Etheostoma cragini (Arkansas darter): 117944609
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Entry
117944609 CDS
T07493
Symbol
itga2.2
Name
(RefSeq) integrin alpha-2
KO
K06481
integrin alpha 2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03271
Virion - Rotavirus
ecra04145
Phagosome
ecra04510
Focal adhesion
ecra04512
ECM-receptor interaction
ecra04810
Regulation of actin cytoskeleton
ecra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
117944609 (itga2.2)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117944609 (itga2.2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117944609 (itga2.2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
117944609 (itga2.2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117944609 (itga2.2)
04810 Regulation of actin cytoskeleton
117944609 (itga2.2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecra04147
]
117944609 (itga2.2)
04515 Cell adhesion molecules [BR:
ecra04515
]
117944609 (itga2.2)
04090 CD molecules [BR:
ecra04090
]
117944609 (itga2.2)
Exosome [BR:
ecra04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117944609 (itga2.2)
Exosomal proteins of bladder cancer cells
117944609 (itga2.2)
Cell adhesion molecules [BR:
ecra04515
]
Integrins
Integrin alpha subunits
117944609 (itga2.2)
CD molecules [BR:
ecra04090
]
Proteins
117944609 (itga2.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_3
Integrin_A_Ig_1
VWA_2
FG-GAP_3
ITGAX-like_Ig_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
117944609
NCBI-ProteinID:
XP_034727464
LinkDB
All DBs
Position
5:20949692..20969373
Genome browser
AA seq
1183 aa
AA seq
DB search
MEFFWVHFFFTIIVITDRIWISQAFNVGTAGAKIFSGPAAEEFGYTVQQATNHEGKWLLV
SAPWSGFSQNRKGDVYKCPVSGSRNNCDKLNLQDSVSIPDVKNINDNMCLGLTLTRMPAG
LMMCGPLWGQLCGDQDFYPGICAKMSPLFQPQPAFSPAVQSCGGPMDIVIVLDGSNSIYP
WEPMVTFLQKLIPALDIGPKNTQVSVIQYAVDPKFQIRLNEYKTKAELIDATSRIEQMYG
QSTNTFHAIQYASQIGFHQSNGGRAGAAKVMVVVTDGESHDEDIRDTVIADCERQGITRF
GIAVLGYYTRNNINTDNLIKEIKSIASTPTEKYFFNVSEEAALSTIAGALGSRIFNIEGT
GKGGGNFEMEMSQVGFSAHYSSKRDVMMLGAVGAYAWSGTVVHQTGSKVDILPFSVFEGT
LQDKNHSALLGYSVTTLSDRSTEYFVAGAPRSNHSGQVIVYTVDAQKQSAIIDSERGKQI
GSYFGSVLCPLDVDRDGVTDLLLVGAPMYMNDLKREEGRVYLFSVTKGILNEQGFLNGPP
PTENARFGIAISAVPDLDLDGYNDVAVGAPLEDAGKGVIYIYNGHLKALNKQFSQRIFGS
KLDPKLQYFGRSLDSYIDLNDDTIPDISIGAYGKVVQLWSRGLASVSAKASFNPDKINIF
NKPCDINGRKLSCFSTNLCFSAAFRPKNPIGPIDISYNLTLDADLQASRVTSRGLFTKNN
ERFLTEKAKISSLSVCQNYQIYVQEAPDFVNSLSMKVEIEQQNADVNPVLNVFSASAWEF
FIPFTKDCGSDDVCVSDLVLSVKTDTKAPSSVPVLVSANNRELSFEVVVKNKKENAYNTQ
VLATYSGNLYYSSIFPPTDEVKCTSTQTQAVTCQVGYPVLKQDQEVKFRINFDYNLDQLQ
NRAEVKFEAKSDGKEEIPADNKVDISIPVQYDAGIVLSRLSNIDFYVADAALPVVTTVAS
LDDIGPEFNFTVKVSTSNLPVSLVYLTIALPVTTKGGNQLLYVTSVDTQTGGAVSCDSSN
LVDPLKIGEKSHKVSFSEESLRGMEKLDCKSAKCEYIKCILKDTEVKSDYFVKVKTRIWS
GTFISATYQTIELTSTVDVETSNPNLLIISLKHLPVVVTVSKPGEKGDVPVGVVVGSVIA
GLLLLALAVGLLWKFGFFKRKYQQLQREADEDGQSHAHVNEVL
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggagttcttctgggtgcatttcttcttcactataatagtcattactgacagaatctgg
atctcgcaggccttcaacgttggcactgcaggcgccaagattttcagcggcccagctgcg
gaagagtttggctacacagtccaacaagcgacaaaccatgaaggcaaatggctcctcgtt
agtgctccatggagtggtttcagtcaaaacagaaagggggatgtttacaagtgtccagtc
tcagggtccagaaacaactgtgacaagctcaatcttcaagattctgttagtattccagat
gttaaaaacatcaatgacaacatgtgcctgggtttgactcttaccaggatgcctgcgggt
ttgatgatgtgcggtcctctttggggacagctctgtggcgatcaggacttctacccagga
