Etheostoma cragini (Arkansas darter): 117945472
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Entry
117945472 CDS
T07493
Name
(RefSeq) rho guanine nucleotide exchange factor 28-like isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117945472
Membrane trafficking [BR:
ecra04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117945472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
PH
Ank
Ank_2
PH_13
C1_2
PHDvar_NSD
PHD_2
Motif
Other DBs
NCBI-GeneID:
117945472
NCBI-ProteinID:
XP_034728853
LinkDB
All DBs
Position
5:20806874..20845653
Genome browser
AA seq
1811 aa
AA seq
DB search
MELSRRKVPLYGQAKVFALLEGLDSVPDDAEVYIVLEGSTLVHVTMAQSDVMLCFIVPGH
NLAEVVSVQAYLCSETTPLTWVGGASLEYVQDDAQDLAEHLVIHGHCLSSTDHKELSCLF
SLGEESSRWAIDRRVALAMANLDIPPNWNVLGSHNGDEHSLRESPLHLAVRWGLYRLAEL
LLCQPGGLMAVSLPNEEGVTPLQLAQTAGSTELLELLTHPPNPLATPPAGLSQVWADRSR
LLRFCHDTGNLTLTVRQNLRWSSEESRHADILLLRDRLRDEDFLRELKALRRERVETILV
KNVENALYSDMNGAAVEKHDYEESLMFCLIEEDEEDDPSKSYSEKSQSIRETQAPSPTLA
AAARLSAMIHGKDRVYANAMLVDQVDDADIKYHSPGEGRVIPAPHLGSPSWDSFSMTPPD
SGNCSQNQHPSSPYNRDRGIQAPGRENNKEPSPCISPPSPFTSSPSFPSSPLASASRLFE
GAQRHPMQPFLPVSPALNCRGCSLTEDSRGLSPSLEFDSGEEDFLLRSYPCSSIKKQSTL
RSSSGEQKDSFNTSPDFNHTHSDSTYTSTKNPEESEVRLRSYSYSSPKAKPSRPLLNRDA
AITDLTEELRAFSPTESTREKRVLGFRKRAQSAEEESSPSLQHLTLTEFLKEIEDEELDK
YIIPSKVESEKYKVSRTFSFLKSRMSSTRNKTKLKGKEVKEGKEKSGATNGHQFVPVSPS
GPALCVACDKSVSGKELLQCSNCFLNVHKNCRESVAPCGKKLQERNALLTKSKTLSLPHN
SGKDNSPASIFSSSSTLPTTTREKRETDAPLSKSLSISIDSRRLSDAAGVDSECSVTACT
NSSLSDEGTAVSVEPPITTHDAVDAPLMSDLSADLLGLEVESWSLAVSPEFCRQHDRRTI
KRQDVIYELMQTELHHIQTLTVMSEVFRRGMLEELQLDWDCVARIFPCLDPLLLFHRNLF
GSLQERRQASTQPENPRNYLIHQIGDILLQQFSDEHAEKMKQVYGEFCSHHTEAVNVFKE
LQQQNKKLQNFVKQQSNNTLVRRREVPEFILLVTQRITKYPVLLERILHYTQEGSQEHSD
LSSAVAQIRDIIAAVDLTVNKYERCQEMQEVLARLENKSFAKLKNDKVFRKQDLHSKHRD
LHYKGLVYWKTATGRLKDTLALLLTDVLVFLQEKDQRFVFAAVDQKPPVIPLQKLIVREV
ANEERGMFLISASSLGPEMYEVHTTTRDERNAWMRHIRQAVESCPEEEEEEEEQQQRNAE
TEEARRVAEVRVQKITKFQETLLGQDQQICNSLEEKLQLYAELTELTLRSPEPVPHRHLL
VRADIDSERPQQASSLLTAALREAENLITILQAGDGLTIKGPSSPVQGPECCSYNSHGSS
IQESPSEPDYLSTLSMSSTSLGSDSELTGLDSVLWSSAVELRRGDTKGTLFKVAESVQSL
TQLLYSLQAAVTLQDSCYEVQKLLLQEGERTPLRTLTSLQNSLEQEKKKSIDNKKEEVEK
KGLERKKDKVDEMKKLHVKLRQEQQRWDKECLAREKQQCEQDSVLEQREQHCRLEAERLR
CEREELDAQLLEYQQNLDRLREGQRSVEREKEKIEAQQRLLQTWRHNRQSSLPVTIPMDG
YKVSGHSRSGSLDSNCSVYKNEVALLASLQQNHLHQLAKNNPHQRLLAAPIKNHDSPRNS
SSYTANIGLSASLYNSLNTLLSQAHSKQPPDGLTYPNYSNNHGCPRPLNDTIHPFSSRVT
AQPQKTNNTDFSPPLDRRSLGPWRSEVTGHRLYEDAYSSSLSLTPLLPPQAYLSLEGQNG
EEGSEENIVYL
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atggagctgagcaggaggaaagtgcctctgtatggccaggcaaaggtatttgcattgctg
gagggtttagactctgtgcctgatgatgcagaggtctacattgttttggaaggatctaca
ctggtccatgtcaccatggctcagagtgatgtaatgctctgctttatagtgcctggacat
