Etheostoma cragini (Arkansas darter): 117944945
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Entry
117944945 CDS
T07493
Symbol
smyd1b
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1b isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra00310
Lysine degradation
ecra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117944945 (smyd1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecra03036
]
117944945 (smyd1b)
Enzymes [BR:
ecra01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
117944945 (smyd1b)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
117944945 (smyd1b)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
117944945 (smyd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
PhoU_div
DUF5696
Motif
Other DBs
NCBI-GeneID:
117944945
NCBI-ProteinID:
XP_034728060
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Position
5:complement(3319024..3325405)
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AA seq
489 aa
AA seq
DB search
MDNVAIFDSPGKGRGLKATKEFWAGDVIFSEPSIAAVVFDSLSERICHSCFRRQDKLQRC
GQCKFSHYCDRTCQRAGWAEHKQECGAIKAYGKVPNENIRLAARIIWRLDKEGSVMSDMQ
LTTLEELEDHIDDMQEDELKELKVDIHNFLDFWPRSSKQHTIDTISHIFGVINCNGFTVS
DQRGLQAVGVGLFANLCLVNHDCWPNCTVILNHGNQSAVNTVFHSQRRIELRSLGKIEEG
EELTVSYVDFLNLSEERRRLLKTQYFFDCTCEHCKDHIKDDLKLGGLEVDGVKPTEEQVK
EATDYCFQMLEKMDDARLKGNYHEVVKICKDCIEKTEPVLADTHIYQLRMWSTLSEVQAY
LQFFSEAAEYARKMVQGYMKLYHPNNAALGMAAMRAGVTHWQAGEIEIGHGMICKAYAIL
MVTHGPTHPITKDLEAMRMQTEMELRMFKQNEYVYHSMREAALKNKPMAMMHEPSSMEEG
VKNLFRRRK
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggataacgtggcaatatttgactcacctggaaaggggagaggtctgaaggctaccaag
gagttttgggctggagacgttattttttctgagccgagtattgcagctgttgtgtttgac
agcctatcagagcgtatttgccacagctgtttccgcagacaagacaagctacagaggtgt
ggacaatgcaaatttagtcattactgtgaccgaacttgccagcgtgccggctgggcggaa
cacaagcaagagtgtggggccatcaaagcttacggcaaagtaccgaacgagaacatccgc
ttggcggcccgcatcatatggcgccttgacaaagaggggagcgtgatgtctgacatgcag
ctgaccaccctggaggagctggaagaccacattgatgacatgcaagaggacgagttaaag
gaattaaaagtggacatccacaacttcctggacttctggccccgtagcagcaagcaacac
acgattgataccatctcacatatttttggcgtgattaactgcaacggcttcactgtgagt
gaccagaggggccttcaggcagtgggagttggtctttttgctaatttgtgtctcgtgaat
cacgactgctggccaaactgcaccgtgatcctaaaccacggcaatcaatcggctgtgaat
actgtgtttcattctcaacggaggattgagctgcgttctttaggtaagatcgaagaggga
gaggagctgacggtctcatacgtggacttcctgaatttgtccgaggagagacgaaggctc
ctgaaaacacaatacttctttgactgcacatgtgagcactgcaaggaccacatcaaagat
gacttgaagttggggggattggaagtggacggtgtcaagcctacagaggaacaagtgaaa
gaggcaacagattactgctttcaaatgctggagaagatggacgatgctcggctaaagggc
aactaccatgaggtggtgaaaatctgcaaagattgcatagagaagacagagccggttttg
gctgacactcacatctaccagctgaggatgtggagcacattaagtgaggtgcaagcttac
ctgcagttcttcagtgaggctgcagaatacgcccgcaaaatggtgcagggatacatgaaa
ctgtaccacccgaacaatgctgctctaggcatggctgccatgcgagcaggggtgactcac
tggcaagctggggagatcgagattggccacgggatgatctgcaaggcttacgccattctc
atggtcacccacggcccgacacatcccatcaccaaggacctggaggcgatgcgtatgcag
acagagatggagctgaggatgttcaagcaaaacgagtatgtttaccacagcatgagagag
gcagctctgaagaacaaaccgatggccatgatgcatgaacccagttccatggaggaggga
gtcaagaatctcttccgccggaggaagtaa
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