Etheostoma cragini (Arkansas darter): 117944500
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Entry
117944500 CDS
T07493
Symbol
lgi3
Name
(RefSeq) leucine-rich repeat LGI family member 3
KO
K19999
leucine-rich repeat LGI family member 3
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117944500 (lgi3)
Membrane trafficking [BR:
ecra04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
117944500 (lgi3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_5
LRR_4
LRR_9
LRR_1
LRR_14
LRRCT
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-GeneID:
117944500
NCBI-ProteinID:
XP_034727238
LinkDB
All DBs
Position
5:complement(18535851..18543461)
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AA seq
548 aa
AA seq
DB search
MLELGQRWTRLICLSLLCLCLFLPRESEARRAPKIPRCPATCSCTKDSAFCVDTKAIPKS
FPPGIISLTMVNAAFTTIPEGAFSHLHLLQFLLLNSNTFTMIADDAFAGLSHLQYLFIEN
NDIQALSKYTLRGLKSLTHLSLSNNNLQQLPRDLFKHLDILTDLDLRGNSFRCDCKIKWL
VDWMEKTNTSVPAIYCASPFEFQGRRIHDLAPRDFNCISADFAVYETFTFHSVSVESYEF
NEDQFVVFAQPDSGFCTLYVWDHVEMVFRMFHNITSRSAVYCKPVVISNSLYMVVAQLFG
GSHIYKWEEDPQRFVKIQDIDTTRVRKPNFVDTFQLDEEWYFVVADSSKAGSTSIYRWNS
NGFYTHQSLHPWHRDTHVEFVDVGGKPHLILSSASQPPVVYQWNRGQKQFAFFSQITELA
DVQMVKHFWVRKVLYLCLTRFIGDSKILRWEGQRFVEIQTLPSRGSMAVYPFTVGLRQYL
ILGSDFSFSRVYLWDDLTQRFQPFQELNMRAPRAFSLVSVDDKDILLAASFKGNTLAYQH
LVVDLSAK
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgctggagctcggacagagatggacgaggctgatctgcttatcgcttctgtgtctgtgt
ctcttcctaccgagggaatcagaagccaggagagcccccaagataccccgctgtcctgcg
acctgctcctgcaccaaagacagtgccttctgtgtggataccaaggctatccccaagagc
ttcccccctggaattatatctctgacgatggtgaatgcagcctttaccacgatcccagag
ggagctttctcccaccttcacctactgcagttcctgctcttaaactccaacaccttcacc
atgattgctgatgatgcctttgctggtctgtctcacctgcaatacctgttcattgagaac
aatgacatccaggctctctcaaagtataccctcagaggactcaaatccctgactcatcta
tcgctctcaaacaacaacctgcagcagctgccaagagatctcttcaaacatctagacatc
ctcacagatttagacctgcgcgggaactccttccgctgtgactgtaaaatcaaatggctg
gtggactggatggagaagaccaacacgtctgttcctgctatctactgtgccagccccttt
gaattccaaggacgcagaatccacgatcttgcacctcgagacttcaactgcatcagcgcg
gattttgctgtttatgaaaccttcactttccactctgtgtcagtggaatcctatgagttc
aatgaggatcagtttgtggtctttgctcagcctgattcagggttctgcaccttgtatgta
tgggatcatgtggagatggtcttcaggatgtttcataacattacctcccgctctgctgtg
tactgcaaaccagtggtgataagcaacagtctttacatggttgttgctcaactttttggt
ggatctcatatctacaaatgggaagaggacccacagcgctttgtaaagatccaagacatt
gacaccactcgtgtgaggaagcccaacttcgtggacaccttccagctggatgaagagtgg
tactttgtagtagcagacagctcgaaggcaggttccaccagcatttatcgatggaacagc
aatggtttctacacccaccagtccctccatccgtggcaccgggacacacatgtggagttc
gttgatgttgggggaaagcctcacctcattctctccagcgcctctcagccacccgtggtt
taccagtggaaccgaggccagaagcagttcgcattcttctcccaaatcactgagctagca
gatgtgcagatggttaagcatttctgggtgaggaaagttctttatctttgcctcacgcgc
ttcataggggactccaagatcctccgctgggaagggcagcgtttcgtcgagatccagact
cttccgtcacggggctccatggcagtgtatcctttcacagtgggcctccgtcagtacctc
attctcggaagtgatttctccttctccagagtatacctgtgggatgacctcactcagcgc
tttcagcccttccaggagcttaacatgagagccccgcgagcgttcagcttggtatcggtt
gacgacaaggacatcttgttggccgccagcttcaaaggcaacaccctggcctaccagcac
ctggtggtggatctcagtgctaagtag
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integrated database retrieval system