aacctggctgaggtggtctctgtccaggcttatctgtgctctgaaaccacacccctcacc
tgggtgggcggagcttcactggaatatgtccaagatgatgctcaggacctggctgagcac
ctggtaatccacggacattgcctgagctccacagatcacaaggagctgagctgcctcttc
agcctgggcgaggagagctctcgctgggctatagatcgtcgcgtggccttggccatggcc
aatctggatatccctccaaactggaatgtactggggagccacaatggagatgagcacagt
ctcagggagtctcccctccacctggccgtgcgatggggtctgtatcggctggcagagctg
ctgctttgtcagccggggggtctgatggctgtcagtctgccaaacgaagagggagtcaca
ccgctgcagctggctcagacagcaggcagcaccgagctcctggagctgctcacacaccca
ccaaaccctctagccacgcctccagcaggtctgtctcaggtgtgggcagaccggtcccgc
ttgctgaggttctgccatgatacggggaacctgactctgaccgtccgacagaacctgagg
tggagctcggaggagagtcggcacgctgacatcctgcttctcagagaccgactcagagat
gaggacttccttagagagctcaaagctctaaggagggaacgggtggagaccatcttagtg
aagaacgtggagaacgcactgtattcagatatgaatggagctgctgtagaaaaacatgac
tatgaggagtcgctgatgttttgcctgattgaagaagacgaggaggacgatccatcaaag
tcttactctgagaaaagccagtccattagggagacccaggccccgtccccgactctggct
gcagctgccagactgtcagcgatgatacatggcaaagacagagtatacgctaatgctatg
ctggtggaccaggtggatgacgctgacattaaataccactctccaggggagggcagggtg
atccctgcaccccatcttggcagccctagctgggactccttctccatgactccccctgac
tcagggaactgctcccagaaccagcacccatcatcaccctataatagggacaggggaatc
caagcccccggccgggagaataacaaggagccatccccttgcatctctcccccctctccc
tttacttcctccccgtcttttccttcctcccccctcgcttccgcctcccgtttgttcgag
ggagcacaacggcatccaatgcagccatttctgccagtttctcctgctttgaactgcaga
ggatgcagcttaactgaggatagccggggcctaagtcctagtctcgagtttgacagtgga
gaagaagatttcctgctacgctcctacccctgctcatctataaagaagcagtccacccta
cgatccagctcaggagagcagaaggactctttcaacacgtcaccagactttaaccacaca
cactctgacagcacatacacgtccaccaagaacccagaggaatccgaggttcgcctgcgc
tcctactcctactcctctcccaaggccaagccgtcacggccactgctaaaccgagacgca
gccatcactgacctgacagaagagctgagagcattcagcccgactgagtctaccagagaa
aagagggttttgggtttccgtaaacgggcccaatcagcagaggaggagagcagcccatcg
ctccaacacctcaccctcacagagttcctcaaagagatcgaggatgaggagttggataaa
tacataatcccgtctaaggttgaatcagagaagtacaaagtcagccggaccttcagcttc
ctcaagagcaggatgtccagcactcgcaacaagaccaagctgaaggggaaagaggtgaag
gagggaaaggagaagtcaggagccactaatggacaccagtttgttcctgtgtctccatct
ggtcccgctctctgtgtggcatgcgataagtctgtttctgggaaggagctgttgcagtgc
tccaactgtttcttgaatgtccataaaaactgcagagagtctgttgcaccctgtggaaag
aagctgcaggagaggaatgcattgctgactaaaagcaagaccttgtctctcccacacaac
tctgggaaagacaactctcctgcctccattttctcctcttcgtctacacttcccacgaca
accagagagaagagagaaacagacgcccctctctccaaaagcctctccatctcaatagac
agcagacggctgagtgatgcagcaggggtcgacagtgagtgcagtgtgacagcttgcact
aacagctcattgtctgatgagggaacagcggtctcagttgagccaccaataaccacacac
gatgctgttgatgctcctctaatgagcgacctgtcagctgacctgctgggacttgaggtg
gagtcatggagtctggcggtcagtccagagttttgtaggcaacacgacaggcgcaccatt
aaacgacaggatgttatttacgaactgatgcagaccgagcttcaccatatccaaaccctg
acagtcatgtcggaggtgttcaggagaggcatgctggaggagctgcagctcgactgggac
