Etheostoma cragini (Arkansas darter): 117944485
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Entry
117944485 CDS
T07493
Symbol
ncor2
Name
(RefSeq) nuclear receptor corepressor 2 isoform X1
KO
K06065
nuclear receptor co-repressor 2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117944485 (ncor2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecra03036
]
117944485 (ncor2)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
117944485 (ncor2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
PRP38_assoc
DUF4820
DnaT
DUF4518
Motif
Other DBs
NCBI-GeneID:
117944485
NCBI-ProteinID:
XP_034727197
LinkDB
All DBs
Position
5:18348546..18459896
Genome browser
AA seq
2457 aa
AA seq
DB search
MSSHPQSVPPGRRTVDTRHLPNPASLPLQLQRAHTEVGLVDYHSHHARDYSSHLNQPHRR
RPSLLSEFQPGNERGQEQHIRYEHMYLQEASSQSEVEYGELKRPRLEMGPESMMRPSSHR
PQLPMGGSEDMGKDRGSGMGKLEPISPVSPVHMDPDLDLVPARFSKEELIQNMDRVDREI
TMVEQQICKLRKKQQQLEEEAAKPHEPERPISPPPSEAKHRSLVQIIYDENRKKAEEAHR
ILEGLGPRVELPLYNQPSDTKQYHENIKINQAMRKKLILYFKRRNHARKQWEQKFCQRYD
QLMEAWEKKVERIESNPRRRAKESKVREYYEKQFPEIRKQRELQERMQSRVGQRGGGLTS
SAARSEHEVSEIIDGISEHENTEKQMRQLAVIPPMLFDAEQQRIKFINMNGLMDDPMKVY
KDRQVMNMWSEQEKDTFREKFIQHPKNFGLIASFLERKTVAECVLFYYLTKKNENYKNIV
RRNYRRRGRSQHGQQQQQQQQQQQQQQQQPVHRGSQEEKEKEEKEKEAERDEEKNEAEDK
EDGMKDDTSGEDAEDKEPTVAFKGRRTANSQGRRKGRITRSMTSEVEETTTPPLNNELAN
LEMNESSRWTEEEMETAKKGLLQYGRNWSAIAKMVGSKTVSQCKNFYFNYKKRQKLDEIL
QQHKMKSEKERKARRRGKALQNEETSAPYTAEEEEMMEGSGASGNEEEAPEDGEGGANNS
SDTESLPSPHSSEDSKAKEEGSGRSKASSTTGDKEASGSDIGQAGDEKPPVKEDGESAIK
QEIKTETGEPNKDQLQPTPPSDAIDKKPSTAEMEDVKSSTKSSKKHHGPNAGSRDSDSSA
TCSADEVEETDTDKNRMNSPRPSLLNYAHDGVISSTLQKPMDLKQLKQRAAAIPPIMPEA
SMQGGQRSGGGKAVLPPHALALYQQQITMAHGESSQEVKMLQQQQLSGQPGKQQPYTSQA
DGDREALHSSSPRIHLHSPSTSDKDELEGNERWLLTLLQGLKKSRAFSPHGEAKKQALGP
DDMRTSNLGRPVLSRYPMSPRDMAKITHDQHLLHFNSFQQTGHPSLPNLPQDSGRLAAVR
PVTMPEPPPLISSTKPGGSITQGTPVQLHSPAHGLDHGKMTPTQMGLSWMDQRKVAGPFP
VIKQEQLSPRSLSSQGDMSTQGSPHDSAAGRGSIPAVQGGSITKGIPGTRMHPDSSISYR
GGSITQGTPADVLYKGTITRLITEDSASRAERERDEALSKGHVVYEGISGHILTYDRPPS
QPPKDEGRGPGQSGEILGLKRPYDIMEGGISRGLPMRDSLSAANCEGLIGRAMPHDRDSP
HHTPYKDAHHIRGSISQGIPRHLDPQDGYLRRDAKQMKREGSPPRGPGSLSDPMKGRETM
VPTVKEAGRSIHLIPREELRQPTKEVIIAQGTPMKQEAAASSKRHDVRSIIASSPRSYHN
ATSHLEMRAERGRYEEAPKGRPSAVVSTASTIARSSPLTLGSEQGSKTHHSPVGYEDKGA
LRAPYPGPSHRGSPLSREASQRQHDGSSKNPSQERKATPTPREMSATKSPLQGVPDQQTY
ERLLQGLGAADVYRQIPIAFDPASLPRGIPIDPAAYYLPRHLAPNPAYPHPYPYLIRSFP
DTAALENRQTLLNDYITSQQMHQWPAAAAMAAQRSDLLRGLSPRDQPLPLSYSAAPRGII
DLSQVPHLPVLVPPSAGAAGSPMDRITYIPGGTTNFPGRPYTTSPISPVGSSHINKMQGT
SSERERERDRERDRERERDRERERERERERDRERERERDRERERDRDRERDRDRDRERDR
EKGGSLGNVEHAPIWRPGTEHSLASSSSSSVRPSSQTYSHQHSPVSPRTQENVQQRPSVL
HNTGGKSLSVSEHSSPSVFRSMSSGPARYQGYPGHLQRTGLPPEAYPPAMDSSGAKEQSR
DGGKARGGLPKHVQDQHGPSSKSDPKLSCPSPGGMYPGSYPSASGRPQHLLPPQSDNPGR
