Etheostoma cragini (Arkansas darter): 117944935
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Entry
117944935 CDS
T07493
Symbol
hip1rb
Name
(RefSeq) huntingtin interacting protein 1 related b isoform X1
KO
K20040
huntingtin-interacting protein 1-related protein
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117944935 (hip1rb)
Membrane trafficking [BR:
ecra04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
117944935 (hip1rb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANTH
I_LWEQ
HIP1_clath_bdg
Motif
Other DBs
NCBI-GeneID:
117944935
NCBI-ProteinID:
XP_034728041
LinkDB
All DBs
Position
5:11920798..11942373
Genome browser
AA seq
1059 aa
AA seq
DB search
MNRTMKPRRTDLGAARENFDKRQLNSISKAITSAETPVKEKHARRIILGTHTEKGAFTFW
SYALGFPLASSSILSWKFCHVLHKILRDGHRNVLQDCMRHHSSLVEIGKMWSNLHDKYGQ
LVALYTKLLCTKMEFHIKHSEILPNLEATDEVLERTAGTDINNVFQLTVEVFDYLDTELR
LAETVIRQLNTSIAISTLTSGQCRLAPLIQVIQDCSHLYHFTVKLLFKLHACLPADTLQG
HRDRFHDQFHSLKTFFNKARDMLYFKRLIQIPKLPDSPPNFLHAASLAKHVKPVVVIPDE
YESETQEDDDDDPPLIDISEGNSLQAQPPQLDIFDQTFGPPNGGLDDRDLQIEKLQRDLE
MLRAELERVKEEAQRYITQLKSQINSLEAELEEQRAQKQHALVENEQLRMELEATRRRNA
EHESSQAFFIEAEKRAQATEQRYNKMKEKHTELVASHAELLRKSADTVKMLSATQQTQEE
VERTKQQLSFEVDRIRQEADMKLEEQKFEMEKLKRQLEEKMAEMMRIKGTLQSSEKTTEQ
MNSSVTALHAEKERLMRSVSEKEAELSSLRQAAQVQQSSLQQERERNSRELGELQGKLQE
KSSQEEQLKQKLLEEQFALLQGTVTEAENIIQDAVAKLDDPLHIRCTSSPDYLISRAEAT
LGSVDKVKKGHADYLNNMRDAGGLLRALTQFSHLAADTIINGSATAHMAPTDQADRLTEN
CRGCATQSLQFFKDLKSKTSLQRADPASIRLIVQKILHLGEELRPKGMDIRQDELGDLVE
KEMAATSAAIEEAVRRIDEMMNQARKDTSGIKLEVNERILNSCTDLMKAIRMLIIASTDL
QKEIVESGKGAATIKEFYVRNSRWTEGLISAAKAVGWGATEMVESADKVVLHTGKYEELI
VCSHEIAASTAQLVAASKVKADRNSKKLSVLQQASRHVNEMAANVVGSTRTGQEHLEEKE
TMDFSGMSLIKLRKEEMESQVKLLELESQLENERLRLGELRKKHYDLAGVPLEQVSEGNG
ETSSLANPVAMLPKPSKPALLKKPALAQKPNVYSKTTFK
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaactatgaaacccaggcggaccgacctaggagcggcgagggagaattttgac
aagcggcagctgaacagcatcagcaaggccatcacctctgctgagacgcctgtgaaggag
aaacatgcacgacgaatcatcctggggactcacaccgaaaagggagccttcacattttgg
tcctatgctctgggcttccctctggccagcagctccatcctcagctggaagttctgccat
gtactgcacaaaatcctgcgggacggacaccgcaatgttctacaagactgcatgaggcat
cacagttctctagttgaaattgggaaaatgtggagcaacctccatgacaaatacggacag
ctggtggctctgtataccaagctgctctgcacaaaaatggagtttcatataaagcattca
gaaatcctaccgaacttggaggccacagatgaagttttggagcgcactgcaggaacggac
attaataatgtgttccagctcacagttgaggtgtttgattacttggacacagagctgagg
ctggctgagacagtgatccgacagctcaacacatccatcgccatttccactctcacatca
ggccagtgtaggctggccccactcatccaagtcatccaggactgtagtcacctctaccac
ttcaccgtcaagctgctgttcaagctgcatgcctgtctccccgctgatactttacaaggt
