLSVSHKSRYCGHRFHLNDLACHSLLPL
LLTTSHHNALRTPEADSILAPPDTYSSGFSHSTSLPQGSRPSRVSLGVVSQDPNAIYSEL
ILWRVDPVGPLSLSGGVAELARINSLNSSAFANVAWLPTLIPSSCLGAYCNSPSACFVAS
DGHSLRLYQAVIEAKKLLSELSNPEISKYVGEVFNIISQQSTAKPGCIIELDSITDFQGK
QTQLLHVFEEDLILGSEKRTESTQATPDFLHTAASSKAAFSARFFLVVVELTPTGRSLLH
MWHLHLAAQPITMEDTMENDATTASPMNSSTLSFDTFRSPITQKSKPCTSNLQSACRLSL
TTHRLYSQEMALPEGVEAISVTPSAGHLSASCSLPADRVPYLLATSCSDRKVRFWRCNVT
APEPSIMDNVVYQWEEWPLLVEERLPNSSEVRVQGRPIEVSCCHSGRIAVAYRQMPNTHL
SSTPYLNSHGLLTSPLTLSSLPYVQSNTHQTPTLTVHRSPNLTPSPILANTREPLVHIGI
FQCESTGGSQWILEQTIVLDSTDPTTGSANIPGNLDLPMPNEEDCPGSISKSQVHLDWVS
QEDGSHILTVGIGTKIYMYGRLSGKPPELCLTSDASRDQSLSRLVLLRSVDLVSSVEGSL
PIPVSLSWVRDGILVVGMDCEMHVYSQWQPPAPPKPNPVIAQDTDISSSVSSIISAVRQS
QEEGLSTGTTMSSLAPPKKALTRSMMSLAQKLSGKRTAYDLPAEMEDSGLFEAAHQLFPT
LPQYHPVHLLELMDLGKVHRAKAILSHLVKCIAGEIVALKDSTTNPEKRVRSRTISAGGS
TARDLKMFCKAENSTPDYTEISSIPPLPLYALLAADEDTSPKPDKVGSVSGDSGHGSSHT
DVYDELFHTPSIADLDPLEDNQEETGNKVIDLSQYSPTFFGPEHAQVLSSHLLHSSLPGL
TRMEQMSLMALADTIATTSTDLKDSQGKSKGGETLDECGLKFLLAVRLHTFLSTSLPPAH
RAQLLRQGLSTCHYAWAFHSEAEEELLNMLPALQKGEPTWPELRSMGVGWWLRSTNKLRR
CIEKVAKTSLQRNNDPLDAAIFYLALKKKAVVWGLYRSQNNAKMTEFFRNNFNEDRWRKA
ALKNAFSLLGKQRFQHSAAFFLLAGSLKDAVEVCLEKMQDLQLALVISRLYESEFEMSST
YKKILQRHVLGQDKQIQAHQDPFLRSMAYWVLEDYSRALDTLLEQPANSTSSGSAESKCN
AGSSSVSACNPEVFNFYTYLRTHPLLLRRHFGSSDKAKVGLTAEGRRADSISLEERKLFF
TAAYAHLQSGCPMLALEVLSKMPKVRKHSKLPHQEDTSTAAELSVESKNGQTLEPDWSQP
ALNGYESDTNSLSNSRSDSVLSFDWSQPSLVRADESLELKWDIDKDDDDNEEEDEDEEEN
KNVKSGRSADSSSVFQDTQDAISPLMETVTREDCNDFLDPSNDTLAAQLKFTACLKIMTN
ELRTLSTGYELDGGKLRCQLYQWLEREVVALQRCCSYKPFFPELSAQGDAPISGLVEEEQ
PGSPRGDSQRSRRHWLQSNQHLLRMFLSYCSLHGSHGGGLASVRMELILLLQESHQDDTI
QSAVMPCQPTSIPLLMACTANVKTVVANPIVYLTNMAHDILQTINSLDSPPHPDVVNNEI
YVMHTLAASLSACIYQCLCDGHTHSHVNHFTGIVYQSVLLSQKQPVRTVSMDESVQPNTS
PAQWPGIASLIRLLSSAGEESQPGLTVLLCEILTAVFLSLFVHGMATHSSNELFRIVAHP
LNSKLWVTVFGGGARSPVIEKPNSPMRTPPPASPSGSERKSRRFRLLSSRSGSKEESGIE
RGCPSIPKDDHVVENEATSIFKERFVPPELSVWDYFITKPSLPPSENRIEYDSEESQGSQ
DEEEDDCQYEDVFDPSSPQREHSNHNSYSWCLMRLAMVQLVLVNLKSFYPMAGYDLLELP
VGSPLCHAVLKTLQRWEQLLQKRLEIFGGPPSKYISNPLQDETAAPGPALLRHKALFEPS
NTPFRTSHHSALPEKRLWQFLVKQEEVQETFIRNIFTKKRDTNELGEDQTDNVKCSGMEE
TGNYQTETDLGSPGGKARIIHKESDIITAFAINKANRNCLVMASTHDIQELDVSSILATQ
ILTWIDDDDAEAKGACSDDFLVVHARDDFTALHGTTPYTHSSPGTPIHMPWLGGVQTGRG
AAVMIKRNINNVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQIICFRSPGNSRVTRIRF
NHQGNKFGIVDADGGLSLWQTNTSGTAPKPYLTLQCHNKTANDFVFVGSSSLIATAGLST
DNRNVCLWDTLVTPANSLVHAFCCHESGATVLLMASRQQLLITGGRKGWISVLELAHRHQ
