Etheostoma cragini (Arkansas darter): 117945166
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Entry
117945166 CDS
T07493
Symbol
pcna
Name
(RefSeq) proliferating cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03030
DNA replication
ecra03410
Base excision repair
ecra03420
Nucleotide excision repair
ecra03430
Mismatch repair
ecra04110
Cell cycle
ecra04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117945166 (pcna)
03410 Base excision repair
117945166 (pcna)
03420 Nucleotide excision repair
117945166 (pcna)
03430 Mismatch repair
117945166 (pcna)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117945166 (pcna)
09144 Cellular community - eukaryotes
04530 Tight junction
117945166 (pcna)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecra03032
]
117945166 (pcna)
03400 DNA repair and recombination proteins [BR:
ecra03400
]
117945166 (pcna)
DNA replication proteins [BR:
ecra03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
117945166 (pcna)
DNA repair and recombination proteins [BR:
ecra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
117945166 (pcna)
MMR (mismatch excision repair)
Other MMR factors
117945166 (pcna)
TLS (translesion DNA synthesis) factors
Other TLS factors
117945166 (pcna)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad1
Rad9
Hus1
Herpes_UL42
Motif
Other DBs
NCBI-GeneID:
117945166
NCBI-ProteinID:
XP_034728356
LinkDB
All DBs
Position
5:20270824..20274114
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AA seq
260 aa
AA seq
DB search
MFEARLVQGSILKKVLEALKDLITEACWDVSSSGISLQSMDSSHVSLVQLTLRHDGFDSY
RCDRNLAMGVNLSSMSKILKCAGNEDIITLRAEDNADTLALVFETLNQEKVSDYEMKLMD
LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSQIGDAVMISCAKDGVKFSASGELGTGNV
KLSQTSNVDKEDEAVTIEMNEPVQLIFALNYLNFFTKATPLSKTVTLSMSADIPLVVEYK
IADMGHVKYYLAPKIDEEAS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaggctcgcctggtccagggatccatcctgaagaaggtgctggaggctctgaag
gatctgatcacagaagcctgctgggacgtcagctcgtctggcatctccctgcagagcatg
gactcttcacatgtctccctggtccagctcaccctgcggcatgacggcttcgactcgtac
cgctgcgacagaaacctcgccatgggagttaacctcagcagtatgtcaaagatcctgaag
tgtgcaggaaacgaagacatcatcaccctcagagcagaagacaatgcagacacactcgca
cttgtgtttgagactcttaaccaggagaaagtttcagattatgagatgaagttgatggac
cttgatgtggagcagcttggtattccagagcaggagtacagctgtgtggtgaagatgccc
tctggggagtttgctcgtatctgccgggacctgtcccagatcggtgatgccgtcatgatc
tcttgtgccaaggacggagtcaagttttctgcctcaggagaactgggcacaggaaatgtc
aagctgtcccagaccagcaacgtagacaaagaggacgaggcagtcactattgagatgaat
gaacccgtccagctgatctttgctctcaattacctgaacttcttcaccaaggcaacgccg
ctgtccaagaccgtcacccttagcatgtccgcagatatccctctcgtggtggagtacaag
attgccgacatgggacacgtcaaatactacctggcacccaagattgacgaagaagcttcc
taa
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