Etheostoma cragini (Arkansas darter): 117945457
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Entry
117945457 CDS
T07493
Symbol
apba1a
Name
(RefSeq) amyloid-beta A4 precursor protein-binding family A member 1 isoform X1
KO
K04531
amyloid beta A4 precursor protein-binding family A member 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117945457 (apba1a)
Membrane trafficking [BR:
ecra04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
117945457 (apba1a)
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
117945457 (apba1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PID
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
117945457
NCBI-ProteinID:
XP_034728829
LinkDB
All DBs
Position
5:2621836..2655880
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AA seq
959 aa
AA seq
DB search
MNPEETELGQEVMEENNSAPRQRHNNHNNRPRNHSNQEKRYRRFEAPAGGNAGNRARVSQ
QRRPQEEPDVELQHGSQSAQPQQPQQPQPIPRPAVTRYRRQGDSEARIRAQQQRHRQRQQ
REAEKAQQERQQHAEMTREDERERDDSVLARSASTESGFHTHTDRAEGDDGLVMMSLEPE
GQPEPEDEAGNYAVQLRPEAEGYTESAEAEQQHQQPHPNYPPQPPALPLEPLPDIQNPQR
QDEAEEMLNTGYSNYVYTRPPSHSGGMADFSASQSSESLDAVLADEAYSEPYDIYSLSEH
VYEEICDAPASVSSAADGTEDTESLQQRRAGFQLLEGLTGGGDYHQQEAVGSRLRHYDER
SDGESDSPEKEAEFAPYPRADSCDQEEDIDSIVAEVKESLSSQSLHRAAEDTIDEENELQ
QEEETSQMDSNETNSAGAPGQPARRASVSPPEEPAAARNSQEKRDAISLAIKDIREAIEE
VKTRTVRSPYTPDEPKEPIWVMRQDLSPTAECDLQSSLGGDSPGSGSPSPPGAESSSRLL
LQDDSAESSPSSKESRRSLASFPTYVEVPGPCDPEDLIDGIIFAANYLGSTQLLSDKTPS
KNIRMMQAQEAVSRIKTAQKLAQNKKKAPEGEPQPMTEVDLFISTQRIKVLNADSQETMM
DHPLRTISYIADIGNIVVLMARRRMPRSDSQENVEASDPGQDSKRQYKMICHVFESEDAQ
LIAQSIGQAFSVAYQEFLRANGINPEDLSQKEYSDLLNTQDMYNDDLIHFSKSENCKDVF
IEKAKGEILGVVIVESGWGSILPTVIIANMMHAGPAERSGKLNIGDQIMSVNGTSLVGLP
LSTCQTIIKGLKNQSGIKLNLVRCPPVTTVLIRRPDLRYQLGFSVQNGIICSLMRGGIAE
RGGVRVGHRIIEINSQSVVATPHEKIVHILSSAVGEIHMKTMPAAMYRLLTAQEQPVYI
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccgaggagacggagcttggccaggaggttatggaggagaacaactccgctcct
cgccagcgccacaacaaccacaacaaccggccccgtaaccacagcaaccaggaaaagcgc
tacagacgctttgaggcccctgctggagggaatgcaggcaacagagcgagggtgtcgcag
cagcgcaggccacaggaggagccggacgtggagctgcaacacggatctcagtctgcacaa
ccccaacagccccaacagccacagcccatcccccgacccgcggtgacacggtaccgccgg
cagggggacagcgaggcacggatcagggcccagcagcagaggcacagacagaggcagcaa
agagaggctgagaaagcacaacaggagaggcagcaacatgcggagatgacccgggaggat
gagcgagagagggacgattcagtgctggcccgctcagcgagcacggagagcggcttccac
acccataccgaccgggccgagggggacgatggtctggtgatgatgtctctggagcctgag
gggcagccagagccggaggacgaggcggggaactacgcagtccagttacggccggaggcg
gaggggtacacagagagtgccgaggctgaacagcaacaccaacaaccccatcctaactat
cctcctcagcccccggcactgccacttgagccccttcctgatatccaaaacccccagaga
caggatgaagcagaggagatgctgaacactggctactccaactacgtctacacccggccc
cccagccactccggagggatggccgacttctcggccagtcagagctccgagagtttagac
gctgttcttgcggacgaagcctactctgagccatatgacatttactcactctctgagcat
gtttacgaggaaatctgcgacgctccggcttcagtttcctccgctgcagacgggactgag
gacacagagtctctccaacagaggcgggctggctttcagctgttggagggtctgacgggg
ggtggagactaccatcagcaggaggcggtgggctcccgtcttcgccactacgacgaacgc
tctgacggcgagtcagacagccctgagaaggaggcggagttcgccccgtatccacgcgca
gacagctgcgaccaggaggaggacatcgacagcatcgtggctgaggtcaaagaaagcctg
agctctcagagtcttcatcgtgctgcggaagacaccatagatgaagaaaatgagctacag
caggaagaagaaacgtctcaaatggactctaacgagaccaacagcgctggcgccccagga
cagccagccagaagagcgtctgtgagtcctccagaggagcctgcagcagcgaggaacagc
caggagaagagggacgccatctccctggccatcaaggacattagggaggccatagaggag
gtgaagaccagaacagtaagatctccatacacacctgatgagcccaaggagcccatctgg
gtaatgaggcaggacctgagccccaccgctgaatgtgacctccagtcatcacttgggggg
gactctcctggttcaggctcgccctctcctccgggagccgagtcgtccagcagactgctg
ctgcaggatgacagcgctgagtcttctccctccagtaaagagtccaggagaagccttgcg
tctttccccacgtatgtagaagtcccgggcccctgtgaccccgaggacctgatcgatggg
atcatcttcgccgccaactacctgggctccacccagctgctgtcggataagactccgtcc
aagaacatccgcatgatgcaggcacaggaggccgtcagccgcatcaagacggcccagaaa
ttagcccagaacaagaagaaggcccctgagggtgagcctcagccaatgacagaggtggat
ctcttcatctccacgcagagaatcaaagtgctcaacgctgactcccaggagaccatgatg
gaccaccctttgcggaccatctcctacattgctgacattggcaacattgtggtcctgatg
gcccggcgcaggatgcctcgatccgactctcaggagaatgtggaggcctcagacccgggc
caagacagcaagcggcagtacaagatgatctgccacgtgtttgagtctgaggatgcccag
ttgattgcccagtccatcgggcaggccttcagtgtggcttaccaggaatttctacgagcc
aatggcattaacccagaggatctgagccagaaggagtacagtgacctgctcaacactcag
gacatgtacaatgatgacctcatccacttctccaagtctgagaactgcaaagatgtgttc
atagagaaagccaagggggagattctgggcgtggtcattgtggagagtgggtggggctcc
atcctgcccactgtcatcattgccaacatgatgcatgctgggccggctgagaggtctggg
aaactgaacataggagaccagatcatgtccgttaatgggacaagtctggtgggactgccc
ttgtccacctgccagaccatcattaagggtctaaagaatcagtctggaatcaagctaaac
ctcgtcagatgccccccagtgaccactgtactcatcagacggccagacctccgctaccag
ctgggcttcagcgtccagaatggcattatctgtagccttatgcgtgggggcatcgccgaa
cgtggcggggtcagagtgggtcaccgcatcattgagatcaacagccagagcgtggtggcc
acgccccacgaaaagattgtccacatcctgtccagcgctgtgggagagatccacatgaag
acgatgcctgcagccatgtaccgcctgctgaccgcccaggagcagccagtttacatttaa
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