Etheostoma cragini (Arkansas darter): 117944408
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Entry
117944408 CDS
T07493
Symbol
snx2
Name
(RefSeq) sorting nexin-2 isoform X1
KO
K17917
sorting nexin-1/2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117944408 (snx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117944408 (snx2)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
117944408 (snx2)
Membrane trafficking [BR:
ecra04131
]
Endocytosis
Macropinocytosis
Sorting nexins
117944408 (snx2)
Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117944408 (snx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
BAR_3_WASP_bdg
GrpE
DUF3557
V-ATPase_G
HR1
MetOD2
Motif
Other DBs
NCBI-GeneID:
117944408
NCBI-ProteinID:
XP_034727084
LinkDB
All DBs
Position
5:complement(27837830..27865931)
Genome browser
AA seq
513 aa
AA seq
DB search
MADIARDPPPQHTDFHELENGEDLFPEPVATLESEPASLPAEDISTNSNGPKQDSLFDDD
PEDLFAEATEEVSLDSPERDVLLSDGPSPAITPITPPTSVLTPRIGLHDDMFTHSSFDEI
EDEEEASDSFDMHISVSDPEKVGDGMNAYMAYKVTTKTSISLFKSHEFSVKRRFSDFLGL
HSKLASKYLHIGYIVPPAPEKSIVGMTKVKVGKEDQSSNEFVEKRRSALERYLMRTVKLP
VLLKDPDVLQFLESSELPRAVSTQALSSAGLLRMVNKAAEAVNKMTIKMNESDAWFEEKQ
QHFENLDVQLRKLHASMESLVLHRKELSVNTAQFAKSAAMLGNSEDHTALSRALSQLAEV
EEKIDQLHQDQANADFYLFSELLGDYVRLITAVKGVFDHRMKTWQKWQDSQMLLQKKREA
EAKLQLNNKPDKLQQAKDEIKEEIEELEGKVEQGEREFEQISKTIRKEVSRFEKERVKDF
KTIIIKYLESLVQTQQQLIKYWDAFLPEAKAIS
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcggacatagccagggaccctccaccgcagcacaccgacttccatgagcttgagaac
ggggaggacctgttcccagaaccggttgccacactagagtcggaaccagccagtctacct
gctgaggacataagcaccaactcaaatggaccaaaacaggattcactgtttgatgatgat
ccagaggacctatttgcagaggccacagaggaggtttcgttggacagtccagagagagac
gtcctgctgtctgatggcccttcgcccgccatcacccccatcacccctcccacctccgtc
ctcacacctcgcatcggccttcacgacgacatgttcacacactcctcctttgacgagatt
gaagacgaggaggaggcaagcgattcatttgacatgcacatatcagtgtctgaccctgag
aaagtgggtgatgggatgaatgcgtacatggcctacaaagtgacgaccaagacctccatt
tctctgtttaagagtcatgaattttcagtaaaaaggcgtttcagtgattttctgggtctg
cacagtaaactggcctccaagtatctgcacataggctacatcgtcccccctgcgccggaa
aaaagcattgtggggatgactaaggtgaaggtggggaaggaagaccagtcgtccaacgag
tttgtggagaagaggaggtcggcacttgaaaggtatttgatgaggacagtgaagctcccc
gtcctgctgaaggatcctgacgtccttcagttcctggagagctcagagttgccgcgggcg
gtcagcactcaggctctgagcagcgccggacttctccggatggtcaacaaggccgccgaa
gccgtcaacaagatgaccatcaagatgaacgagtcagacgcttggtttgaggagaagcag
cagcattttgagaatctggatgttcagctgaggaaacttcatgccagcatggagtccctg
gtccttcacaggaaagagttgtcggtgaacacggcgcagttcgccaagtcggcagccatg
ttggggaacagcgaggaccacacagctctgtcccgagctctgtcccagctggccgaggtg
gaggagaagatcgaccagctgcaccaggatcaggccaacgcagacttctacctcttctcc
gagttactgggtgactacgtccgcctcatcaccgccgtcaagggtgtgtttgaccaccgt
atgaagacgtggcagaagtggcaggacagtcagatgctcctgcagaagaaacgagaagct
gaagccaaactgcagttgaacaacaaaccggacaaactgcagcaggccaaagacgagatc
aaagaggagattgaggagctggaggggaaggtcgagcagggagagagggaatttgaacaa
atctcaaaaactatacgcaaagaagtcagcaggtttgagaaagagagagtgaaggacttt
aaaacgatcattatcaaatacctggagtcactggttcaaacacaacagcagctgataaaa
tactgggatgccttcttacccgaggccaaggccatctcatag
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