Etheostoma cragini (Arkansas darter): 117945279
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Entry
117945279 CDS
T07493
Symbol
ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecra03021
]
117945279 (ctr9)
Transcription machinery [BR:
ecra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
117945279 (ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
ARM_TT21_5th
TPR_Slam
ARM_TT21_4th
TPR_EMC2
ANAPC3
Motif
Other DBs
NCBI-GeneID:
117945279
NCBI-ProteinID:
XP_034728614
LinkDB
All DBs
Position
1:18684845..18694253
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AA seq
1165 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLSKLEKARLAFGRALELNSKCVGALVGLAV
LELNSKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLER
AKAEGEHDEHYYNAISVTTSYNLARLYEALCEFHEADKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GFFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKYQNTEVL
LYLARALFKCGKLHECKQMLLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLSKSGDKMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEEKE
LRAKQEQERDLLRQQMMKDKEDKRNKEVEEQKKLLEQRALYVEKTKNLLTFAEGSKEMAK
EKKKGGGRRKKGDIDEFVNDDSDEDLPMRKKKKRRGGSGSEQEEGEDGEKKSRKKRRKPA
RGGDDSNDEEGGSRPKKQRKPKERKKFEKAQPERLPPSLKGKIKSKAIISSSESSSDEDG
LKIAEDRQQRDSGSGSDGEDGPRKRIASDSESDGGRNQSGSEGGRNHSGSEVGSPRHSAG
SEDDSGSDRPVKKRRVQLQSDSEQSDAESKRSRSGSDDESRPGSPVAASDRGSDRGSEAG
SDNEGSPRRSDNGSEHEASNNDDSD
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggctctatcgagatccctttacgggacacagatgaggttatcgagcttgac
tttgaccagctgccagaaggagacgaggtcatcagcatcctgaagcaggagcatacacag
ctgcacatatggattgctttggctttggagtactacaagcagggcaaaacggaggacttt
gtcaagcttttagaggcagctcgtatcgatggaaacctcgactacagagaccacgagaag
gatcagatgacctgtctggacacattggcggcctactatgtccagcaagcacgtaaagag
aaaaacaaagatgccaagaaagaactcatcacgcaggccacgctgctctacacgatggca
gacaagatcatcatgtatgatcagaaccatttgttgggacgagcctgtttctgcctgctg
gaaggagacaagatggaccaggctgacgctcagttccactttgtcctcaatcagtccacc
aacaacatcccggctttgctcggtaaggcctgcatctcctttaataaaaaggattacaga
ggagcactggcatactacaaaaaggctctgcgtacaaaccctggctgcccagctgaggta
aggctggggatgggccattgttttgtgaagctcagcaaactggagaaggctcgtttggcg
tttggtcgagccctggagcttaattcaaaatgtgtgggcgctcttgttggtttggcggtg
ttagagctcaacagcaaggaggcggattccatcaagaacggagtgcagctcctgtcacgg
gcctacaccatcgaccccagcaaccccatggtgctcaaccacctcgccaaccacttcttc
tttaaaaaggattacagtaaagtgcaacatctggccctccacgctttccataacacagag
gtcgaggccatgcaggctgagagctgctaccagttagctcgctcgtttcacgtgcaggag
gactatgaccaagcatttcagtattactaccaggccactcagttcgcctcgtccaccttt
gtgttgcccttcttcggcctggggcagatgtatgtgtatcgaagagacaaggagaatgcg
gcacagtgcttcgaaaaggttttgaaggcctaccccaacaactacgaaacaatgaaaatt
ctgggatctctctacgcaacatctgacgatcaggaaaagagagacatcgccaaaggtcat
ttgaagaaggtaacggagcagtacccagatgatgtggaggcgtggatcgagctggctcag
atcctggagcagacggacattcagggagcattgtctgcgtacggcacagccacacgcatc
ctgcaggagaaggtgcaggccgacgttccccctgagatcctcaacaacctgggggctctt
cacttcagactgggcaaccttggagaggccaagaaatactttcttgcctctctcgagcgg
gccaaagctgaaggcgagcatgacgagcattactacaacgccatttctgtcaccacctcc
tacaatctggcccgcctgtacgaggcattgtgcgaattccacgaagctgacaaactctac
aaaaacatcctgagagaacatcctaactacgtggactgttatttgcgtcttggagcaatg
gctcgcgacaaggggaatttctacgaagcatctgattggttcaaagaggccctgcagatt
aatcaggatcacccggatgcatggtcgctgatagggaaccttcacttggccaaacaggaa
tggggaccgggtcaaaagaagtttgagcgcattctgaagcagccatccacacagaacgac
acctactccatgctggctctgggtaacgtgtggctgcagactctgcaccagcccaccaga
gaccgggagaaggaaaagagacaccaggaccgagccctggccatatacaaacaagtcctg
cgaaatgacgccaagaacctttatgctgccaatggcatcggtgccgtcctggcccataag
ggctttttcagagaggcccgcgacgtgtttgcgcaggtgagggaagccacagcagacatc
agcgacgtctggctaaatctggctcacatctacgtggaacagaagcagtacatcagcgcc
gtgcagatgtatgagaactgcctgaagaaattttacaaataccagaacacggaggtgctg
ctgtatcttgcgagggcgctcttcaaatgcggtaaactccatgagtgcaagcagatgctg
ctgaaggcccgtcacgtggcgcccagcgacacggtgttgatgtttaacgtggccctggtg
cttcagagactggccactcttgtgctgaaagatgagaagagcaacctgaaggccgtgctt
agcgctgtcaaagagcttgaactggctcacaggtacttcagctacctcagcaagtccgga
gacaagatgaggtttgacctcgctctcgccgcttctgaggccaggcagtgctctgacctg
ctgagtcaggctcagtaccatgtggcgagagccagaaagcaggatgaggaggagaaggag
cttcgtgccaaacaagaacaggagagggacctgctgcgtcagcagatgatgaaagacaag
gaagataagcggaacaaagaggtggaggaacagaagaagctcctggagcagagagcgttg
tacgtggagaagaccaagaacctactcaccttcgcagagggctcaaaggaaatggccaaa
gaaaagaagaagggcggtgggcgtcgcaagaaaggcgacattgacgagtttgtcaacgac
gactctgacgaggacctgccaatgaggaagaagaagaagaggaggggcggcagcggcagc
gagcaagaggagggcgaggacggagagaagaagtcacgcaagaagaggaggaagcccgct
agaggaggagatgacagcaatgacgaggaaggagggtcacggcccaagaagcagcgtaaa
cccaaagaacgcaagaagtttgaaaaggcccagcctgagcgtttgccaccgtctctcaaa
ggaaagatcaagtccaaggctatcatctcctcttcggagtcgtcttcagacgaggatggc
ctgaaaatagccgaagacagacaacaaagagacagtggttcaggatctgatggcgaggac
ggccccaggaagcgtattgcatctgacagcgagtcagatggaggcaggaaccagtctggc
agcgagggaggtaggaaccactctggcagcgaggtgggcagccctcggcattctgccggc
tccgaggatgactctggcagcgaccgtccagtgaagaagaggagggtgcagctgcagtcc
gattcagagcagtctgacgccgagagcaagaggagtcgttcagggtccgacgacgagtcc
cggcccggttcgccagttgctgcgtccgaccgaggatcagacaggggatctgaagcggga
tcagacaacgagggctccccgcgccgctccgacaacggctcggaacatgaagcctccaac
aatgatgacagcgattaa
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