Etheostoma cragini (Arkansas darter): 117945314
Help
Entry
117945314 CDS
T07493
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1-like
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ecra01100
Metabolic pathways
Module
ecra_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
117945314
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ecra01003
]
117945314
Enzymes [BR:
ecra01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
117945314
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
117945314
Glycosyltransferases [BR:
ecra01003
]
Glycan extension
O-Glycan
117945314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
FlxA
ATP-synt_D
Motif
Other DBs
NCBI-GeneID:
117945314
NCBI-ProteinID:
XP_034728634
LinkDB
All DBs
Position
5:complement(19322114..19330607)
Genome browser
AA seq
534 aa
AA seq
DB search
MFKRWLLALSARVGLTVLGLCCCLSLFYLLACKPTSHSSQQSLLWSSGATSKEGYMALLQ
EREDSHRHYINSLTKQIAQLKEALQERTQQLQESLEKAKTRGIFPQGLESLHRIPTQTDL
KDFLRSQLNQAEVNSGAKLSSEYAVIPFDTFTLRRVYQLETGLTRHPEERPVRRDRRDEL
ISTVETALHVLNGPQQHTDNTRQKRTYSPSDFIEGLTRTERDRGTVYELMFKGAGPQDFT
QLVLFRPFGPVMKVKSESVDTRSMLINIIVPLSKRPDAFRQFIKNFREVCIRLDGRVHLT
VVYFGRDQIDQVKAMLDQTTRETRFRSFTLIQLNEEFSRGRGLEVGSRAWRRSQNVLLFF
CDVDIHFTADFLTSCRLNAEPGKKVYYPVLFSQYNPSIIYSNETLLPSIQQQLVIKKGTG
FWRDFGFGMTCQYRSDFLNIGGFDRNIKGWGLEDVHLYRKYLHSKLMVIRSPSRGLFHLW
HEKNCGDELPPDKYKMCMQTKAMSEASHGQLGELLFKQEIEVHLSSQKQMNRGA
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaacggtggcttttagccctgtcggcccgggtcggcctcactgtgctaggcctc
tgctgctgcctgtccctgttctaccttctcgcctgtaaaccgacgtctcacagcagccag
cagtctctgctgtggtctagtggggccaccagtaaggaaggatacatggccttgttgcaa
gagagggaggactcacacagacattacatcaacagcctgacgaagcagatagcccagctg
aaagaagctctccaggagaggacgcagcagcttcaagagtccctggagaaagctaaaaca
agagggatttttcctcagggtctggagagtctgcacagaattccaacacagactgacctt
aaggatttcctacgctcccagttgaaccaggcagaggtgaactcaggtgcaaagctctcc
agcgaatatgcagtgattccttttgacactttcaccctgcggagggtgtaccagctggag
acagggctgacaaggcaccccgaggagaggcctgtgaggcgagaccgcagagacgagctg
ataagcacagtggaaacagctctgcacgtcctgaacggacctcagcaacacactgacaac
accagacagaagcgcacatactccccttccgacttcatagaggggttgacccgtaccgag
cgggacagaggaactgtttacgagctgatgtttaaaggcgcaggcccacaggacttcaca
cagcttgtgctcttcaggccatttggtcctgtgatgaaggtgaaaagcgagagcgtggac
acgcgcagcatgctcatcaacatcattgtacctctttccaagaggccagacgcattcagg
cagttcatcaaaaacttcagagaggtttgcattcggctggacggtagggtgcatctgact
gtggtctactttggtcgagatcagatagaccaagtgaaggcaatgctggaccagaccacc
agagagactcggttcaggagcttcactttgatccagctgaatgaggagttttctcgtggt
cggggcttagaagtgggctccagggcctggaggcgcagtcagaatgtcctgctcttcttc
tgtgatgttgacatccacttcaccgctgactttttaacttcctgtcgtctcaacgcagaa
cctggtaagaaagtgtactatccagtgctctttagccagtacaacccatctattatctat
agtaatgagacacttctaccctccattcaacaacaactggtgataaagaagggaactgga
ttctggagagactttggatttggcatgacatgccagtacaggtcggatttcctcaacata
ggtggttttgaccgtaacattaaaggttgggggttggaggacgtgcacctgtacaggaag
taccttcacagtaagctgatggtgattcgctctccgtccagaggccttttccacttgtgg
cacgagaagaactgtggcgatgagcttcctccagacaagtacaagatgtgtatgcagacc
aaagccatgagcgaagcctcgcacggtcagctgggggagctgttattcaaacaagagatt
gaggtgcatttgagctcccagaagcagatgaacagaggagcatga
DBGET
integrated database retrieval system
