Etheostoma cragini (Arkansas darter): 117945395
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Entry
117945395 CDS
T07493
Symbol
ppil2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117945395 (ppil2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecra03041
]
117945395 (ppil2)
03110 Chaperones and folding catalysts [BR:
ecra03110
]
117945395 (ppil2)
04121 Ubiquitin system [BR:
ecra04121
]
117945395 (ppil2)
Enzymes [BR:
ecra01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
117945395 (ppil2)
Spliceosome [BR:
ecra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
117945395 (ppil2)
Complex C
U4/U6.U5 tri-SnRNP related factors
117945395 (ppil2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
117945395 (ppil2)
Chaperones and folding catalysts [BR:
ecra03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
117945395 (ppil2)
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
U-box type E3
117945395 (ppil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
117945395
NCBI-ProteinID:
XP_034728750
LinkDB
All DBs
Position
5:complement(25471603..25499243)
Genome browser
AA seq
525 aa
AA seq
DB search
MGKRQHQKDKMYITCSEYTHFYGGKRSEIPQANFRRLPFDHCSLSLQPFEYPVCTEEGVV
FDLLSIVPWIKKFGTNPISGEKLEAKSLIKLNFAKNNDGKYHCPVLYNVFTNNSHFVANK
VTGNVFSYEAVEQLNIKTKNFKDLLTDEEFTRKDIIVLQDPTNLDKFNVSDFFHVKNNLK
VLDPDEEKAKLDPAYHLKTTNLETRETLAELYKDYKGDQILAATMKEPEAKKTDKFNAAH
YSKGTVSSSFTSTAMTPETTQVADAIADDVVRYQYVKKKGYVRLHTNKGDLNLELHCDKV
PKAGENFIRLCKKGYYDGTVFHRSIRNFMIQGGDPTGTGTGGESFWGKPFKDEFRPNLSH
AGRGILSMANSGPNTNKSQFFITFRSCTYLDRKHTIFGRVVGGFEALTAIENVESDPKSD
KPKSEIKLISATVFVDPYEEADAKIAAEREKELHREEEERQQTSIVRKKAKEEQAPQTFK
AGVGKYINPATTKRPAAKDESGPSTSGAVPKKSKGKASFGDFSSW
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcggcagcaccaaaaagacaaaatgtacattacatgttcagagtacacacac
ttttatggagggaagcgatcagaaatcccacaggcaaacttcagacggcttccatttgac
cactgcagcttgtccctgcagccgtttgagtatcctgtctgtactgaggagggagttgtc
tttgacctgctgagcattgtcccatggatcaagaagtttggtactaatccgatctctgga
gagaaactggaagcaaagtctctcatcaaactcaactttgccaagaacaacgatggaaag
tatcactgccctgttctgtacaacgtcttcacaaataattctcacttcgtggccaacaag
gtcaccggcaatgtgttttcttatgaggctgttgagcaactcaacattaagaccaaaaat
tttaaagatctgctgacagacgaagaattcaccagaaaggacatcatagtgcttcaggac
cccacaaacctggataaattcaatgtttctgacttcttccacgtaaaaaacaacctgaag
gttttggatcctgatgaggaaaaggccaagctggacccagcgtaccacctgaaaaccacc
aatcttgagaccagggagaccttagctgagctctacaaagactacaagggggatcagatc
ctggctgccacgatgaaggaaccagaggccaagaagacggacaaatttaacgctgcccac
tactctaaaggcactgtttcttcctccttcacgtcaacagccatgactcctgaaacaaca
caagtagcagatgccattgcagacgacgttgtgcgttaccagtacgtgaagaagaaaggc
tacgtccgtctacacacaaacaagggagacctgaaccttgagttgcactgtgataaggtt
cccaaagctggagagaatttcatccgtctgtgtaaaaaaggctattatgatggaacagtc
tttcacagatccatccgaaatttcatgattcaaggaggggaccccactggcaccggcaca
ggaggagaatccttctggggaaaaccgtttaaggatgagtttcggcccaacttgtctcat
gccggccgggggattctcagcatggcaaactctggcccaaacaccaacaaatctcagttc
ttcatcacgttccggtcatgcacctacctcgacaggaagcacacaatatttggaagggtt
gttggtggatttgaggcactcacagccatagagaatgtggaaagtgatcccaaatcagac
aaaccaaagtcggagatcaagctcataagtgctactgtgtttgtggacccgtacgaagaa
gctgacgcgaagattgcagcagagcgagaaaaggagctgcatagggaggaggaggagagg
cagcagaccagcatcgtccggaaaaaagctaaggaggagcaggcgcctcagaccttcaaa
gcaggcgtggggaaatacatcaaccctgctacaacaaaacgtccggctgctaaagatgaa
agcgggccgtccaccagcggagcagtgcccaagaagtccaaaggcaaggccagcttcgga
gacttcagctcctggtag
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