Etheostoma cragini (Arkansas darter): 117944560
Help
Entry
117944560 CDS
T07493
Symbol
si:dkey-13n15.2
Name
(RefSeq) protein transport protein Sec24C isoform X1
KO
K14007
protein transport protein SEC24
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117944560 (si:dkey-13n15.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117944560 (si:dkey-13n15.2)
Membrane trafficking [BR:
ecra04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117944560 (si:dkey-13n15.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
117944560
NCBI-ProteinID:
XP_034727342
LinkDB
All DBs
Position
5:complement(24463781..24478301)
Genome browser
AA seq
1022 aa
AA seq
DB search
MMDVPTAKQSQTPCQPWAGQNGWSPASPQGPSCNPLPSFQHLSLSSPSDQRPCYEHPCYE
HLQASNHSCQSDSTTFSYGSMLYVDNADQSEHRTSPDANVSSMVSAASQGRNIPPCSLPL
IKEGMPPCKLQQMPFYSPYSPYQGISSPFHPPRTQQGSLNGPPSPHQKYLPISPPSFGVN
QSPQCTPQPAFESPNAESSVGHTHDLASPTSPIQQQPQWTPAAHSRGTINEFVPNVAAQD
RNIPPQSPTSESRYGLDPELLPSVVKVIAEDRAEWEGKVFVSEPFSRLPPLATTSCIIED
KGNASPFAIRSASYCVPCDGQTALLSRLPLGALVTPLAKQNAGEKPLPVCKEPECLTGCG
GCGASMCHAMGWQDCGQRFYCPFCGKLCEVTWQHYQPTKGVEGVRVDKDKRPELSMGSYE
ILNSQKGEPAALLLAIDVSTSAVRGGHLAFATQEILTLLTSLKREDGDALSDIRVGLMTY
DSRIHLYDLSPALSRPHMLVITETDDLQLPVREGLLVSLKDCIDSIDSVLQLIPQFSSEC
DDSSGVPMELPVKTGLAVLQALSVPGKLLIFHTAPLIEMEHTNLSSGFFGSNKSKSIFQP
SEPAISLAKECVSQGCGVHMFVLSQQDVGGAWPGHIPYLTGGALCTYSHLQGELDRERFR
TDLKSIVDTDSGYKAELRIFVSKDMRVSGCYGLFIPGPSPSQVPMATLDWRTTLAMELAH
SRALDETRGVTIQTVLSYSTQAGDRRTRVHTLTLRCSRHLQDTFRQYQAQTLLTFYCKKI
YCAVLERPLQELREELQMEVTEALAAYRKHCCSASVSAGQLVFPQYLRALPVYINSLRKS
EVLLPGLRSSIHQRLQQRCRVLSMDACCTSTHFYPLLLPLGLSVDSSSSPNLEEALRCCA
SSLEARCLYLVNSPLTLLLWVGNQVPTCTMVELFNTSCFSSLPSGETKLPVLENPLSISV
RSLINTLNSQAPCARKLWVVKQGDTCEETLQRLLVEDKSPNGGASYADFLYHLHVNSVRL
LQ
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgtccccacagccaaacagagccagacaccctgtcagccgtgggcgggtcag
aacggctggtccccagcttcacctcaaggaccctcctgtaaccctctacccagctttcag
caccttagcctgagctcaccttctgaccagagaccttgctatgagcacccttgctatgag
cacctgcaggcatccaaccacagctgccagagcgactccaccacattttcatatggaagc
atgctttatgttgataatgctgaccagagtgagcatcgaaccagtcctgatgctaatgtt
tcatccatggtttcagctgcaagtcaaggaagaaacatacctccttgttctctccctctt
attaaggaagggatgccaccttgcaagctccaacaaatgcctttttactctccttacagc
ccttaccaaggaatatcttcccctttccatcctccacgcacacagcagggttcactgaat
ggacctccgtcaccgcatcaaaaatatcttcccattagccctccatcatttggtgtaaat
cagagtccacaatgtacacctcagcctgcatttgagagtcctaatgctgaatcctctgtt
ggacacacacacgatcttgcgtcgcccacctctcccatccaacaacagcctcaatggaca
cctgcagcacactcaagaggaacaataaacgagtttgtacctaatgtggctgcacaggac
