Etheostoma cragini (Arkansas darter): 117944826
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Entry
117944826 CDS
T07493
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117944826 (gapvd1)
Membrane trafficking [BR:
ecra04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117944826 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
Motif
Other DBs
NCBI-GeneID:
117944826
NCBI-ProteinID:
XP_034727869
LinkDB
All DBs
Position
5:17196417..17239523
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AA seq
1491 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKQLIQRLNSDVLKTAERLYRAAWIAKQQRINLDRLIL
TSAEASPAECCQHAKMLEDTQFVDGYKTLGFQETIYGEFLARLWENPRLVASCLVAGERL
NQENTQAVTHTVFTALYGNCIMQEDESYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSI
LFKLFTEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPAKVTERLTPAQQERFGEKGSE
GYKQRVQAAVEANEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVERLEVGE
VRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMADDDADPR
RKSSLSKFDKSCVAAFLDVVLGGRAVETPPMSSMNLLEGLSRTAVYITHNQLLMLVDFVR
NVMAGDHLREEEHMALETLLANVPHSRTVKSNSLELTPSNTPQLSPATTPANKKNRLPIG
QHLAAITSWDPTTTALSAHIPLVTPFADYGFSLPAARSRSRTNIAQEGEAEASSQESLQE
LMPEEVLVISLGTGPQSVPGMMSENEVLNLQMADGAQGDGHADDTKLHGKPDKTLRFSLC
SDNLEGISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDD
KLRKFEIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAGAAAENMLGSL
LCLPGSGSVLLDPYGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGVGSTSD
DTEVREVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDGEESGH
GAHHLTSPPSQTDSLLAMFDPLSSAEGSTGTIVRPKVHYARPPHPPPDPPIPEASALGPE
TRHSLFTPHCLAQAELEHTKQRHSFPDRLVRSRSSDIVCPGRRPTSDPGLNRRVAVEERD
PAGAFTLGPSSSPSKDSLKGEVEDRKDSDDEKSDRNRPWWKKRFVSAIPKVLYWTAESDV
PAPIAAFRKRDKQEKDDIPERVPQDDPMPRQSSQAQAAEDILDKYRNIKRTSPSDGATGG
ASYDGTGDLCVEDSVHDSPREDALQNISADDLLDSASQTAQQHDCKFSFSDAKKKLRLAL
CSADSVALPIMIPATTRNGLPDHMDSEENLIVCFLKIQLAEAINLQDKNQMAQIQETTRC
VGRFDPRTCRKLLAAIAEDYRKRAPYIAYLTRCRQGLQTSQAHLERLLQRVLRDKEVANR
YFTTVCVRLLLEHMEAKMLDFIKAFQVCTASDDKTAAVEDFLRYLYGAMARDAIWQYASE
DQLQDAQMAIERSVMNRIFKLAFYPNQDGDILRDQLFHEHIQRLTKVVTANHKALQIPEV
YLKEAPWPSAQSEIRTINAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLV
FVLIRANPPCLLSTVQYINNFYASRLSGEECYWWMQFTAAVEFIKTIDDRK
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacatccacactctggcccaccacctgaagcaggagcggctgtacgtg
gcatcagagaagcagctgatccagaggctcaacagtgacgtgctgaagacagccgagagg
ctgtaccgggccgcatggatcgccaagcagcagaggatcaacctcgatcgtcttattctc
accagtgcggaggcctctccggcagaatgctgccaacatgccaaaatgctggaagacaca
cagtttgtcgatggctacaagactctgggcttccaggagacgatctacggcgagttcttg
gccaggttatgggagaaccccagactggtggcttcctgtctggtggcaggagagaggctg
aaccaggagaacacccaggcggtcacacatacagtctttaccgcactttatggcaactgt
attatgcaggaggatgaaagctaccttctacaggtgcttcgatacctggtggagtttgag
ctgaaggagagtgacaaccctcggcgcctactgcgacggggaacctgcgccttcagcatc
cttttcaagcttttcaccgagggcctgtactcggccaagctctttctcaccgccaccctc
cacgaacccattatgcagctgctggtggaagacgaagaccacctggagacggaccctgcc
aaggtgacggagcgcctcactccggcccagcaggaacgcttcggagagaagggctccgag
ggctacaagcaaagggtgcaggccgcagtggaggccaacgaagccaagctggtcgctctg
gtcaacaagtttatcggctacctgaagcagaacacctactgctttccccacagcctgcgc
tggattgtgtcgcagatgtacaagactttgtcgtgtgtggagcgtctcgaggtgggcgag
gtgcgcaccatgtgtacagacctgctgctcacctgcttcatctgcccagccatagtcaac
cccgagcagtacggtatcatttcagacgcacccatcaacgaagtagcccgcttcaatcta
atgcaggttgggcagcttttgcagcagttggccatggccgatgatgatgcagacccaagg
cggaaaagcagtttgtccaaatttgataagagttgtgtagccgcctttctggatgtggtg