GESGTPSREKTQNKPMSIQEQELRALGKTTMTAANFINAIIMRQISCETGMAETGSLVAS
CATDAQQKMEPHGLYRPPSEERLSPGQQPPSPCVKGSQRVVTLAQHISEVITKDYTRQSQ
QSQQQQQQQSYHGSPVLDLTRPLSASKPPPTSQDSVQGSRYPEGLGGERNRDRSPPQPKT
SPVSVSNDGIEPVSPAGASSEPEVQGGASSSNEQGEQGMGSRSPHNTSQPPAFFSKLTES
TSAIVKSKKQEMIKKMTVVGNEVDFNAGQPGTEIFNMPASTNAGPMNVRCHPAPETPGNS
IGLEAIIRKALMGKYDDQSEERSPSNAANQMGSGVSVGMPVADGRVEDFFSQGGGKSSKG
SGRSNGRKAKSPGPGLSGGERPSSVSSVHSEGDCNRRTPLTNRVWEDRPSSTGSTPTPFP
CNPLIMRFPSGTVSAPSPSSGQLGGQGTGPGPGQGRTWEEEPKPLLMSQYETLSDSE
NT seq
7374 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctcatccccagtcggtgccgccgggccggaggactgtggacacacggcacctg
ccaaacccagccagtctacccctgcagctgcaacgggcacacacggaagtgggactggtt
gactaccactctcatcatgccagggactacagctcccacttgaaccagccccatcgccgc
cggccctccttgctttcggagtttcagcctgggaatgagagaggacaagagcagcatatt
cgctatgagcacatgtacctgcaagaggccagcagccaatcagaggtggagtatggagaa
ctcaaacgccctcgtttagagatgggaccagagtcgatgatgaggccttcatcccaccgg
ccacaattgcctatgggagggtctgaggatatgggaaaggaccgtggtagtggaatgggg
aagctggagccaatctcccctgtgagcccggtccatatggaccctgacttggatctggtg
ccggctcgcttctccaaggaggaactgatccagaacatggaccgcgtggacagggagatc
accatggtggagcagcagatctgcaagcttcgcaagaaacagcaacaactagaggaggag
gctgcaaagccacacgagccagagcggcccatctcaccgccacccagcgaggccaagcac
cgcagcctggtgcagattatctacgatgagaacaggaaaaaggcagaagaagctcacagg
atactggagggactgggacccagggtagaactgcctctgtacaatcagccttctgatacc
aagcagtaccatgagaacatcaaaataaaccaggcaatgaggaagaagctcatcttatac
ttcaagaggagaaatcatgctcgtaagcagtgggaacagaaattttgccagcgctatgat
cagctgatggaagcctgggagaagaaggtggagcgcatcgaaagcaacccgcggcgccga
gcaaaggagagcaaggtgcgggagtactacgagaaacagtttccagagatccgcaagcaa
agagagctccaggagcgcatgcagagccgtgttgggcagagaggaggtgggctgacctct
tctgcagctcgcagtgaacatgaggtttctgagatcattgatggcatatcagagcatgag
aacacagagaagcaaatgcggcagctggcggtcatccctcctatgctgtttgatgctgag
cagcaacgcatcaagttcatcaacatgaatggattgatggatgaccccatgaaggtgtac
aaggaccggcaggttatgaacatgtggagcgagcaggagaaggacactttcagagagaag
ttcatccagcaccccaaaaactttggtctgattgcgtcttttctggagagaaagacggtg
gcggagtgtgtgctcttttactacctgaccaaaaagaatgaaaactataagaacatagtg
cggaggaactacagacgcagaggaagaagccagcacggccagcagcagcagcaacagcag
cagcagcaacagcagcagcaacaacaaccagtgcatcggggcagccaggaagagaaggag
aaggaggagaaagagaaggaggcagagagggatgaagaaaaaaatgaagctgaagacaag
gaagatggaatgaaggacgacacctctggagaagatgcagaggacaaagagcccaccgtg
gcttttaagggtcgacgcacagccaacagccaggggcgacgcaagggccgcatcacccgc
tcgatgaccagtgaagtggaggagaccaccacaccgccactcaacaatgagcttgctaat
ctggagatgaatgagagctctcgctggactgaagaagagatggaaactgccaaaaaaggc
cttctccagtatggtaggaattggtccgccatcgccaagatggtgggatcaaaaaccgtg
tcacagtgcaagaacttctacttcaactacaagaagaggcagaaactggatgagattctg
cagcagcataaaatgaaatcggagaaagagcgaaaggcccgccgtaggggcaaagccctg
cagaatgaggagaccagtgccccgtatacagcagaggaggaggagatgatggagggatca
