KEGG   Etheostoma cragini (Arkansas darter): 117944730
Entry
117944730         CDS       T07493                                 
Symbol
nelfb
Name
(RefSeq) negative elongation factor B
  KO
K15180  negative elongation factor B
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117944730 (nelfb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ecra03021]
    117944730 (nelfb)
Transcription machinery [BR:ecra03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     117944730 (nelfb)
SSDB
Motif
Pfam: COBRA1
Other DBs
NCBI-GeneID: 117944730
NCBI-ProteinID: XP_034727700
LinkDB
Position
5:complement(8389034..8404629)
AA seq 583 aa
MFAGLPELGISNGEDLKETLTNCTEPLKAIDQFQMENGILLPTLQSALPFLDLHGTPRLE
FHQSVFDELRDKLMERVATIAEGKEEDRYGKLEELLEKSFPLVKMPSIQPVVMQVLKHLP
KVPEKKLKMVMADKELYKVCAVEVKRQIWQDNQALFGDEVSPLLKQYIVEKEAALFSSDL
SILHNFFSPSPKTRRQGEVVLKLTQMIGKNVKLYDMVLQFLRTLFLRTRNVHYCTLRAEL
LMSLHDLDISEICSVDPCHKFTWCLDACIREKFVDGKRARELQGFLDGVKKGQEQVLGDL
SMILCDPFACNTLVLSIMRNLQELLSQDALPRDSPDLMLLLRMLSLGQGAWDMIDSQVFK
EPRLDLEVVTRFLPAMMSVVVDDHTLNVEQKLPSEEKSSLSYPTTLPDAFNRYLQENRVA
CEMGLYYVLHIAKLRNKNTLQRLLPALVETYNDMAFGDIFLHLLTGHLTLLSDEFGSEDF
CSVVFDGFLLTSFSSKENVHRHTLRMLLHLHHKVLPSYMETLMKTLDPPKQSCEPVKELY
TQLTEKLDAQKKSPPPADETPSLDLGLHPVTVPTTASTPSTPL
NT seq 1752 nt   +upstreamnt  +downstreamnt
atgttcgcggggctgcctgagctcgggatatcaaacggcgaggatcttaaagaaacactc
accaactgtacagagcctctgaaagccattgatcagtttcagatggaaaatggcatcctg
ctgccaaccctccagtctgctcttcccttcctcgacctccatggaacgcctcggctggag
ttccaccagtctgtatttgacgagcttcgagacaagctgatggagcgagtcgccaccatt
gcagagggcaaggaggaggacagatatgggaagcttgaagagctgctggaaaagagcttt
ccccttgtcaaaatgccatcaattcagccagtggtaatgcaagtactgaagcatctaccc
aaggtgccagagaagaaactgaagatggtgatggctgacaaggagttgtacaaggtgtgt
gctgtagaggtgaaacggcagatctggcaggacaaccaggctctgtttggggatgaagtc
tcacccctcctcaagcagtacattgtggagaaggaagcagctctgtttagcagcgacctc
tccatcctgcacaatttcttcagcccttcccccaaaacacgacgccagggcgaggtggtt
ctgaagctgacacagatgattggaaagaacgtgaagctgtacgacatggttctgcagttt
ttacgaacactcttcctgcgaacgcgaaatgtccactattgcacactgagagccgagctg
ttgatgtctcttcacgacctggacatcagtgagatctgctctgtggacccttgccataag
ttcacttggtgtttggacgcttgcatccgtgagaagtttgtggacggcaagcgagccaga
gagctgcaaggtttcctagatggagtgaagaaaggacaagagcaagtcctcggggacctt
tccatgatcctatgtgacccgtttgcttgtaacaccctggtcctgagtatcatgaggaac
ctgcaagagctgctgagtcaggacgctttacccagggacagtccagacttgatgctgctg
ctgaggatgctgtcacttggtcaaggggcatgggacatgattgacagccaggtcttcaaa
gagcctcgtttggatctggaagtggtgacccgctttctgcctgccatgatgtcagtggtt
gtggatgatcacaccttaaatgtagaacagaagcttcccagtgaggagaagagttcgttg
tcataccccactaccctgccagatgccttcaacaggtatctgcaggagaacagagtggcc
tgtgaaatgggactctactacgtcctccacattgccaaactgaggaacaagaatacttta
cagaggttactacctgccctggtggagacctacaatgacatggcctttggtgacatcttc
ctgcacctgctgaccggacacctcaccctgctctctgatgagtttggatccgaagacttt
tgttcagtcgtctttgatggctttcttcttacttctttttccagtaaagagaacgtccac
agacacaccctccggatgttgctgcatctacaccacaaagtgctgccatcgtacatggaa
accttgatgaaaactcttgatcctccaaaacagagctgcgagccagtgaaggagctgtac
acccagctgacggagaagctggacgcacagaagaagagccctccgccagcagatgaaact
ccatccctggacctggggctgcacccagtgactgtcccaaccactgcctccaccccaagc
acgcctctctga

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