aggaacatcccgccacagtctcctacctctgagtctcgttatggcctggaccccgagctc
ctgcccagtgttgtgaaggtgattgcagaggacagggcagagtgggagggcaaggtcttt
gtctccgagcctttttcccgtcttcctcctctggcaactacttcctgtatcatagaggac
aagggtaacgcgagtccattcgccattcgctctgcctcgtactgtgtgccctgtgacggt
cagactgccctgctcagccggctgccgctgggagctctggtcacccctctggcaaaacaa
aatgctggagagaagcccctgccagtgtgcaaagagccagagtgtcttacgggttgtggt
ggttgcggagcctccatgtgccatgcgatgggctggcaggactgtggtcagaggttttat
tgccccttctgtggtaaactctgtgaagtgacgtggcaacactaccagcccaccaaaggg
gtggagggggttcgggtggataaagacaagagaccagaactcagtatggggtcatacgag
atacttaattcacagaagggtgaacctgctgcactgcttctagccatagatgtgtccacg
tcagctgtgagaggaggacatttggcgtttgcaacacaagaaatacttactttgctcacc
tctctgaagagggaggacggggatgccttgtcagacatccgtgttggtttgatgacgtat
gacagtaggatccacctgtacgatctcagccccgccctgtcccgtccacacatgctggtc
atcactgagacagacgacctgcagctacccgtgagggaggggcttctggtgtccctgaaa
gactgtatagacagtatcgacagtgtgttacagctcattcctcagtttagttcagagtgt
gatgactcgagtggagttcccatggaactgcctgtcaaaacagggctagcagtactgcag
gccctgagtgttcccggcaagctgctgatcttccacactgcccctctgatagagatggaa
catacaaacttatcctcagggttctttggctccaacaaatcaaagtccatctttcagccg
tcagagccagccatctcattggccaaggagtgcgtcagtcagggctgcggcgttcacatg
tttgtcctctcccagcaggatgtgggcggggcttggccagggcacataccatatctgaca
ggtggagctctgtgcacctacagccacctccagggagaattggaccgagagcgttttcgc
actgatctaaagagcattgtagacacggacagcggctacaaggctgagctcaggattttt
gtcagcaaagacatgcgtgtgtctggctgttatggacttttcatccctgggccaagccct
agccaggtccccatggcgactcttgattggaggacaacgctggctatggagctcgcacac
agcagagctctggatgagaccagaggtgtaaccatacagacggtgttgtcttacagcacc
caggcaggagacaggaggaccagggttcacactctgaccctgcgatgctctcgccaccta
caggacactttccgtcagtaccaggcccaaacactgctcaccttctactgcaaaaaaatt
tactgtgccgtgttggagcgccctctacaggagctgagggaggaactgcagatggaggta
acagaagcgttggcggcctatcgcaaacactgctgctctgcttcagtgtctgctggacag
ctggtcttccctcagtacctgcgagcacttcctgtttacatcaacagtctgaggaagagc
gaggtgctgctgccgggcctgaggagctccatccaccagcggctgcagcagcgctgccgg
gtgctcagcatggacgcctgctgcacctccacacacttctaccctctgctgctgcctctg
gggctgtcagtggacagctccagctctccgaacctagaggaggcactgcgctgctgtgct
tccagcctggaggccagatgtctgtatttggttaattcgcccctcaccctgctgctctgg
gtgggcaaccaagtcccgacatgcaccatggtcgagctcttcaacaccagctgcttctcc
tccctgccctctggagagaccaagctgccagttcttgaaaaccctctgtccatcagtgtt
cgctccctcatcaacaccctcaactcccaggcaccctgtgcccgcaagctttgggtggtg
aagcagggcgacacctgcgaggagaccctgcagcgcctcctggtggaggacaagagtccc
aatggaggggcgtcctatgcagacttcctctaccatctccacgtcaactctgtccggctt
ctgcagtga
DBGET
integrated database retrieval system
