Etheostoma cragini (Arkansas darter): 117944967
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Entry
117944967 CDS
T07493
Symbol
si:ch211-225b11.1
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1 isoform X1
KO
K05039
solute carrier family 6 (neurotransmitter transporter, taurine) member 6
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecra02000
]
117944967 (si:ch211-225b11.1)
Transporters [BR:
ecra02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
117944967 (si:ch211-225b11.1)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
117944967
NCBI-ProteinID:
XP_034728086
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Position
5:12659002..12688177
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AA seq
625 aa
AA seq
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MLVYSAVYTVNCDNKKTLLNYRQATMEVSAENVKITPEEKDYALRPLDINAISEKKTLGA
ETQRPTWSGRLEFILASVGYAVGLGNIWRFPYLCYSSGGGAFMIPYLTMVLLCGMPLVFM
EFSIGQYTRLGPVHALAKICPLLKGVGLATVVISFVFSTYYNVLITWSLFYFFNSFGATL
PWNSCNNTWNAVGNCSSGFPGNTTHLQSPSQQFFDHRLLQKTSGIEDVGGVRWELFGYLI
LAWVIVYLCIFKGVKSTGKVVYFTAVFPYFILIALLINNVQLPGAKNGILYFVTPVWGKL
FKVKVWVNAAAQVFNSLGIAFGSMISMASYNKFNNNILRDALIVSFTNSFTSILAGFVIF
SAIGYMAHIHNLPVDNIATDGPGLVFVVYPEVLSTMPVFQLWAPLFFFMLLCLGLDSQFA
TVEVAITFIKDEFGPQVLRFLKREELLTLAVCIIGFVLGIPHVTKGGIYVFQLMDQHTAV
VSLVFLAFFEIVAVCWIFGVPRICLMVKKMQGKTPNIYFRLCWLLLCPLLVLCILISSIV
QYTPAHYEKYTYPRWAEVVGWGVSLVSIVWIPLGAIQEIYSHKGSLLQRLETAMMPTIDL
DAENPQPEKENPDNQASETLLTSVA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgttagtctacagtgcagtgtacactgtcaactgtgataacaaaaaaacgttgcttaat
tatcgccaagccacaatggaggtcagtgccgaaaatgtcaagataacccctgaagagaag
gattatgctttgagacccttagacattaacgcgatatccgagaagaagaccttgggtgca
gagactcagagacccacatggagtgggcggctggagttcatcttggcatcggtggggtac
gcggtgggactgggcaacatctggaggttcccctacctgtgctacagcagcggtggaggt
gccttcatgatcccttatctcaccatggtgctcctgtgtggcatgcctctggtcttcatg
gagttttctattgggcagtacactcgtctagggccagtgcatgctctcgctaaaatctgt
cccttgttgaaaggtgttggtctggccacagtggttatttcttttgtgttctccacgtac
tacaatgtgctcatcacctggtcacttttctatttcttcaactcattcggagcgaccctc
ccctggaattcttgtaacaacacctggaatgctgttggaaactgttccagtggtttccct
ggcaacactacccacctgcagtctcccagccaacagttctttgatcacagacttctgcag
aaaaccagtggtattgaagatgttggtggtgttcgctgggaactttttggctatctcatt
ttagcctgggtcattgtgtatttatgcatatttaaaggagtcaaatccactggaaaggtt
gtgtacttcaccgcagtatttccgtacttcattctgattgccctgctcattaataatgtg
cagcttcctggcgccaagaatggtatcctctactttgtaacaccagtctggggcaaactg
tttaaagtaaaggtttgggttaatgcagctgcccaggtgtttaactcccttggaatagca
tttggctccatgatttcgatggctagttacaacaagttcaacaacaacattcttagggat
gctttaattgtatcatttaccaactcattcactagtatcctggctggctttgtgatcttc
tcagctattggctacatggctcatattcataacctcccagtggacaacatagctacagat
ggtcctggtttagtgtttgttgtgtatcctgaagtcctctccaccatgcctgtctttcag
ctgtgggctcctctgttcttctttatgctgctgtgtctgggcctggacagccagtttgcc
acagttgaggtggcaataacattcataaaagatgagtttggcccccaagttctacgtttt
ctaaagagagaagagctgctgaccctggctgtgtgtatcattggctttgttctgggaatt
ccccatgtaaccaagggaggaatctatgtgtttcagctgatggaccaacacactgctgtg
gtctcccttgtgttcctggctttctttgaaattgtcgctgtctgctggatttttggtgtc
ccacgtatctgcttaatggtcaagaagatgcaaggaaaaactccaaacatctactttcgt
ctctgttggctactgctctgtcccctcttggtgctgtgtatactgatctccagcattgtc
cagtacactcctgctcactatgaaaagtacacatacccaaggtgggctgaagtagtgggc
tggggtgtctcactggtctccatagtgtggatcccactgggagccattcaagagatctat
agccacaaaggctcacttcttcagagacttgaaacagctatgatgcccacaatagaccta
gatgctgagaatccccagccagaaaaagaaaacccagacaaccaggcatctgaaaccttg
cttacttcagtggcatga
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