Etheostoma cragini (Arkansas darter): 117945255
Help
Entry
117945255 CDS
T07493
Symbol
malt1
Name
(RefSeq) mucosa-associated lymphoid tissue lymphoma translocation protein 1 isoform X1
KO
K07369
mucosa-associated lymphoid tissue lymphoma translocation protein 1 [EC:3.4.22.-]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
117945255 (malt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecra01002
]
117945255 (malt1)
Peptidases and inhibitors [BR:
ecra01002
]
Cysteine peptidases
Family C14: caspase family
117945255 (malt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MALT1_Ig
Peptidase_C14
Ig_3
Ig_2
I-set
ig
V-set
Ig_4
C2-set_2
Motif
Other DBs
NCBI-GeneID:
117945255
NCBI-ProteinID:
XP_034728536
LinkDB
All DBs
Position
5:22504851..22517371
Genome browser
AA seq
827 aa
AA seq
DB search
MSDSLDRSTKIHLLKEPVVKKLCEVLEKSSNRGWRKLGEIVGNDRRIKVSSNDMEMCSLK
VLELEGSPSRMLLRLMGERGCTTGHLVEYLQILGNSEALQCLKPSALQILIQPQSVALIS
GHNLRLSCHAVGKSPVQYQWFKTKEEVPNSFSPDLVISPVHLKDAGFYICRVNCGDTFEF
SQWAQVDVLNVTMSCGQSYHSLEGRLKLVIQPQPQRLNVGETLQLECGAVGRPIPRYQWH
RNGVPVPNATKRKLMIPHSMQDQHGRYRCEISSSTERMWTNEVDVVIAPTIAVQISEATE
CSEDDVYGIGEGSSELFLNSIPEQLYATDKVALLIGNLSYQNHPQLKAPMVDVYDLTNLL
RQLNFQVVSLLDLTESEMRNAVDEFLLLLHKGVYGLLYYAGHGYENYGNSFMVPVDAPNP
YRSANCLCVQSILKLMQEKETGLNVFLLDMCRKRNIHDDSAPNIVLRVTANIVFGYATCQ
DAEAFELSSSGFTNGVFVKFLKKRLLDDEKITVVLDRVAEDMGQFDATKGKQALEIRSSL
SERRALTDPIQPGDSADLAHYRSLQWAKTHELPESMCLNFDCGAQIKLGFAAEFSNVLVI
YTHIIKKPEDMSLCQAHVTDFSQDLDVDPKEMNRETPEETGIYLLSSNLPQHCLYTRVSS
LQKLREELVFTVCLQGTFTAMDDESVHWTKSINIGKPLIARLDLNRAMRRNSCMQTCGMP
HSPSHSPCHSPGPEHHLHLHYGSNQAQDYSRLSPQHHYLDVYERVQGAMGGCGDSFYDIS
KSCYEPVYDSAAGLSSSPGRLSIPIETTDDINELQTVFINSLQLQQP
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattctttggacaggtccaccaagatccacttgttgaaagagcctgttgtgaag
aagctctgtgaggtgttggaaaaatccagcaatagaggatggcgaaaacttggagagata
gtcggcaatgacaggcgtattaaagtcagctcaaacgacatggagatgtgctctctgaag
gtgttggagctagagggaagcccgagtcgcatgttgctgaggctgatgggagaacgaggc
tgcaccacaggtcacctggttgaatacctccaaattctcggcaactcagaagccctgcaa
tgcctaaaaccatcagctcttcagatcctcattcagccccagtcagtggctctcatatct
ggccacaatcttcgcctgagctgccacgctgtgggaaaatctccagtacagtaccagtgg
ttcaagaccaaggaagaggtgccgaacagcttctctccagacctggtgataagtccagtc
catctgaaggatgctggattttacatctgcagggtgaactgtggagatacttttgaattc
agccagtgggctcaggtggacgtcctgaatgtcaccatgtcttgcgggcagagttatcat
tccttagagggtcggttgaagttggtgatccaaccccagccccaacggctaaatgttgga
gaaaccctgcagctggagtgtggagctgttggacggccgatccctcgataccagtggcac
agaaatggagttccggtccccaacgccacaaaaaggaaactcatgattcctcactcgatg
caggatcagcacggcaggtatcgttgtgagatcagcagcagcacagagagaatgtggacc
aatgaagtggacgttgttatcgcaccgacgatagctgtccagatttcagaggcaacggag
tgctctgaagatgatgtttacggcattggagaaggttccagtgaattgttcctaaatagt
attccagaacaactttatgcgactgacaaagtggccctgctgattggcaatctgtcttac
cagaaccacccgcagctcaaagctcccatggtcgacgtgtatgacctcaccaacctcctg
cgacagctaaacttccaggtggtttcactgctggacctcacagagtcagagatgagaaac
gctgttgacgagtttctgttgctgctccacaaaggagtctatggtctgctgtactatgct
ggtcacggatatgagaactacggaaacagtttcatggtgccggtagacgcaccaaacccg
taccggtcagccaactgtttatgtgtgcagagcatcctaaaactgatgcaggagaaggag
acaggcctcaatgtttttctgctggacatgtgcaggaagaggaatattcatgatgacagc
gctccaaacattgtcctaagggttaccgccaacattgtctttggatacgctacgtgccag
gatgccgaggcttttgagctgagttccagcggcttcaccaacggggtgtttgtcaagttt
ttaaagaagcggctgctagacgatgagaagatcaccgtggtgctggacagagtcgctgag
gacatgggtcagtttgacgctacaaaagggaagcaggctttggagatccgcagtagtctg
tcggagaggagagcgctgaccgatcctatccagcccggcgacagcgctgatcttgctcac
tatcgcagcctccagtgggcaaagactcacgagcttcctgagagtatgtgtctcaacttt
gactgcggggctcagatcaagttgggcttcgctgcagagttctccaacgtgctcgtcatt
tacactcacatcattaagaagcccgaggacatgtccctctgccaggctcacgtcaccgac
ttctcacaggaccttgatgtggatcctaaagagatgaacagagagactccagaggagaca
ggcatctaccttctgtccagcaacctgccgcagcactgtctttacaccagagtcagctca
ctgcagaaactcagggaggagctggtcttcactgtgtgccttcagggcactttcaccgcc
atggatgacgaatctgtccactggaccaaaagcatcaacattggcaagccactgatcgca
cgactggacctgaaccgggccatgcggcgaaatagctgcatgcagacatgcgggatgcct
cacagcccgtcccacagtccctgtcacagccccggacccgaacaccacctccaccttcat
tacgggtcaaaccaggcccaggactacagccgcctatcaccacagcaccactacctggac
gtctacgagcgtgttcagggtgcaatgggaggctgtggggattccttctatgacatcagc
aagtcttgctatgaacctgtgtatgactcagctgctgggctttcaagttcaccaggccgg
cttagcatccctatagagaccactgacgacatcaacgagctgcagacggtgttcatcaac
agtctgcagcttcagcagccgtga
DBGET
integrated database retrieval system
