Etheostoma cragini (Arkansas darter): 117944366
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Entry
117944366 CDS
T07493
Name
(RefSeq) transducin-like enhancer protein 1 isoform X1
KO
K04497
groucho
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04310
Wnt signaling pathway
ecra04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117944366
04330 Notch signaling pathway
117944366
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecra04812
]
117944366
Cytoskeleton proteins [BR:
ecra04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
ADF / Cofilin
SCMC complex
117944366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TLE_N
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Beta-prop_IP5PC_F
HALZ
WD40_RFWD3
COG3_N
Motif
Other DBs
NCBI-GeneID:
117944366
NCBI-ProteinID:
XP_034726995
LinkDB
All DBs
Position
5:10350243..10370750
Genome browser
AA seq
781 aa
AA seq
DB search
MFPQGRHPTPHQAQGQPFKFTIPESLDRIKEEFQFLQAQYHSLKMECEKLASEKTEMQRH
YVMYYEMSYGLNIEMHKQTEIAKRLNTICAQVIPFLSQEHQQQVVQAVERAKQVTMAELN
AVIGVRGLPGLPPTQHLSHNHGGAPVPHTPHPAGLPPSQLGGSAGLLALSGALGAIPPHM
LGKEDKKAHMSGPDSHQSGPEHLREREPSTSNSLLPESLRNSDKRRNGPEFSNDTKKRKV
DDKDSSHYDSDGEKSDDNLVVDVSNEDPASPRGTPLPSPRENGLDKARLLKKDPCSPAST
ASSASSSSLKSKEMTMRDKAGTPGLKSSTPTPRGDSTPGPSSTPGIRPNLSKPPSMEIPH
PATAGLRTPMAVPGPYPGAFGMLPHAAGMNGELAGAAGAAAYAAGLHNMSPQMSVAAAAA
VAAYGRSPMVGFDPHSHMRVPGMPPSLSGIPGGKPAYSFHVAADGQMQPVPFPPDALVGP
GIPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNR
DNYIRSCRLLPDGRTLIVGGEASTLSIWDLATPTPRIKAELTSSAPACYALAISPDSKVC
FSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGR
QLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVTKPDKYQLHLHESCVLSLQFAYC
GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVI
Y
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgtttccccaggggcgacacccgacgccccaccaggctcaaggccagcccttcaagttc
accatcccagagtcactggaccgcatcaaggaggagttccagtttcttcaggcacagtac
cacagtctcaagatggagtgcgagaagctggccagtgaaaagacggagatgcagagacac
tatgtcatgtactatgagatgtcttatggcctcaacatcgaaatgcacaagcagaccgag
attgccaagagactaaacaccatctgtgcacaagtcattcccttcctctcgcaggagcat
cagcagcaggtggtccaagctgtagagcgagccaagcaggtgactatggcagagctaaat
gctgtcatcggggtacgtggactgccaggccttccacctacacagcacctatcccataac
catggtggtgcccctgtgccccacacccctcaccctgccggcctccccccctctcagcta
ggcggttcagctggtctcctggctctatcaggagcacttggtgctattcctccccacatg
ttgggaaaagaagataaaaaggcccacatgtctggaccagactcacaccaatcaggacct
gagcacctgagagagcgagagcccagcacaagtaactcattgcttccagaaagtcttagg
aactcagataagcgacgcaacggacctgagttttcaaatgacaccaagaaacgcaaggtg
gatgacaaggactctagccactatgacagcgacggggagaaaagcgatgataatttagtg
gtcgatgtctcaaatgaggatccagcctcccctcgtggcacgcctctcccctcccctaga
gaaaatggcctggataaagcccgtcttctgaagaaagacccctgtagtccagcttctact
gcatcatcagccagctcttcttccctcaagtccaaagagatgacaatgcgagacaaggca
ggcacacctggactaaagtcaagcacacccacacccagaggtgactccacccctggtccg
agctccactcctgggatccgacccaatctatcaaaacccccgtccatggagataccacat
ccagccactgcaggtttgcgaacccccatggctgtaccaggcccatacccaggtgcattt
ggtatgttgccccacgcagcagggatgaacggggagctggcaggtgcagccggagctgca
gcctatgctgctggcctacacaacatgtcacctcagatgagtgttgctgccgcggctgct
gtggctgcgtacggccgttcacccatggttggatttgatcctcattctcatatgagagtt
cctggaatgcctcctagtctgtcaggaatcccaggtggcaaacctgcttattcttttcac
gtggcggccgacggacagatgcagccggtaccgttcccaccggatgctttggtgggccca
gggattcctcgccacgcccgtcagatcaacacactgaaccatggagaggtggtgtgcgct
gttaccatcagtaaccccacccggcacgtttacacaggagggaagggttgtgtcaaggtc
tgggacattagtcacccagggaacaagagcccagtgtcgcagctggactgtctgaaccga
gacaactacatccgctcctgtcgtctccttccggatggtcggacgttgattgtgggaggt
gaggcaagcacgctgtcaatctgggatttggccacgcctactcccaggattaaggcagag
ttaacatcatcagcaccagcgtgttacgctctggccatcagcccggactccaaggtctgc
ttctcttgctgcagtgatggaaacatcgcggtctgggatttacacaaccagacgctcgtt
aggcagttccagggtcacacagatggagccagctgtattgacatctccaatgatggcact
aagttgtggaccggaggcctcgataacacagtccgctcctgggatcttagagaagggcgg
cagctgcagcagcatgactttacatcacagatcttctctcttggctactgtccgacagga
gagtggctcgctgtgggaatggagagcagcaacgttgaggtccttcacgtcaccaaacct
gacaaataccagcttcatctacatgaaagctgtgtactctccctgcagtttgcctattgt
ggtaaatggtttgtgagcacaggaaaggataacttactaaatgcatggagaacaccctat
ggagccagcatattccagtctaaagaatcatcctcggtgttaagctgtgacatatctgta
gatgacaaatacatcgtcactggttcaggggacaagaaggccactgtttacgaggtcatc
tactaa
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