ggagccagtggcaatgaagaggaggcccctgaagatggagaaggtggagccaacaacagc
tctgacacagagagcttgccctcgccacactcatcagaggacagcaaggctaaggaagaa
ggctcgggcaggtcaaaggccagctccaccacaggggacaaagaggcgtccgggtcagac
attggccaggcaggggatgaaaagccgccagtcaaggaagatggagaatcagccatcaag
caggagataaagactgagacaggggagcccaacaaagatcagctgcagccaacaccaccc
agcgatgccatagataaaaaaccttctacagcagagatggaggatgtcaaaagctccacc
aagagctccaagaagcaccatgggccaaatgcaggttcccgtgacagtgactctagtgcc
acttgcagtgctgatgaagtggaggagaccgacacagacaaaaacagaatgaattctcca
cggccaagtcttctaaactacgctcatgatggagtcatatcctcgacactgcagaagccc
atggacctgaaacagctcaaacagagggctgctgctataccacctattatgccagaagcc
tcaatgcagggcggtcagcggagtggaggtggtaaggcagtgctgcccccccacgccctg
gcattgtaccagcaacagatcaccatggctcatggggagtcctctcaggaggtcaaaatg
ctgcagcagcagcagctttcaggccagccaggcaagcagcagccatacacctcgcaggca
gacggagacagggaggctcttcacagtagcagtcctcgtattcacctgcacagcccctcc
accagcgacaaggatgagctggaaggcaacgagaggtggttactgaccctcctgcaggga
ttaaaaaagtcccgggctttctctccacacggtgaagccaagaagcaggcactgggccct
gatgacatgaggacctccaacttgggtcgaccagtgctgtcccgctaccccatgtccccg
cgagacatggccaagatcactcacgaccagcatctgctccacttcaactcgttccagcaa
acaggccacccctcccttcctaatctgccacaggacagtgggagactagcagcagtgagg
cccgtcaccatgccagagcctccgccactcatttcctccaccaagccaggaggctccatc
acacagggcacgccagtgcagttgcacagcccagctcatgggttggaccacgggaaaatg
acccccacacagatggggttgtcttggatggatcagaggaaagtggcaggtcctttcccc
gtgataaagcaggaacagttgtcacctcgcagcttgtcctctcaaggtgacatgtcaacc
caaggctcgccgcatgatagtgctgctggacgtggttctattccagctgttcagggggga
agtatcactaaaggtatcccagggaccagaatgcatccagattcctcaatctcctatcga
gggggttccattactcaggggacaccggctgatgtgctttataagggaaccataacccgc
ctgatcacagaggacagcgccagccgtgctgagagggaacgggatgaggccctgtctaaa
ggtcatgtggtctatgagggcataagtgggcacattcttacatatgaccgccctccttct
cagccccctaaagatgagggccgaggccccgggcagtctggggaaattctaggcctgaag
cgtccttatgacattatggagggaggcatctctaggggactgcctatgagggattcactg
tcggctgccaactgtgaaggtctgattggtcgagccatgcctcatgatagggacagtcca
caccacacaccttacaaggatgctcatcacatccgtggttccatctcacaaggtatacct
cgtcacctggaccctcaggatggctacctgaggagagacgctaagcagatgaagcgagag
ggctccccaccccgtgggcccggttcactttccgacccaatgaagggcagagagaccatg
gtgcctacggtgaaggaggctgggcgctccatccacctcattcctagagaggagctgaga
caacctaccaaggaggtcatcatagcacagggaacacctatgaagcaggaggcagctgct
tcaagtaaacgtcatgatgtccgctccatcatagccagttcaccacgttcctaccacaat
gcaacctcccacttggagatgcgtgctgagaggggccgctacgaagaggcaccaaaagga
cggcctagcgcagtggtcagtacagctagcacgattgcacgctcttctccgcttacattg
gggtcagagcagggaagcaagacccatcatagtccagtgggctacgaggacaagggcgcc
ttgagggccccttaccctgggccttcgcaccgtggttcccctctgtccagggaggcaagc
caaaggcagcatgacggttccagtaagaatccttctcaagagcgcaaagccacaccaacc
cccagggaaatgagtgccaccaaatcaccactccaaggtgttccagatcaacagacctat
gagcgtctgctgcagggtcttggggctgcggatgtttaccgtcaaatccccatagccttt