atatgtgcaaaaatgagccccctctttcaacctcaacctgccttctctcctgccgtccag
tcatgtggagggcctatggacatcgtgattgttttggacggctctaacagcatatatcct
tgggagccaatggtcaccttcctccagaaattaatacctgcacttgacatcggacccaaa
aacacacaggtcagcgtcattcagtatgctgttgatcccaagtttcaaatcagactaaat
gagtataaaaccaaagctgagttgattgatgcaacgtccagaattgagcaaatgtatggt
cagtctaccaataccttccatgcaatccaatatgccagtcagataggattccatcaaagt
aatggaggtcgagcaggcgctgccaaggtgatggtggtcgtcactgatggggagtctcac
gacgaggacatccgagatacagttattgcggactgtgagagacaaggcatcacccgcttc
ggtatcgctgtcctgggttattacaccagaaacaacatcaacacagacaacctgataaaa
gaaatcaaatccattgccagtacgcccacagagaagtacttcttcaatgtgtcggaagag
gcagctctctccaccattgctggagcattggggagccgcatcttcaacatagaaggcact
ggaaaaggggggggcaatttcgagatggagatgtcccaggtcggatttagtgctcactac
tctagcaaacgggatgtgatgatgctgggagcagtgggagcctacgcttggagcgggact
gtcgtccatcaaacagggtcaaaagtagacattctccctttctcagtctttgagggaacc
cttcaagacaaaaaccacagtgcattactaggttactctgtcaccacactgagtgatagg
tcaacagaatactttgtggctggtgcacctcgctccaaccactccggacaagttattgtg
tacaccgtcgatgcccagaagcagtctgctatcatagactcagaaagaggaaaacagatt
gggtcatactttggaagtgtcctgtgccccctggacgtagacagagacggggtgacggac
ctgcttctggttggtgcgcccatgtacatgaatgatctaaagagagaagaaggcagggtc
tacctcttctctgtcaccaagggtatactaaatgagcagggatttctcaacggtccgccc
ccaactgagaatgcacgatttgggatagccatctctgccgttcctgacctggacctcgac
ggttacaatgatgttgcagtaggagccccactagaagacgcaggaaaaggtgtcatctac
atctacaacgggcatctgaaggcactgaacaaacagttctcacagagaatctttggctcc
aaactggatcctaaattgcagtattttggaaggtccctggatagctacatagatctgaat
gatgatacaatccctgatatttccattggtgcatatggcaaagtagtgcagctctggtcc
agaggtctggcttctgtctcagctaaagcttctttcaaccccgacaaaatcaacattttc
aacaaaccctgcgacattaatggacgcaagctttcatgtttcagcactaacctctgtttc
agtgctgcattcaggcccaagaatcccattggacccattgatatatcctacaatttgacc
ctggacgctgacttgcaggcttcacgagtgacatcaagaggactgttcactaaaaacaat
gaacgcttcctcacagaaaaggcaaaaatatcatctttgtccgtgtgtcagaactaccag
atttatgttcaggaggcaccagactttgtaaattccctcagtatgaaagttgaaatcgag
cagcagaatgcagatgtgaaccctgtcctcaatgtgttttctgcaagtgcctgggaattc
tttatccccttcacaaaagactgcggctctgatgatgtgtgtgtcagtgatctggtgctg
agtgtgaagacagacacaaaggcgcccagctcagttcccgttctggtcagcgcaaataac
cgagaattgtcatttgaagtcgtcgtgaagaacaaaaaggagaacgcgtacaacactcag
gtcttggccacttactccggcaacctctactactcatccatctttcctcctacggatgaa
gtcaaatgcacttcaacacaaacacaagccgtcacctgccaagtaggttacccagtatta
aaacaagaccaagaggtgaaatttcggattaattttgattataatcttgatcagttgcaa
aaccgagccgaggtgaagtttgaggccaagagcgatggtaaagaggaaatacctgcagac
aacaaagtggacatatccattcctgttcaatatgacgcagggattgttttatctaggctg
tcaaatatcgatttctatgtggcagatgctgcacttcctgtggtaacaacagtggcaagt
ctagatgacatcggccccgagtttaactttacagtgaaggtttcaacgagtaacttacct
gtcagcctcgtgtatctgaccattgctctgccagtgaccactaaaggtggaaatcagctc
ctctatgttaccagtgtggacacacaaactggaggtgctgtcagctgtgattccagcaac
ttggttgatcctctgaagattggagagaagagccacaaagtgtccttctctgaggagagt
ctcagaggcatggagaaactggactgcaagagtgcaaaatgcgagtatataaaatgcatc
ctcaaggacactgaagtcaaaagcgactactttgtgaaagttaaaacaaggatctggagt
ggcacatttatttcggccacgtatcagaccatcgagctgacctccactgttgatgtcgag
acctccaaccccaacctgctcattatcagcctcaaacacttgccagtggtggtgacagtc
agtaaacctggagagaaaggtgacgttccagtgggagtggttgttggcagcgtcattgcc
ggactgctgctgttggctctggctgttggactgctgtggaagtttgggtttttcaaaaga
aagtaccagcagcttcaaagggaggccgatgaagacgggcagagccacgcacatgttaac
gaagtgctgtga
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integrated database retrieval system
