| Entry |
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| Symbol |
smarcb1a
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| Name |
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A
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| KO |
| K11648 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 |
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| Organism |
ecra Etheostoma cragini (Arkansas darter)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:ecra00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117945424 (smarcb1a)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117945424 (smarcb1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:ecra01009]
117945424 (smarcb1a)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:ecra03021]
117945424 (smarcb1a)
03036 Chromosome and associated proteins [BR:ecra03036]
117945424 (smarcb1a)
Protein phosphatases and associated proteins [BR:ecra01009]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117945424 (smarcb1a)
Transcription machinery [BR:ecra03021]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117945424 (smarcb1a)
SWI/SNF complex
117945424 (smarcb1a)
Chromosome and associated proteins [BR:ecra03036]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117945424 (smarcb1a)
PBAF complex
117945424 (smarcb1a)
SWI/SNF complex
117945424 (smarcb1a)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
5:27040682..27048827
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| AA seq |
373 aa
MALSKTFGQKPVKFQLEEDGDFYMIGSEVGNYLRMFRGSLYKRYPSLWRKLASVEERKKI
VESSHDHGYTQLATSVTLLKASEVEEILEGNDEKYKAVSISTEPPAYLREQKAKRNSQWV
PTLPNSSHHLDAVPCSTTINRSRLGRDKKRTFPLCFDDHDPAVIHENATQSEVLVPIRLD
MEIEGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPTDS
ILEEQTDQRVIIKLNIHVGNISLVDQFEWDMSERENSPEKFALKLCSELGLGGEFVTTIA
YSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNT
RRMRRLANTAPAW |
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| NT seq |
1122 nt +upstreamnt +downstreamnt
atggcgcttagcaaaacgtttggccaaaaaccggttaaatttcagcttgaggaggatgga
gacttttacatgattggatcggaggtggggaactacctccgtatgttcagaggctctctg
tataaaagatacccgtcattatggagaaaactggcttcggtggaagaacggaagaaaata
gtggagtcatcacacgatcacggctacactcagctggccaccagtgtgactctgctgaag
gcttcggaggtcgaggagatactcgaaggaaacgacgagaagtacaaagctgtctctatc
agcacggagcccccggcctacctcagggagcagaaggcgaagaggaacagtcagtgggtt
cccacgctgcccaacagttcacaccacctggatgcggttccctgctccaccaccatcaac
cgcagccgactgggccgcgataagaagaggaccttcccactgtgctttgacgaccacgac
ccagcagtgatccacgaaaacgccactcagtctgaagttctggttccgatccgtctggac
atggagattgagggacagaagctcagagacgcgttcacctggaatatgaacgagaagctg
atgacgccagagatgttcgccgagatcctttgcgacgacctggacctcaacccgctggcc
ttcgtccctgccatcgcctcagccatccggcagcagatcgagtcttatccaacagacagc
atcctggaggagcagacggaccagcgggtcatcatcaagttgaacatccatgttgggaac
atctccctggtggaccagtttgagtgggatatgtctgagagggagaactctccagagaag
tttgccctgaagctgtgctctgagctgggcctcggcggagagtttgtcaccaccatcgcc
tacagcatccgcggtcagctgagctggcaccagaggacgtacgccttcagtgagaacccg
ctgcccacagtggagatcgccattagaaacacaggcgatgccgaccagtggtgccccctg
ctggagaccctgacggacgctgagatggagaagaagatcagggatcaggacagaaacacg
aggcgaatgaggcgattggcgaacacggcccccgcgtggtag |
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