gatcctgcgtcactgccccgtggcatccccattgacccagcggcatactacttgcctcgt
catctagcacccaacccggcctaccctcatccctacccctacctcattcgaagctttcct
gacactgcagccctggagaaccgccagacgctgctcaatgactacatcacctcccagcag
atgcatcagtggcctgcagctgctgccatggccgcccagcgctcagacctgctgaggggc
cttagtccacgagaccagccccttcctctctcctactcagcagccccacgcgggatcatc
gatctttctcaggtgccacacttacctgtcctggtccctccttctgcaggggcagccggc
tccccaatggatcgcatcacgtacattcccggggggaccaccaacttccctggcaggcct
tacaccacctcccccatctcacctgttgggtcctcgcacataaacaagatgcaaggcaca
tcttcagaacgtgagcgtgaaagagaccgggaacgtgaccgagagagggagagagacaga
gagcgagagagagagagggagcgtgaacgcgaccgagagagagaacgggagagggaccgg
gaaagggaaagggaccgggacagagagagagaccgagaccgagacagagagcgtgacaga
gagaagggcgggtctcttggaaatgtggagcacgcaccaatctggcgaccaggtacagag
cacagcttggcaagcagcagcagcagcagtgtgagaccttcctcccaaacgtatagccac
cagcattccccagtgtctcctcgcacccaggagaacgtgcagcagaggccaagtgtcctg
cacaacactgggggcaagagtctttctgtcagcgaacactccagcccatctgtgtttcgg
tccatgtcctctggaccggcccgctaccaaggttaccctggccacctccaaaggacaggt
ttgccccctgaggcctacccacctgccatggactcaagtggagccaaagagcagagtcgc
gatggaggcaaagccagaggtggtctacctaagcacgtgcaggaccagcacgggccctcc
agtaaatctgaccctaagttgtcctgccccagcccaggaggaatgtacccaggttcctat
ccctcggcttcaggccggccccagcacctgctgcctccccagtcggataaccctggccgt
ggagaaagcggtacacctagtagggaaaagactcaaaacaaaccgatgtccattcaggaa
caagagctccgagcactcggtaagaccacaatgactgcggccaacttcataaacgcgatt
attatgcgtcaaatttcttgtgaaacggggatggcagagacgggctcgcttgttgccagc
tgcgccactgatgctcagcagaagatggagccacacggtctgtaccgtcctccatctgag
gaaagactgtccccaggccaacagcccccatccccctgtgttaaaggcagccagagggtg
gtcaccctggcacagcacatcagtgaggtgataactaaggactacacaaggcagagccag
cagagccagcagcagcaacagcagcaaagctaccacggctcgcctgttctggatttgacc
cgtccactcagtgcctccaagcccccacccacctcacaggactctgtccaagggtccaga
tatccagagggccttggtggagaacgcaacagagaccggtctcctccccagcccaagaca
tcgcctgttagtgtttcaaatgatggcattgaaccagtgtctcctgctggagccagctct
gagcctgaggtccagggaggggcctcctcctccaacgaacagggggagcaaggaatgggc
tcccgttcccctcacaatacctcccaacctccagctttcttcagcaagttaactgagagc
acctcagctattgtgaagtcaaagaaacaggagatgatcaagaagatgactgtggtggga
aatgaggttgatttcaatgctggtcagccaggaaccgagatcttcaatatgccggcgtct
acaaatgcaggacctatgaatgtccgctgccacccagctccagagacacctggtaactca
ataggcctggaggccattataagaaaggccttaatgggcaaatacgatgatcagtcggag
gaacgctctccatccaatgctgctaaccagatgggctccggtgtatccgttggtatgcct
gtagccgacggacgtgttgaagactttttctcacaaggtgggggaaagtcctcaaagggc
agcgggcgctctaatgggcgcaaggccaaatctccaggaccaggcctgtcagggggggag
agaccatcctctgtgtcctcagtccactctgagggagactgcaacagacgaactcctctt
accaaccgtgtctgggaggatcggccttcatccacaggttcaactccaactcccttccca
tgtaacccgttgataatgcgtttccctagcgggacggtgtccgctccctcaccctcctcc
ggccagctggggggtcagggcaccgggcctgggcctggacagggccggacctgggaggag
gagcccaagcctctgctcatgtctcagtacgagaccttgtctgacagcgagtga
DBGET
integrated database retrieval system
