Etheostoma cragini (Arkansas darter): 117945069
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Entry
117945069 CDS
T07493
Name
(RefSeq) tetratricopeptide repeat protein 28-like
KO
K24936
tetratricopeptide repeat protein 28
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ecra03037
]
117945069
Cilium and associated proteins [BR:
ecra03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
117945069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHAT
TPR_7
TPR_12
TPR_1
TPR_2
TPR_8
TPR_11
TPR_10
TPR_MalT
TPR_16
TPR_17
TPR_19
TPR_14
BTAD
PcrB
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
117945069
NCBI-ProteinID:
XP_034728213
LinkDB
All DBs
Position
5:complement(30444094..30654808)
Genome browser
AA seq
2516 aa
AA seq
DB search
MHVPRAEIQRLAPKFSIFSSGTSGRPLRCVPGDERGGFGLSKAQFMEKVQQSNEACRRGD
FQSAVSLYTDALHADPQNCILYSNRSAALLKLGQHRAALDDAGKACQLNPKWPKAYFRQG
VALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRESLEPTYQQLQKMKLDK
SPFVVVSVIGQELLTASHHTASVVVLEAALKIGTCSLKLRGSVFSALSSAHWSLGNAEKS
TGYMQQDLEVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRNQLVLAMKLKDREAA
SMALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELGNMGAVYIAMGDFDNA
VQCHEQHLGIAKALENKREEARAYSNLGSAYHYHRNFDKAMSYHTHVLELAQELEERSIE
MRAYAGLGHAARCMQDLERAKQYHEQQLSIAEGLKDRAAEGRASSNLGMCAKYSDLWSIR
SLIHEEVLGGVGDFQFNNILRRVMEVMEEVMEVMEVVEVMEMVEVVEMVEVMEVMEVMEV
MEPDWTTTKHHLGVFPKSERMLRFPAAGSDSSRHKVTREVTLSPTEADLTEDAMPSDLAV
QRRICSGDDFEGWCLVRSKSLCHSSSELWRSRAPPPLPLLLTPLPVHDSLRVVLQCVVCP
PQTAVGQRLGSQVVSLSRHAQVLFLEHDRPLVVTEGLVGEAQVPVGAGLARGAARLLGDL
QVTLVAAQRRLVLSHRLVHGAQTAAGVPLQQSVPGVTGDGQLALQTRDGLLVVSQLAVQG
AQFTVGLRLASELAQLVGHDEPLLKAHQRLLEVSHGPAGVVSQDAIGLFEAGGDVEGRRD
AGSAVGLLLVLHAVEALGHRQILVIVLDGFLKVSQSLLLLQVANGFLHHAYIHFGDAHIA
VHLSLHDRVLQPPTQLQLLLVALEGHGVLPQGHVDGCQVTVGFALPRHVAQLLVHLQLLG
VVAQSFVVLLHKSVGGPEGGVGAGLHPALLNLKQDEDVSEVPQSSEASLCVVERLGQGQQ
VFLTLLGLGEVPEGFERQAEVTVRLGLTQFVVQVLGQGQVLLVVFHRVLVVPQTVVGVTQ
IVTNLPFALHVLEVRGQAEVLLVVGHGLRELSARAVEVAEVAESARLALDVPELPGDVEV
VLVVLQSAVVGAQRLVSHRQVAVGGGLRGPVVDLHGDLQLLPVVADRLVEGAQGVVGVAH
VAVGILKFHEVYLGEGVSDGGSDFQEGGGGGGGVVSGSSLEQHIASAREALGVESYYSSP
QGEPVEGKDAVVKRQMVIHGLLQMTLADKDPLEGLVAGGLQVEQGELVIRAVLGFVADGL
KQSRGPASSGQTSDRQENIKLGEYNLGVPEAKGHHDEALAVAERGRTRAFADLLVERQTG
LQDSDPYTPVTVEHILDTVNSQRALVLYFSMAAGYLYSWLLAPGADVKTDEGRPYWFSIG
ICFNLSGNTYPPRKWVWGLMHSSGPVGRHRQLVMVLEGELYLIPFALLKGSSSNEYLYER
FSLIAVPSIHGLGTSAKAHSRRPGPAPCGGVSMAAVVGNPRLPSPVMDRWLWGPMPSAEE
EALMVAELLGCQPLAGPAATKERVMSALTQAECAHFATHISWKLAALVLTPNPESVAGGA
GASVGGGTMGRGAGGRRGSSGRGRKGSIGSGYTVPESLHMQDDGSDVESICDSPPLQEFL
LTAADILDLRLPIKLVVLGSYQESSSKVTADGVVGLTRAFLAAGAQCALVSLWPVPVAAS
KVFVHAFYTALLNGTKASAALADAMKTVQSSKQYSHPSNWAGYMLIGNDVKLNSPSSLIG
QALAEILQHPDRARDALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVGGVPGWQALL
TAVGFRLDSVGSGMPAAVFFPTADPGDRLQQCSTTLQSLLVGEKVEIGGEEQRGMECREE