RQSFQAHDSPVKALAVDPTEDCFISGSAEGNIKIWSLATHCLLYTFPNEHARQSMFRNLG
TGVMQIEVGPSNHIFSCGADGTMKMRCLPNRFSVANNNNNHGNLKIDVKFIV
NT seq
9339 nt
NT seq
+upstream
nt +downstream
nt
atgaatctccatcaggtcctcacaggggctgtcaaccctggagacaattgtttctctgta
gggagcgtcaacgatgtgccattcacggcctatgcgtcaggttgtgatgtggtgatttta
ggcagtaactttgagcgactgcagatcatcccaggggccaaacatggtaacatccaggtc
ggctgtgttgactgctcactgcagggtggacagattgcagcttcctatggaagcattgtg
tgtgtctttgagcctgttcaacacccagatcaaaaagacacatcactgtctcagaactgc
caatggcagaagactggtcaatttgcattaaagtctatggtacggaacctggcctggcac
cctacaggcagcactttgttaacaggctctagtagcctccagttgtggtctaatgttgac
ggagtgaaagatgaagctgaagaagtggaaaagcagacagacgttaccctaagagactct
cattctgcctggagctgtatctggcaaagcaagacggcctctccagtcagtttaatgaag
ttctctcctgatggggaattctttgctaccgctggacaggatgactgcctagtaaaggtc
tggtacagcactagtaagtggaagtcgggtgttttcaaactcttcacacctccagaacaa
agtgtcagtttccagggagagctggccttttcatttgtttacctggcacatccccgatct
gtaactggtttttcttggaggaagaccagcaagtacatgccacgaggtgcagtgtgtaat
gttctgctcacctgctgtaaggacagcgtgtgtcggctctgggcagagacgcttttgccg
ggtgacagccttctgtccacttaccatgacaaccacactggccagcacagtgatacaccc
aggtgtgctggtccttctggtaaaaatgcctgcaatgggaagtcgcaaggaagaacagca
caggaagtaagctactcaaatttgaatcttcgagaatcattggatgcctcgttttatcgg
gatgtgccccagccctctctgactggctgcctgcctcaccatcagagccaacactataat
cataaaaggagcagcagcagcatgcctcatgccaacgctctatgccatttccacattgct
gcaagcatcaaccctgccaccgacattcctctgctaccctccatctcctctctgagtggc
gtggatgatgaggaacctggaggaccttttaccgtccactggctcaacaacaaagagctt
catttcactttagctatggaagtcttcctgcagcagcttagaggcagcctggagcaagag
aacgaatgctctaatgaagagcctgaagatgaggataactttaatgaagaagacaatggt
agcaggccaagcaactctcaagtacctgaggctgtggagcttcctttggcagcagtgaag
caccaggtggatgggctattagaggagtggaataaaggggcagacatgttgttcagtatc
catcccatggacggctctctgttagtctggcatgtagactggttagatgaataccagcct
ggcatgtttagacaagctcaggtgtcgtttgtgtcccgtatcccagtagcgttccctaca
ggtgatgccatctccttgagccacagtgtggttatgtatgcctgcaacaagaacgtggat
ctggctatccaacatggccgacagcgaccacccgggaacacattgcctcaaaccaaaact
gctcttataagctacggaggtcaaggaaaagctttacccagcagtagtcttcgactaagc
atttttacccccaacgtccttatgatctccaaacacgctgatggctccttgaaccagtgg
gcagtcagctttgcagaggactctgctttctccaccgttcttagcgtctctcacaagtca
cggtactgtggccaccgcttccaccttaatgacctggcctgtcactcattactccctctc
ctcctcaccacttcacaccacaacgccctgaggacgcctgaggcagacagcatcctggct
cctccggacacctactcctcgggtttctcacattcaacatctctgcctcaagggtcacgg
cctagccgggtgtccctgggtgtagtatcccaggatcccaatgcgatctacagtgagctg
attttatggagagtggaccctgtcggcccactttctttgtcaggcggggtcgccgagcta