cttggaggaagagcagtcgagaccccacccatgtcctcaatgaaccttctagaaggcctc
agtaggactgcggtctatattacacataatcagctactcatgctggtggattttgtgcgg
aatgtgatggcaggggaccaccttcgggaggaggagcacatggctctggagaccctgctt
gccaatgtgccccactctcgaactgtgaagagcaacagtctggagctgaccccctccaac
accccccagctctccccggctaccactcctgccaacaagaagaacagactccctatagga
caacacttagccgctataacgtcctgggaccccaccaccaccgccctgtctgctcacatt
ccattagtaaccccttttgcggattatggcttttcattaccagccgctcgaagccgcagc
cgtaccaacatcgcccaggagggggaggcagaggccagctcccaggagtccttgcaggag
ctgatgccagaagaggtgctggtgatttcactaggaactggtcctcagtctgtccctggg
atgatgtcagagaatgaggttttgaacctgcagatggctgatggggcccagggggacggc
catgctgatgatactaagctgcatggtaaaccagacaaaaccctgcgcttctccctctgc
agtgacaacttggaaggcatctcagagggtccgtccaatcgttctaactctgtgtcttct
ctggacttggagggagagtctgtctcggagctaggagccgggccgtcagggagcaacggg
gtggaggctctacagcttctggagcatgaacaggccaccactcaggacaacctggatgac
aaactgcgcaagtttgagatcagagacatgatgggtctgacagacgaccgggacatctcc
gagacggtcagcgaaacctggagcaccgatgtgctcggcagtgacttcgaccccaacatg
gatgaagatcggttgcaggaaatagcaggggccgctgcggagaacatgctcggcagcctg
ctgtgtcttcctggctcgggttcagtgctgctggacccctacggctccaccatctcggag
accacaagtgaggcgtggagcgtggaggtcctccccagtgactcagaagccccggacctg
aaacaggaggagcgcctgcaggagctggagagctgctccggggttggcagtacgtccgat
gacacagaggtgcgagaggtcagctccagacccagcacccccggcctcagtgttgtctca
ggcattagtgcaacctcagaagacatccccaacaagatcgaggacctgcggtcagagtgc
agctcagactttggagggaaggactccgtgaccagtccagatggggaggagtcaggccac
ggagcacatcatctaacatctccgccctcacagaccgattccttactggccatgtttgat
cccctctcctccgctgaaggctccactggaacaatagtaaggcccaaagtgcactacgcc
aggccccctcaccctccccccgatcctcccatccctgaagccagcgccctggggccggag
acgcggcactctctcttcacgccccactgcctggcccaggccgagctagagcacaccaag
cagcgccactccttccccgacaggctggtccggagccgcagctccgacatcgtgtgccca
ggccgccggcccactagtgaccccggcctcaaccggcgggtcgctgtggaagagcgagac
cctgccggagccttcaccttaggaccgtcctcgtcccccagcaaggactccctcaaagga
gaggttgaggacaggaaagacagcgacgacgagaagtctgatcgcaacagaccatggtgg
aagaaacgttttgtgtctgccattcccaaagtgctgtattggacggctgagagtgacgtc
ccagctcccatagctgcctttcgaaaaagggacaagcaggagaaagacgacatcccggag
cgtgtcccccaagatgacccgatgcccagacagagctcgcaagcgcaggcagctgaagac
atcctggacaagtacaggaacatcaagaggacgagcccgagtgatggagcaacaggagga
gcttcttacgatggtacaggagatctttgtgttgaggacagcgtgcacgactctcctaga
gaagatgctctgcagaacatttctgcagacgacctcctagactcagccagccagacagca
cagcagcatgactgcaagttctctttcagtgatgcaaagaagaagttgcggttggcgttg
tgttctgcagactcagtggctctgcccatcatgattcctgcaacaacacggaacgggctg
cctgaccacatggactctgaagaaaatttgatcgtctgcttcctgaagattcagctagca
gaggccatcaacctgcaggacaagaaccagatggcccagatccaggagacaactcgctgc
gtcggccgcttcgacccacgcacctgcaggaagctgctcgctgccatcgccgaggattac
agaaagcgggcaccgtacatagcttatctaacccggtgtcgccagggcctgcagacgtcc
caggcccaccttgagaggctcctccagagggtgctccgagacaaggaggtggccaaccgc
tacttcaccaccgtgtgtgtccgcctccttctggaacacatggaggccaagatgctcgac
ttcattaaagcgttccaggtgtgcacagcgtcggatgacaagactgccgccgtggaggat
tttctgcgctacttgtacggcgccatggcccgtgacgccatttggcagtacgctagcgag
gaccagctgcaggacgcccagatggccatcgagcgcagcgtcatgaaccgcatcttcaaa
ctggccttctaccccaaccaggatggagatattctccgagaccagcttttccatgaacat
atccagcggctcacaaaagtagtgacggccaatcataaagctcttcaaatcccagaggtt
tacctgaaggaggctccctggccctctgcacagtccgagatcaggaccatcaatgcgtac
aagacaccacgagacaaagtccagtgtatactgcgcatgtgttccaccatcatgaacctc
cttagtctggccaatgaggactccgtccctggagcggatgactttgtccctgtactggtc
tttgtcctcataagggcaaacccgccctgcctgctgtccaccgttcagtacatcaataat
ttctacgccagccggctgagtggggaggagtgctattggtggatgcagttcaccgcggcg
gtggaattcattaagaccatcgacgatcgcaagtga
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