Etheostoma cragini (Arkansas darter): 117944823
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Entry
117944823 CDS
T07493
Symbol
slc6a4b
Name
(RefSeq) solute carrier family 6 member 4b
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117944823 (slc6a4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecra02000
]
117944823 (slc6a4b)
Transporters [BR:
ecra02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
117944823 (slc6a4b)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
117944823
NCBI-ProteinID:
XP_034727863
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Position
5:12908872..12915664
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AA seq
593 aa
AA seq
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MPRQDSAAMAGSLTHQGSPSPGYSSNNAAPVPVITQTDSRDKWSKKMDFLLSVIGFAVDL
GNVWRFPYVCYQNGGGAFLIPYILMAIFGGVPLFYMELALGQFHRTGAISIWKHICPIFK
GIGYAICIIALYVSFYYNTIIAWALFYFYSSFSTILPWTNCDNVWNTPDCTNYFGIDNVT
WTNSSKSPAEEFYTRNVLEIHKSSGLRNVGGVRWQLMLCLFLIFTIVYFSLWKGVKTSGK
VVWVTATLPYIVLFILLIRGATLPGAWRGVVFYLKPQWGKLLETSVWVDAAAQIFFSLGP
GFGVLLALSSYNPFTNNCYRDAIVTSLVNCLTSFVSGFVIFTVLGYMAEMRKVEVEDVAK
DKGPSLLFITYPEAIANMMGSTFFAIIFFVMMITLGLDSTFGGLEAIITAVLDEYPDHLA
HRRELFVLGLVVVCFLGSLSTLTNGGAYVVKLLEEFGVGCSIIAVGFLEVIAVSWFYGIK
RFSNDIESMLGKSPGLFWKVCWVAISPAFLAYIIVSSLLKAPPLTLFDYKYPDWSITVGY
MIGFSSFMWIPIYMVYKLVWTPGSLKQRLAVCLRPERTIPDIHADNLNMVIVP
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgccccgacaggactcagcagccatggccggcagtctgacccaccaaggctccccgagc
cccggctacagctccaacaacgcggccccggtgccggtcatcacacagacggactcaagg
gacaaatggagcaaaaagatggattttctcttgtctgtcattggctttgcggtggacctg
ggaaatgtttggagatttccgtacgtatgttatcaaaacggtggcggtgctttccttatt
ccctacattttgatggccatcttcggtggtgtgccactcttttacatggagctggcactt
ggacagttccacagaaccggagccatatccatatggaaacacatctgtcccattttcaaa
ggtataggatatgccatttgtatcatcgccctgtatgtgtccttctactacaataccatc
attgcctgggccctcttctacttctactcctctttctcaaccatcttgccttggacaaac
tgcgacaatgtgtggaacacccccgactgcaccaactattttggcattgacaacgtcacc
tggacgaattcctcaaagtctccggcagaggaattttacacgaggaatgtccttgagatc
cacaagtcatcagggctgagaaacgttgggggtgttcgctggcagctgatgctctgcctt
tttctcattttcaccattgtatacttcagcctctggaagggcgtgaagacttcagggaag
gttgtgtgggtgaccgccaccttgccctacatagtgcttttcatcctgctaattcgaggc
gccactctgccaggagcctggagaggtgtggtgttttacctgaaaccccagtgggggaag
ctgctggagaccagtgtttgggtggatgctgctgctcagatattcttctcattggggccc
gggtttggggttctcctggccctctccagctacaaccctttcacaaataactgctatcgt
gacgccattgtgacaagtttggtgaactgtctgaccagcttcgtgtcagggtttgtgatc
ttcacggtgctgggctacatggcagagatgaggaaggtggaggtggaggatgtagccaag
gataaagggccaagtttactcttcataacatacccagaagccattgcaaacatgatgggc
tcaaccttttttgcaatcatcttttttgtgatgatgattacgctgggactggacagcacg
tttggtgggctggaggcgatcatcactgctgtgttggacgaatacccagatcatcttgcc
cacagacgtgaactttttgttctgggcttggtagttgtctgctttttgggctctctaagc
actcttacaaatggtggtgcctatgtggtgaaactgctggaggaattcggagtaggatgc
tccattattgctgtgggtttccttgaggtcattgcggtctcctggttctacggcatcaaa
agatttagcaatgacattgagtccatgctgggcaaatctccaggattattctggaaggtg
tgctgggttgccatcagtccagcatttctagcgtatattatagtgagctccttgctgaaa
gcaccgcccctcacactgttcgactataagtaccctgactggagcatcacagtgggatac
atgattggcttctcatccttcatgtggatccccatctacatggtctacaagctggtgtgg
accccaggatctctcaaacagaggttggcggtttgtctcagaccagagaggaccatacca
gacatccacgctgacaacctcaacatggttattgtgccatag
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