gctcgaatcaattctctcaattcatcagcatttgcaaatgtagcctggctgcccacactc
attcctagcagctgtttaggtgcgtactgtaattctcccagcgcctgcttcgttgcaagt
gacggccactcactcaggctgtatcaagctgttattgaagctaagaaactcctgagtgag
ctctccaatcctgagatatcaaaatacgttggcgaggtgttcaacatcatcagtcagcaa
tccacagcaaaacccgggtgtattatagagttggattccattactgactttcaggggaag
cagacccaactcctacatgtttttgaggaggatctgatccttggcagtgagaagagaaca
gaaagcacacaggcaactccagattttcttcacacagcagcctcaagcaaggcggctttc
tcggcacggtttttccttgtggtggtcgaattgaccccaacaggtcgctctctcctccac
atgtggcatctccatcttgctgctcaacctatcaccatggaagatacgatggagaacgat
gccaccacagcttctcctatgaacagttctactttgagctttgacacgttcagatctcca
ataactcagaagagtaaaccctgcacttccaatctgcagagtgcctgtcgcctcagcctc
acaacacacaggctatacagccaagaaatggctctgccggaaggagtggaagccatcagt
gttacaccttcagcaggtcacctgagtgcgtcatgttctctgccagctgatcgtgtgcct
tacctccttgctacttcctgttctgatagaaaggttcggttctggaggtgcaatgtcacg
gcgccagagccatccattatggacaacgtggtgtaccagtgggaggagtggcctctgctg
gtggaggagagacttcccaacagcagtgaagtaagagtgcaaggtcgtcctatagaggtc
agctgctgtcactctggacggattgcagttgcttacaggcaaatgccaaacacacatctg
agctcgacaccctatctgaactctcacggactgttgacttctcctcttactttgtcttcc
ctcccatacgtgcagtccaacacccaccagaccccaaccctaactgtacatcgtagccca
aatctcactcccagtcccatcctagccaacactagagagccgctggtccacattggcatc
ttccagtgtgagtccactggtggatctcagtggattctagagcagactatcgttctggac
agcacagatcccacaactggaagtgccaatattcctggtaacttggacttgccgatgcct
aacgaggaggactgtcctggttctattagtaagagccaggttcatttggactgggtctcc
caagaagatggatcacatattctcactgttggtattgggacaaagatttatatgtacggc
cgtctgtctgggaagcctccagaactctgtttgacatctgatgcaagtagagaccagagc
ttgtctcgcctggttctgcttcgatccgttgatcttgtctcctctgttgaaggatcctta
cctattccagtctccctctcctgggtaagagatggcatcttggtagtaggcatggactgt
gagatgcacgtctactcccagtggcaacccccagcaccacccaaacccaatcccgtgatt
gcccaagacacagacatcagcagcagtgtgtcctctataatctcagccgtcagacagagt
caggaggaagggctcagtactgggacaaccatgtcttcactggcccctcccaaaaaggcc
ctgacaagatcaatgatgagcctggcacagaaactcagtgggaagagaacagcgtatgac
ctccctgcagagatggaagattctgggctttttgaagcagctcaccaactctttcccact
ctgccccagtaccaccctgtacatttattggagctcatggatctagggaaggttcaccgt
gccaaagccatcctctcccacctggtgaagtgcattgctggagaaattgttgcacttaaa
gacagtaccaccaatcctgagaaacgtgtgcgttctcgaaccatcagcgccggaggcagc
acagccagggatctgaagatgttctgcaaagcagagaactctacccctgactacacagag
ataagctccatccctcccctgcctctgtacgcccttcttgcagctgatgaggatacttca
ccaaaacctgataaagtgggcagtgtgagtggagatagtgggcatggttccagtcacacg
gatgtttatgatgagctgtttcatacacccagcattgcagacctggaccctctggaagac
aatcaagaggaaactgggaacaaggtaattgacctgtcccagtacagtccaacattcttt