tgtgtggcccggatctttccctgcttggaccccctgctgctgtttcacagaaatctcttt
ggatcactgcaggaacgcagacaggcttcgacccaaccggagaacccccggaattacctc
atccatcagattggagatattctgcttcagcagttctcagatgaacatgctgagaagatg
aagcaggtttatggagagttctgcagccatcacactgaggccgtcaatgtcttcaaagag
ctgcagcaacaaaacaaaaaactgcaaaactttgtcaaacaacagagcaataacactctg
gtcaggcggagagaggtgcccgaatttatcctgctggtcactcagcgcatcaccaagtac
ccagtgctgctagagaggatattacattacactcaggagggaagtcaggaacactctgac
ctgtcaagtgctgtggctcagatccgtgacatcattgctgctgtggacttaactgtgaat
aagtatgagaggtgtcaggagatgcaggaagtgctggcccggctggagaacaagagcttc
gccaagctaaaaaatgacaaggtgtttcgcaaacaggatctgcatagcaaacacagggat
ctgcattataaagggcttgtctactggaagactgccacaggacgtctgaaagatacgttg
gctctcctgcttacagatgttctggttttcctacaagagaaagatcaacgctttgtattt
gctgctgtggaccagaagcctcctgtaatccctctgcagaagctcattgttagagaagta
gccaatgaggaaagaggaatgttcctcatctccgcctcctcattgggtccagaaatgtat
gaagttcacaccaccactagagacgagaggaatgcgtggatgagacacatacgtcaagct
gtagagagttgtcctgaggaagaggaggaggaggaggagcagcagcagcgaaatgctgag
acagaggaggccagaagagtggcagaagtgagagttcagaagatcaccaagttccaagag
acgctgttgggtcaggaccagcaaatctgcaacagccttgaggagaagttacagctttat
gctgagcttacagagttaacgcttcggtcaccagaacctgttccacatcgccatctgctg
gttcgagcagacattgacagtgagaggccacagcaggcctcgtcactgctcacagctgca
ctcagagaagcggagaacctgatcaccattctgcaagctggtgatggccttaccattaaa
ggtccgagctctccggtccaaggaccagagtgctgcagctacaacagccacggcagcagc
attcaggagtctccctctgagccggattatttgagcacgctcagtatgagctccacctct
cttgggtcagacagcgagctgacggggctagacagcgttttgtggagctctgctgtcgag
ctgagacgaggagacaccaaagggacactgtttaaggtggcagagagcgttcagagtctg
actcagcttctctatagtctgcaggctgctgtgaccctccaggacagctgctatgaagtc
cagaaactcctccttcaggagggagaaagaacccctctccgaaccctcacttccctccaa
aacagtctggagcaggagaaaaagaagagtatcgataacaagaaagaggaagtagaaaag
aagggtttagaaaggaaaaaagataaggtggatgagatgaagaaactccacgtgaagctg
agacaggagcagcagcgctgggacaaagagtgcctggccagagagaaacaacaatgtgaa
caggacagtgtgctggagcagcgggagcagcattgccgcctggaggccgagcgtctgcgc
tgtgagcgtgaggagctggacgctcagttgctggagtatcagcaaaatctggaccgactg
agggagggccagaggagtgtggagagggagaaggagaagatcgaagcccagcagcggcta
ctgcagacctggagacacaaccgtcagagcagcctgcctgttacgataccaatggatgga
tacaaggtgtctggccacagccgctcaggcagcctggattctaactgttcagtgtacaag
aacgaggtggctttacttgcctccctccagcagaaccacctccaccagctcgccaaaaac
aacccacaccaacgtctgctcgctgctccgattaaaaaccatgacagccctcggaacagc
tcaagctacaccgctaacatcggccttagtgccagcctttacaacagcctcaacaccctg
ctgagccaggcacacagcaaacagcctccggatggtctgacatacccaaactacagcaac
aaccacggctgcccccggcctctgaatgacaccatccaccccttcagcagcagggtcact
gcacagccacaaaagaccaacaacacagacttcagcccaccgttggacaggcgatcccta
ggtccctggaggtcagaggtcacaggtcacagactttatgaggatgcctactcctcgtct
ctctcgcttacacccctccttcccccacaggcctacctctctcttgaaggacaaaatggg
gaggagggaagcgaggagaacattgtttatctttga
DBGET
integrated database retrieval system
