Etheostoma cragini (Arkansas darter): 117945100
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Entry
117945100 CDS
T07493
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117945100 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecra01002
]
117945100 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117945100 (usp30)
04121 Ubiquitin system [BR:
ecra04121
]
117945100 (usp30)
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117945100 (usp30)
Peptidases and inhibitors [BR:
ecra01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117945100 (usp30)
Membrane trafficking [BR:
ecra04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
117945100 (usp30)
Ubiquitin system [BR:
ecra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117945100 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
117945100
NCBI-ProteinID:
XP_034728255
LinkDB
All DBs
Position
5:12850795..12859969
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AA seq
517 aa
AA seq
DB search
MLWCRPESSDKLVGEFLGTGHIVRHDATPDQAKPLSTFKNKMIKNWGVIGGIAAAIAAGV
YVLWGPITERKKRKRGMVPGLLNLGNTCFLNSLLQGLAACPSFIRWLETFSGLPTIQSCN
DKHLSTTLLQLLKALSSTEPGEEDVLDAGCLLDVLRLYRWHISSFEEQDAHELFHVLTSS
LEEERDRQPKVAPLFDMHSLESLPDQDEKTMTCRSRAPLHPIPSPWKSQHPFHGRLTSNM
SCKRCEQQSPVRYDSFESLSLSIPLPQWGRPISLDQCLQHFISSETIKEVECENCTKLQG
TTVNGQVLESQRTTFVKQLKLGKLPQCLCIHLQRLTWSSEGTSIKRQEHVQFTEYLSMDR
YKHYASTHRSPRIKCAPNPLKAEHLDDSTQKPSANGTAEHRNNNNKPFSNGTCSSVFLQS
PGANPQLGLTYGYSPAEYLFQLTAVLVHHGDMHSGHFVTYRRSPSPPRTSSPFSSQWLWV
SDDSVRKASQHEVLSSNAYMLFYERVRGLNLALCSEE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggtgcagaccagaaagctctgataagctcgttggggagttccttggcactgga
cacatagtcagacatgacgcgactccagatcaagcaaagcctctttcaacttttaaaaac
aagatgataaaaaactggggagtcattggtgggatagctgctgcgattgcagctggagta
tacgttttgtggggcccaattacagagagaaagaagagaaagagaggtatggttcctggt
ctgttgaacttaggcaacacctgcttcctgaactctttgcttcagggtttggcagcatgt
ccgtccttcatcaggtggctggagacgttttcaggtttgcctacgatccagtcttgcaat
gacaaacacctgtctacaacactgcttcagcttctcaaagctctgtccagtactgagcct
ggggaggaagatgtacttgatgccgggtgcctcctggatgttctcagactgtaccggtgg
cacatcagttcatttgaagagcaggatgcacatgaactttttcatgtccttacatcttct
ctggaggaggagcgagataggcaacccaaagttgctcccctgtttgacatgcattctctt
gagagcctccctgatcaagatgagaaaactatgacctgcagaagtcgagctccacttcat
ccaataccaagtccttggaagtctcagcatccctttcatggtcgcttaacaagcaatatg
tcatgcaagcgctgtgaacaacaaagcccagtgcgttatgactcatttgaaagcctctcc
ctgtccatcccgttacctcagtggggtcgacctatttctctagatcagtgtcttcagcat
ttcatctcctcagaaaccatcaaagaagtggagtgtgaaaactgcaccaagcttcaaggg
accacagtaaatggacaagtcctggaaagccaaaggacgacatttgttaaacagctaaaa
ctgggaaagctcccccagtgcctctgcatccatttacaaagactgacgtggtccagtgaa
ggaacctcaatcaaaagacaggagcatgtgcagttcacggagtatttatcgatggaccgc
tacaaacactatgcttccacacacagaagtccacggattaaatgtgctccgaacccctta
aaggcagaacatttggatgattccacgcaaaagccctctgctaatggcactgcagagcat
cgtaacaacaacaacaaacctttctccaacggaacatgttcgtctgtatttctccagtct
cctggtgcgaacccacagctgggcctcacatatggatacagtcctgcggagtaccttttc
cagctcacggccgtgctggttcaccacggtgacatgcactcaggacattttgtcacgtac
cgacggagcccttccccaccacgcacctcttcgcccttcagctcccagtggctttgggtg
tcggacgactctgtacgaaaagccagccagcacgaggtgctgtcttccaacgcctacatg
ctcttctacgagagagtccgaggattgaacctcgctctctgctcagaagagtaa
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integrated database retrieval system