KLSYNCCAFVCVCAGFDLCEVGQEEVVLKTGKLANRRTLHFALQSLLALFDSTELPKRLS
LDSSSSLESLASAQSVSNPLPLGYSSLPFSPPCLDNQASDAISVYSLSSVASSMSCVSKS
DCDFLGHRQRGGATAHYPVHKYPHVPRSRSSPHGAAAAAVAAGAAGAAGARGEDEEYEGF
SIISSEPLGSHCDSLPLPPGHSQRHHRGGRGVVAGSGAGAGRGYTVSSRGSVSTPTSPVK
TCLAPSPNSPFQKVKGKVSSSDTGESDQSSTETDSTVKSQEEKTVHLDPQELAQKILEET
QSHLRAVGSLQRTGPEGAGGTSVRSSAFRSSETSAFSRPNSSASGRAQSSPRPRPPSRSS
SLQKISSGYNSPAISESSQKEGSHPSPTLDSHAQFRLKYPSSPYSGHISRSPSNVSPSSG
HQSPAGSAPSPALSYSSTGSGCSTSADVPDLDRLRRGVIDEKVQAIHNLKTFWANAAAAQ
QHQHHHLGPVRAVHGAPGSLASASRDVLSLLNLSPRRCSPNETQDGLELRELGLQSLDRG
SKNSSNGHHCSNPRKVAGPSPTISTSSSPGARSIRLPAGNGYKFLSPGRFFPSSKC
NT seq
7551 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtcccacgtgcagagatccagaggctagctcccaaattttccatcttcagttct
gggacatcgggcagacccctccgctgcgtccccggagacgaaagaggcgggttcggtctc
agcaaagcccagttcatggagaaggtgcagcagagcaacgaggcgtgtcggcggggggac
ttccagtccgccgtgagtctgtacaccgacgccttgcacgccgacccccagaactgcatc
ctgtacagcaaccggtcggcagcgcttctcaaactgggtcaacaccgggcggcgctggac
gacgctgggaaggcctgccagctcaatcccaagtggcccaaggcatacttccgacagggt
gttgcccttcagtaccttggccgccatgccgacgcgctggccgccttcgcctccgggctg
gcccaagaccccaagagcctgcagctgctggtgggcatggtagaagccgccatgaagtcg
ccgttacgagagtctctggagcccacctatcagcagctgcaaaagatgaagctggacaag
agtccctttgtggtggtctctgtgattggccaggagctgctgacggcgagccaccacacc
gcctccgtcgtggtgctggaggccgctctgaagatcggcacatgcagcctcaagctccgc
ggctcggtgttctcggccctcagcagcgcccactggtccctgggcaacgccgagaagagc
accggctacatgcagcaggacctggaggtcgccaagaccttaggtgaccaaacaggggaa
tgccgtgctcacgggaatctgggctcggcattcttctccaagggaaactaccgcgaagcg
ctgaccaaccaccgcaaccagctggttctggccatgaagctgaaggacagagaggctgct
tccatggcgctgagcagcctgggccatgtctacaccgccatcggggactaccccaacgcc
ctggccagccacaagcagtgtgtcctgctggccaagcagtccaaggaccagctgtccgag
gcccgcgagctgggaaacatgggcgccgtctacatcgccatgggggacttcgacaacgcc
gtgcagtgccacgagcagcacctgggcattgccaaggccctggagaacaaacgcgaggag
gcccgggcttacagtaacctgggcagcgcctaccactaccaccgcaactttgacaaggcc
atgtcctaccacacgcacgttctggagctggcccaggagctggaggagaggtccatcgag
atgagggcctacgcgggactgggacacgcggctcgctgcatgcaggacctggagagggcc
aagcagtaccacgaacagcagttgtccatagcggagggactgaaggacagggctgcagag
ggaagggcctcctccaatctgggtatgtgtgcaaaatactcagacttatggagcataagg
tcactcatccatgaggaggtgctaggtggtgtgggggatttccagttcaacaatatcctt
cggcgggtgatggaggtgatggaggaggtgatggaggtgatggaggtggtggaggtgatg
gagatggtggaggtggtagagatggtggaggtgatggaggtgatggaggtgatggaggtg
atggagccagactggaccaccaccaagcaccatctgggagtctttcctaagagtgaaagg
atgttaagattcccagcagcaggatctgacagctctcgccacaaagtcacccgcgaggtc
acgctctccccaacggaggctgatctgactgaggatgcaatgccgtctgatctggctgta
cagcgacgtatctgcagcggtgatgactttgagggatggtgtcttgttcggagtaaatca
ctgtgtcattcctccagcgagctgtggaggtccagggcgccgccgcctctgccgctgctg
ctgacgccgctgccggtacatgacagcctgcgagtagttctgcaatgcgtggtgtgtcct
ccccagactgccgtaggccagcgtcttggcagccaggtcgttagtctgagccgccacgct
caggtgctgttcctggaacacgaccgcccgctcgtagttaccgagggactcgtaggtgag
