Etheostoma cragini (Arkansas darter): 117945278
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Entry
117945278 CDS
T07493
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03015
mRNA surveillance pathway
ecra04261
Adrenergic signaling in cardiomyocytes
ecra04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117945278
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117945278
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
117945278
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecra01009
]
117945278
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117945278
03036 Chromosome and associated proteins [BR:
ecra03036
]
117945278
Protein phosphatases and associated proteins [BR:
ecra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
117945278
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
117945278
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
117945278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
DUF6816
TYW3
Motif
Other DBs
NCBI-GeneID:
117945278
NCBI-ProteinID:
XP_034728573
LinkDB
All DBs
Position
5:30789195..30799139
Genome browser
AA seq
448 aa
AA seq
DB search
MAGAGGGASDVQWCFSQVKGAIDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEP
ESKNQPQSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTI
KLWKISERDKRPEGYNLKEEDGRYRDLNTVTTLRVPVFRPMDLMVEASPRRVFANAHTYH
VNSISVNSDCETYLSADDLRINLWNLEITDRSFNIVDIKPANMEELTEVITAVEFHPNQC
NTFVYSSSKGTIRLCDMRASALCDKHAKQFEEPEDPNNRSFFSEIISSISDVKFSHSGRY
MMTRDYLSVKIWDLNMESRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGNDSVVMT
GSYNNFFRMFDRGYRQDVTLEASRENSKPRSVMKPRKVSTGGKRKKDEISVDSLDFNKKI
LHTAWHPQDNIIAVATTNNLYIFQEKLN
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagccggtggtggggccagtgatgtgcagtggtgcttttcccaagtcaaagga
gccatagacgacgacgtcgctgaagctgacatcatttctacggttgaattcaaccactct
ggggagctgctggccacgggggacaaggggggtcgagttgtcatctttcagcaggagcca
gagagtaagaatcagccgcagtccagaggagagtacaatgtttacagcaccttccagagc
cacgagcccgagtttgactacctgaaaagcctcgagatcgaggagaagatcaacaagatc
cgatggctgccccagaaaaacgctgcccagttcctcctgtccacaaacgataaaaccata
aaactgtggaaaatcagtgagcgggacaagagaccagaaggctacaatctgaaggaggaa
gacggccgatacagagatctcaacacggtcacaacactacgggtaccagtattcaggccc
atggacctgatggtggaagcgagccctagacgggtgtttgcgaacgctcacacctaccac
gtcaactccatctccgtcaacagcgactgtgagacgtacctgtcggcagacgacctgcgc
atcaacctgtggaacctggagatcaccgaccgcagcttcaatatcgttgacatcaagcca
gccaacatggaggagctgacggaggtgatcacagcggtggagttccaccccaaccagtgc
aacaccttcgtctacagcagcagcaagggcaccatccgcctgtgtgacatgagggcgtcg
gcgctgtgcgacaagcatgccaaacagtttgaagagccagaggatccaaacaaccgttca
ttcttctctgaaatcatttcctccatctctgatgtgaagttcagccacagcggacgctac
atgatgacccgcgactacctgtccgtcaagatctgggatctcaacatggagtcccggcca
gtggagacgtatcaggtgcatgaatatctcaggagtaaattgtgttccctctacgagaac
gactgcatcttcgacaagtttgagtgctgttggaacggcaacgacagcgtggtgatgacc
ggctcctacaacaacttcttcaggatgttcgaccgcggctaccggcaggacgtcaccctg
gaggcgtcgcgggagaacagcaagccccggtcggtcatgaaacctcgcaaagtaagcacg
ggtgggaagcgcaaaaaggacgagatcagtgtagacagtctggactttaacaagaagatc
ctccacactgcctggcatcctcaggacaacatcatcgccgtggcaaccaccaacaatctg
tacatattccaggaaaaactgaactag
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