caccgtgatcgttttcatgaccagttccacagtcttaagaccttctttaataaagccaga
gacatgctgtacttcaagagactgatccagattcccaagctgcctgattccccacccaac
ttcctgcatgcagcctcactggccaagcacgtgaagccggtggtggtcatccctgatgag
tatgagtcggagacacaggaagacgatgatgacgatccgccgctcatcgatatcagcgaa
ggcaacagcttacaggcgcagccaccgcaactggacatatttgatcagacgtttggacct
ccaaatggaggccttgatgacagagatctccagattgagaaacttcagcgggacctggag
atgttgagagcagaactggaaagagtcaaagaggaggctcagcgttacatcacacagctg
aagtcccaaatcaatagtttagaggcagaactagaagaacagcgtgcacagaaacaacat
gcccttgtggaaaatgaacaactgcgcatggagctggaagctacgcgtcgtcgaaacgca
gaacatgagagctcacaggccttcttcattgaagcagaaaaaagagcgcaggccactgag
cagcggtacaataagatgaaggagaagcacacagagctggtggccagccatgctgaacta
cttcggaagagtgcagacactgtgaagatgctatcagcaacccagcagacacaggaagaa
gtggagaggaccaaacagcaactgtcgtttgaggttgatcgaataagacaggaagccgac
atgaagttggaagagcagaagtttgaaatggagaagctgaagaggcagctggaggagaag
atggcagaaatgatgcgtatcaaggggactctgcaaagcagcgagaagacgacggagcaa
atgaacagctcagtgactgctctgcatgccgagaaggagcgtctgatgcgatctgtaagt
gagaaggaggcggagctgtcgtctctgcggcaggctgcgcaggtgcagcagtcgtcactt
cagcaggagcgagagaggaatagcagggagctgggagagctgcagggaaaactgcaggag
aagtcaagtcaggaggagcagctgaagcagaagcttctggaggagcagtttgcgctgctg
cagggcaccgtcacagaggcggagaacatcatccaagatgctgttgctaagctggatgat
ccccttcatatacgctgcaccagctctccagattacctcataagtcgggcggaggccaca
ttgggctccgtagacaaagtgaaaaagggccatgcagattatctgaataatatgagggat
gctggagggctgctgagggctctgacccagttctcccacttggctgcggatacaatcatc
aacggcagcgccactgcacacatggcacctactgaccaagcagaccgactgacagagaac
tgcagaggctgtgccactcagagtctgcagttcttcaaggacctgaagtccaagacctcc
ctccagagggcggacccggcctccattcgcttaattgttcaaaagatcctgcacttaggc
gaggagctgcggccaaaaggcatggacattcgtcaggatgagctaggagatctggtcgaa
aaggaaatggctgcaacatcagcagctattgaggaggcagtccgcaggattgatgaaatg
atgaatcaggcacgaaaggacacatcaggaattaaactggaggtcaatgaaagaatcctc
aacagctgcacagacctgatgaaggccatccgcatgctcatcatagcatctacagacttg
cagaaggagattgtcgagagtgggaagggcgccgccaccattaaggagttctatgtcaga
aactctcgctggactgagggactcatctctgctgccaaggctgttggatggggagccacc
gagatggtggagtctgctgataaggtggtactgcacacaggcaagtatgaagagttgatt
gtctgctcccacgagattgctgctagcacagcacagctggtggctgcctcgaaggtgaag
gcagaccgcaacagtaagaagctgtcagttctccagcaggcttctcgccatgtgaatgaa
atggcagctaatgtggttggctcaacaaggacaggccaggagcacctggaggaaaaagaa
accatggacttctctgggatgtccctcatcaagttgagaaaagaagaaatggagtcccag
gtgaagctgctggaattagaaagtcagttggagaacgagcgtctgcgtttgggcgagctg
aggaagaagcactacgatttggcgggagttcctttagagcaggtttctgaggggaacggt
gaaacctcctcgctggccaatcctgttgccatgttaccaaaacccagcaagccggctctt
ttgaagaaacctgcgttggcccagaaacccaacgtatactcaaaaaccacgtttaagtaa
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