gcccaagttcccgtaggcgcgggcctggcgcgcggggctgcccgcctcctcggcgatctc
caggtcactctggtggcagcgcagcgccgtctcgtactctcccatagactggtacacggc
gcccagaccgcagctggcgtccccctccagcagtctgtcccgggtgtcacgggcgatggc
cagctggcgctccagacacgagatggcctgctcgtagtttcccaactggctgtgcagggc
gcccagttcaccgtaggcctgcgccttgcctccgaactcgcccagctcgtgggccacgac
gagccgcttctcaaagcacaccagcgactgctggaggtttcccatggccctgcaggtgtg
gtctcgcaggatgctatcggcctctttgaagcaggaggagacgtagaagggagaagagac
gcgggatccgctgtaggccttctcctggtcctgcatgcggttgaggctctgggccaccga
cagatactggtcatagtacttgatggcttcctcaaagtctcccagagcctcctgctgctc
caagtagccaatggcttcctccatcacgcctacattcattttggtgatgcccatattgcc
gtacacctgagcctccacgacagggtccttcagcctccgacccaactccagctgctcctc
gtagctcttgaaggccatggcgtacttccccagggccatgtagacggctgccaggtgacc
gtgggctttgcactcccccgacacgtcgcccagctcctggtacacctccagctcctgggt
gtggtagcccagagctttgtcgtacttctgcacaagtctgtaggtggccccgagggcggc
gtaggcgcaggcctccatcctgcgctccttaacctgaaacaagacgaagatgtctccgag
gttccccagagctcggaagcgagcctgtgcgttgttgagcgactgggccagggacagcag
gtatttctgacactcctcggccttggcgaagtccccgagggctttgaacgccaagccgag
gttacagtacgccttggcctgactcagtttgtcgtgcaggtccttggccagggccaagtc
ctgctcgtagtatttcaccgcgtcctggtagttccccagacagtagtgggcgtaacccag
attgtgacaaaccttcccttcgctctccatgtcctggaggtccggggacaggcggaggta
ctgctcgtagtagggcacggcctgagggaactctccgcgagagcagtggaagttgccgag
gttgccgagagcgcgcgcctcgctctggacgtcccggagctcccgggcgatgttgaggtg
gttctggtagtgctgcagagcgcggtcgtgggcgcccagcgcctggtaagccaccgccag
gttgccgtgggtggaggcctgcgaggcccggtcgttgacctccatggagatctgcagctc
ctgccggtggtagcggaccgcctggtcgaaggcgcccagggcgttgtaggcgttgcccat
gttgccgtaggcatcctgaagttccacgaggtgtacctgggcgagggcgtgtcggacgga
ggctcagacttccaggaggggggcggcggcggcgggggggtggtcagcggctcctcgttg
gagcagcacatcgccagcgcccgcgaggctctgggggtggagtcttattacagcagccct
cagggtgaaccggtggagggaaaggacgctgttgtaaaacgtcagatggttattcatgga
ctgctccagatgaccttggctgacaaggacccgctggagggcctggtagcaggaggtctg
caggtcgaacagggagagcttgtaatccgtgctgtgctgggcttcgtggcggatggtctc
aaacagagccgaggcccggccagcagtgggcagacgtcggacagacaggagaacattaag
ctgggtgaatataacctgggtgttcctgaagctaaaggccaccacgacgaggcgctggcg
gtggcggagcgcgggcgcacgcgagccttcgcggacctcctggtggagagacagacgggg
ctgcaggactcggacccctacaccccggtgacggtggagcacatcctggacacggtcaac
agccagagggccctggtgctgtatttctccatggctgccgggtacctgtacagctggctg
ctggctccgggagcagatgtgaagacagatgaaggccggccgtactggttctccatcggg
atttgctttaatctctctgggaacacatatccacctagaaagtgggtgtggggcttgatg
cactccagcgggcccgtgggccggcaccgtcagctggtgatggtgctggagggggagctc
tacctcatccccttcgctctgctcaaaggaagctcgtccaacgagtacctgtacgagcgc
ttcagcctcatcgccgtgccctccatccacggcctgggaaccagcgccaaggctcactcc
cggcgccctggaccggctccctgtggcggtgtctccatggcagcggtggtgggaaacccc
cggctgccgtcccccgtgatggaccgctggctgtgggggcccatgccctctgcagaggag
gaggccctgatggtggccgagctgctgggctgccagccgctggccggccccgctgccacc
aaggagcgtgtgatgagcgccctcacgcaggccgagtgcgcccactttgccacccacatc
tcctggaaactagcggctctggtgctcaccccgaaccctgagagcgtcgccgggggagca
