Etheostoma cragini (Arkansas darter): 117945050
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Entry
117945050 CDS
T07493
Symbol
ddx21
Name
(RefSeq) nucleolar RNA helicase 2 isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecra03009
]
117945050 (ddx21)
03036 Chromosome and associated proteins [BR:
ecra03036
]
117945050 (ddx21)
Enzymes [BR:
ecra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117945050 (ddx21)
Ribosome biogenesis [BR:
ecra03009
]
Eukaryotic type
Pre-60S particles
Helicases
117945050 (ddx21)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
117945050 (ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
117945050
NCBI-ProteinID:
XP_034728190
LinkDB
All DBs
Position
1:complement(22886623..22897369)
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AA seq
751 aa
AA seq
DB search
MPSKIIFDTEDQAMEDDVDTVAEAKPLKNKTKEGKKLKKKQLQDQEAQEDPDCEPPAPKK
KKKKDKLAVDHMNGHIDETTDMNGNSNGVETPKKIKKKAEGDTEKKKKKQKKDIEEAETS
GHSTPNTPVQTPIQTPAQSSEDSASDSEKEPEETPEQKEGAFSNFRISPFTIDKLKARGV
SYLFDIQVKTFNSVYDGEDVIAQARTGTGKTFSFAIPLVEKLQRETVQFARGRPPKILVL
TPTRELAIQVAKDFKDITKKLSLTCFYGGSSYNPQLEAIRNGIDILIGTPGRIKDHLQNN
KLDLSKLKHVVLDEVDQMLDMGFAEQVEEILSSSYQKVSDSNPQTLLFSATCPPWVYEVA
KKYMRPECKHVDLIGKKTQKAATTVEHLAIACHWSQRAAVIGDVIQVYSGSHGRTIVFCE
TKKEANELSLNASIKQSTQTLHGDIPQKQREITLKGFRNGGFEVLVATNVAARGLDIPEV
DLVVQCSPPKDVESYIHRSGRTGRAGRTGVCICFYQRKEEDQLRYVENKAGITFRRVGVP
TANDIIKSSSKDAVRFLDSVPAAAIGYFRASAEKLIEERGAVDALAAALAHISGATSLEQ
RSLLNSDIGYTTVQMVCSQEMHNLGYAWKSIKEQLGDEFENHVQRMTFLKGKTGVCFDVP
ADKVKEIQDSWKDSRRWQLTVATELPELEEKQFNNRGDRGFGGGGRSDRGGGFRGGRGRS
YGGNGFRNGGGGGYSNNRGGHKRNFSQAFDY
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcaaaaatcatctttgatacagaagatcaagccatggaggacgacgtggacact
gtcgcggaggctaaacccctaaagaacaagaccaaggagggcaagaaactgaagaagaag
cagttgcaggaccaggaagcgcaagaggacccggactgtgaacctccagcaccgaagaag
aaaaagaaaaaagacaagctggcagtggaccatatgaacggccacatagatgagaccaca
gacatgaacggcaacagtaatggcgtcgaaacaccaaagaagataaagaagaaagccgaa
ggagacacagagaaaaagaaaaagaagcaaaagaaagacattgaagaggcggaaaccagc
ggacattccaccccaaacacccctgtccagacgcccatccagacaccggcccagtccagt
gaagactctgctagtgacagcgaaaaagaaccggaggagacaccagagcaaaaggaaggg
gccttttccaacttcaggatctccccattcaccattgataaattaaaagctcggggagtc
tcttacctgtttgacattcaggtgaagacatttaattctgtatacgacggagaggacgta
attgcccaagcccgaacaggaacgggaaagactttttcatttgccatccctttggtggaa
aagctccagagggagacagtgcagtttgccaggggccgcccccccaagatactggtgtta
acgccaaccagagagttagctatccaggttgctaaggacttcaaagacatcaccaagaaa
ctgtctctcacctgtttctatggaggcagctcatacaatccacagctcgaagctatccgt
aatggtatcgatattttgatcggcacccctggtcgcatcaaagaccacctccagaacaac
aaactggacctctctaaactgaaacacgttgttctggatgaagtagaccaaatgttggac
atgggatttgcagaacaggttgaagagattttgtcttcatcatatcagaaagtctctgac
tccaacccacagactcttctgttttcggccacctgccccccctgggtctacgaggttgcc
aagaaatacatgagaccagagtgcaaacatgttgatctgattggcaagaaaacacagaaa
gctgcaacaactgtagaacatctggccatagcttgccactggtcacagcgtgcagccgtg
atcggagatgtgatccaggtttacagcggcagccatggcagaaccatcgtgttctgcgag
acgaagaaagaggccaatgaactttcccttaatgcatccatcaaacagagcacccagacc
ctccatggggatattcctcagaaacagagagagattacgctgaagggcttcaggaatggg
gggtttgaggttctggttgccaccaatgttgcagcccgtggattagacatccctgaagtg
gacttggttgtccagtgttctccacccaaggatgtggagtcatacatccatcgttcagga
cgtacgggcagggcaggcaggactggagtctgcatctgtttctaccagaggaaagaggag
gaccagctgcgctacgtggaaaacaaagcaggtatcacattcagacgagttggcgtcccc
accgcaaacgatatcatcaagtcatcaagcaaggatgctgtcaggtttctggattctgtt
ccagctgcagccatcgggtacttcagagcatcagctgagaagctgattgaggagagagga
gcagtcgatgcactagctgctgccctagcacatatttctggagccacaagtctagagcag
aggtcactgctcaactctgatattggttacaccactgtgcagatggtgtgttctcaggag
atgcataatctgggttatgcctggaaatcaatcaaagaacaacttggagacgagtttgaa
aaccatgttcagagaatgacctttctcaaaggcaaaacgggagtttgttttgatgtccca
gctgacaaagtcaaggagattcaggacagctggaaggacagtcgccgttggcaactgact
gtagccaccgagctcccagagctggaggagaagcagttcaataaccgtggcgacagaggc
tttggcggcggtggccgcagcgatagaggaggggggttcagaggtggaagggggcggagc
tatgggggaaatgggttccggaatggtggcggcggtggctatagcaacaacagaggagga
cacaaacgcaacttcagtcaagcttttgattattga
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