ggtccagagcatgcccaggttctgtccagtcatcttcttcattccagtttgccaggctta
acccgtatggagcagatgtcccttatggcactggccgacaccatcgctaccacaagcaca
gacctcaaggacagccagggcaagagcaaaggtggcgagacactggatgagtgtggttta
aagttcttgcttgccgtcagactccacaccttcctctctacctccctgcctccagcacat
agagcacagctactacggcaaggcctgtcaacatgtcattacgcctgggccttccactct
gaggctgaggaggagctgctgaacatgctgcctgccctacagaagggagagcccacctgg
cctgagctgcgctcaatgggtgttggctggtggctgcgcagcaccaacaagctacgcagg
tgtattgagaaggttgccaagacttctttacagagaaacaatgatcctctggatgcagcc
atattttatcttgcactgaaaaagaaagcagtggtctggggattgtacaggtctcagaac
aatgctaaaatgacagagtttttccgcaacaacttcaatgaggaccgttggaggaaagca
gcactgaaaaatgcgttttctctgttgggaaagcagcggttccagcattctgcagccttt
ttccttctagccggctccctcaaggacgctgtggaggtgtgtttagagaaaatgcaggac
ctacagcttgccttggtgatctctagattgtatgagtctgagtttgagatgtcgtccacc
tacaaaaagatccttcagagacatgttctgggacaagacaaacagattcaagcccaccaa
gaccccttcctgcggagcatggcttactgggtcctggaggactacagcagagctttggac
actctacttgagcaacctgctaacagcaccagctctgggtccgctgagagcaaatgcaat
gcaggttcctcttctgtgtctgcatgtaatcctgaggttttcaacttttacacctacctt
cgtacccacccactcctccttcgccgccatttcggctcttcagacaaggctaaagttgga
ctgaccgctgagggtcgcagggctgactccatcagcctggaggagaggaagctgtttttc
acagctgcatatgcacacctgcaatctggctgccccatgctagcacttgaagtcctctca
aagatgcccaaagtccgcaagcattctaaactcccccaccaggaggatacaagcactgct
gccgaactcagtgttgagagcaagaatggccaaacgttggagccggattggtctcagccg
gctctaaacggctacgagtcagacacaaacagcttatctaacagccggtcagattcagtg
ttaagttttgactggagccagccttcattggtgcgtgcagacgagtcactggagctgaag
tgggatattgacaaagatgatgatgacaatgaagaagaagatgaggatgaagaagaaaat
aaaaatgttaagagcggtagaagtgcagatagcagcagtgtgttccaggacacacaagat
gccatctcaccattaatggagactgtgacaagagaagactgcaatgacttcctggatcca
tctaatgacaccttggcggcccagctcaagtttactgcctgcttgaagattatgaccaat
gagctccggacgctgtcgacggggtatgaactggatggagggaagctacgttgccagctc
taccagtggttggaaagagaggtggttgctctccagcgttgctgcagctacaagcccttc
tttccagagctgtctgcccagggtgatgcccctatttctgggttggtggaggaggaacag
cccgggagtcctcgtggtgacagccagaggagtaggagacactggctgcagagcaaccag
cacttactgaggatgtttttgagctactgcagcttgcatggctcccacggtggaggactg
gcctcggtgcgcatggagctcatattattgcttcaagagtctcaccaggatgacaccatc
cagtctgcagtgatgccatgtcaaccaacttctattcctcttctgatggcttgcacggcc
aacgtaaagacagtggttgccaatcctattgtctacctgactaacatggctcatgacatc
ttgcagaccatcaattcacttgactctcctccacatcccgatgttgttaacaatgagatc
tatgtgatgcacacgttggctgcctctctgtcagcttgtatatatcagtgtctgtgtgat
ggacacacccacagccatgtgaaccatttcacaggaatcgtgtatcagagtgttttgctg
tctcagaagcagccagtcagaactgtcagcatggatgagtctgttcagcccaacacttct