ggtgcaagcgtgggaggtggaaccatggggagaggcgccgggggtagaaggggcagcagt
ggccggggcaggaagggctccatcgggagcggctacaccgtccccgagtctctgcacatg
caggacgacggcagcgacgtggagagcatttgtgacagtccgcccctgcaggagttcctg
ctcacggctgcggacatactggacctgaggttgcccatcaagctggtggtgctggggtcg
taccaggagtccagcagcaaagtgacagcagacggtgtggtgggtctgacccgggccttc
ctggctgccggggcccagtgtgccctcgtgtccctgtggcctgtccccgtcgcggcgtcc
aaggtgtttgtccacgccttctacaccgcgctgctcaacggcaccaaggccagcgcggcg
ctggcagacgccatgaagaccgtccagagcagcaagcagtactcgcacccctccaactgg
gcagggtacatgctgattggtaacgatgtgaagctcaacagcccctcgtccctgattggc
caggcgctggcggagatcctgcagcatccagacagagcccgggacgctctgagggtttta
ctccatctggtggagaagtctctgcagaggatccagaacggccagcgtaactccatgtac
acgtcccagcagagcgtggagaacaaggtggggggggtccccggctggcaggcgctgctg
accgccgtgggcttccgtctggactcggtgggcagcgggatgcccgccgcggtcttcttc
cccaccgcggaccccggggaccggctgcagcagtgcagcaccaccttacagtcactgctg
gtgggagagaaagtggagatcggaggagaagagcagagagggatggagtgcagggaggag
aagttgagttacaactgttgtgcttttgtgtgtgtgtgtgcaggatttgacttatgcgag
gtgggccaggaagaagtggtgctgaagaccggcaagctagccaaccgccgcaccctgcac
tttgcgctccagtctctgctggcgctattcgactcgacggagcttcccaagcgtctgagc
ctggacagctcgtcttccctcgagtctctagcttcagcccagtccgtgtccaaccccctg
cccctggggtactcaagcctccccttctcccccccgtgcctggacaaccaggcctcggac
gccatctccgtctacagcctcagctccgtggcctcctccatgagctgcgtttccaagtcc
gactgcgatttcctcggccatcggcaacgcggcggggccacggcgcactaccccgtccac
aaatacccccacgttccgcggagtcgctcctcgcctcacggggcggcggctgctgccgtt
gcggcgggggcagcaggggcagcaggggcccgcggggaggacgaggaatacgaggggttt
tccatcatcagcagcgaaccgctgggaagccactgcgactctttgccgctgccgccgggt
cacagccagcggcaccaccggggaggcaggggggtcgtcgcggggtccggggcaggagca
gggaggggctacaccgtgtcgtccaggggcagcgtcagcacccccacgtcccctgtcaaa
acatgcctggcgcccagtccgaactccccattccagaaggtaaagggtaaggtgagcagc
tcagatacaggcgaatcggaccagtccagtaccgagacggacagcactgtcaagtctcag
gaagaaaaaactgtccatctggatcctcaggagcttgcccagaagatcctggaggagacc
caaagccatctacgggccgtggggagtcttcagcgaactgggcccgagggtgctggagga
acctcggtgcggagcagcgctttccgctcctcagaaaccagcgcgtttagccgccctaac
agcagtgctagcggccgagctcagtcgtccccgaggcctagaccgccctcccggtcctcg
tccctgcagaagataagctccggctacaacagtcctgcgatctcagagtcttcccagaag
gagggcagccatccttcgcccactctggacagccacgcacagttccggttaaagtacccg
agctccccgtacagcggccacatctcccgttcccctagcaacgtgtctccaagttctggt
caccagtccccggccggcagcgctccgtccccggcgctgtcgtactcctccacgggctcc
ggctgctccacatcggccgacgtccccgacctggaccggctgagacgaggcgtcatcgat
gagaaggtccaagcgatccacaatctgaagaccttctgggccaacgctgcagcagcccag
caacaccaacaccaccacctgggtcccgtcagagccgtccacggcgccccggggtccctc
gcttccgccagcagggacgtactgagccttctgaacctctcgccgcgccgctgctccccc
aacgagacccaagacggcctggagctgcgggagctggggctgcaatcgctagacaggggc
agcaagaactcctccaacggacaccactgctccaacccccgaaaagttgccggcccgtcg
ccgaccatctccacgagcagcagccccggcgctcgttccatccgactacccgccggcaac
gggtacaagttcctgtcgcccggaaggtttttcccttcgtcgaaatgctga
DBGET
integrated database retrieval system