cctgcacagtggccaggtatagcctctctgattcgcctgttgagctcagcaggcgaggag
agccagccaggcttaactgtgctgctctgtgagattctgactgctgtcttcctcagtctg
tttgttcacggcatggccactcactctagcaatgaactgttccgcatagtagcccacccc
ctcaacagcaagctttgggtgacagtatttggaggaggcgcccggagccctgtcatagag
aaaccaaacagcccaatgagaacacccccaccagcctcaccaagtggctcagaaaggaag
tccaggcgattcaggcttctgtcatcacgcagtggatccaaggaagagtctggaatagag
cgggggtgcccctctattcctaaagatgaccacgtagtagaaaatgaagccacctccatc
tttaaagaacgatttgtccctccagagctcagcgtttgggattactttatcaccaagcct
tcactgccaccatcagaaaacagaattgaatatgactcagaggagagccagggcagtcaa
gatgaagaggaagatgattgtcaatatgaagatgtgtttgaccccagctctccgcaaaga
gagcattcaaaccacaattcatacagttggtgtttgatgcgtctggcaatggttcaactg
gtgttggtcaacctcaagtccttttacccaatggcaggatatgatctattagaactgcct
gtgggctctcctctgtgtcacgctgtgctgaagacactgcagcgttgggagcagctgctg
cagaaaaggctggagattttcgggggccccccttccaagtacatctccaaccccctccag
gatgaaaccgccgcaccgggccccgccctgcttagacacaaggctctgtttgaaccatcc
aacacccctttcaggactagtcaccattcagcactgccagagaagcgtctgtggcagttt
ttggtcaagcaggaagaagttcaggagactttcataagaaacatctttaccaagaaacgg
gacacaaatgagttgggtgaggaccagactgacaatgtgaaatgttcagggatggaggag
acaggaaactatcagactgagacggatctgggctctccgggaggaaaggcacgcatcatc
cacaaggaatctgacatcatcacagcctttgccatcaacaaggcaaatcgtaactgttta
gtcatggcctccacccatgacattcaggagttggatgtgtcatccatcttggccacacag
atcttgacatggattgatgatgatgatgcagaagccaaaggtgcttgtagtgatgacttc
ctggtggttcatgcacgtgatgactttaccgccctccacggcaccacaccgtacactcac
agtagccccggcacacccatccacatgccgtggctgggaggagtgcagacaggccgcggt
gcagctgtgatgatcaagagaaatattaacaacgtgagaagaatgacctcccatcccaca
ctgccttactacctgacaggagctcaggatggtagtgtcaggatgtttgagtggggccac
tcccagcagatcatctgcttcagaagtccaggcaactccagagtcaccaggatacgattc
aaccaccagggaaacaagttcgggatcgtcgatgctgatggaggtttgagtctctggcag
accaacacaagtgggactgcacctaaaccatacctaacgttgcagtgccacaacaagaca
gctaatgactttgtctttgtgggctcctcctccctcattgccactgcaggtctttcaaca
gacaacaggaatgtgtgtctatgggacactctggtgactcctgcaaacagccttgtacac
gctttctgctgccatgaatccggagcgacggtgctcttgatggcctccaggcagcagctg
cttatcaccggtgggaggaagggctggattagtgtcctggagctcgcccacaggcaccag
cgtcagagcttccaggcccacgactcgccggtcaaagctctggctgtcgatccgactgag
gactgctttatcagcggatcagctgagggcaacatcaagatctggagcctggccacgcat
tgtctgctctacacctttcccaacgaacacgctcgccagtccatgttcaggaacctcggc
acgggtgtcatgcagatagaggtgggaccgtccaatcacatcttctcctgcggcgccgac
ggaaccatgaagatgaggtgcctccccaaccgctttagtgtcgccaataacaacaacaac
catggcaacctcaagatcgatgtcaagttcatcgtatag
DBGET
integrated database retrieval system
