Etheostoma cragini (Arkansas darter): 117945502
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Entry
117945502 CDS
T07493
Symbol
ufd1l
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1 isoform X1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117945502 (ufd1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecra03009
]
117945502 (ufd1l)
Ribosome biogenesis [BR:
ecra03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
117945502 (ufd1l)
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
Motif
Other DBs
NCBI-GeneID:
117945502
NCBI-ProteinID:
XP_034728918
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Position
5:20526859..20530300
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AA seq
311 aa
AA seq
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MFSFHVFDHPMSRGFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLN
ITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVA
TYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVVAINYNEKIYELRVMETKPDKAV
SIIECDMNVRSYILSQKTVNYSVVLHFKCFVTLFLRWILMLPWVTKSLNDDLSTRKNQQR
KKQIPPVTKTWTWDSELSLALAIVWMVKQKGLSPAPPLLAQVTSKEVFPTTNSKLAGSPS
SETQGLCPGKL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgttttccttccacgtatttgaccacccgatgtcccgggggtttcagaaccgcttctct
actcagtaccgctgctactcggtgtccatgctggcaggtcccaacgaccgctccgacgtg
gagaaaggaggcaaaataataatgccaccttcagctctcgaccagctcagcaggcttaac
atcacctatccaatgctgttcaagctgaccaacaagaactcagacagaatgacccactgt
ggtgttctggagtttgtggcagacgagggaatctgttacctgccacactggatgatgcag
aatctcctgctggaggaaggtggcctggtccaagtggaaagcgttaaccttatggtggcc
acctactcaaagtttcagccacagagccccgacttcctagacattacaaaccccaaggca
gtactggagaatgcgttgagaaactttgcctgcttgacaactggtgatgtcgtagctatc
aactacaacgaaaagatatatgagctgcgagtaatggagaccaagccagataaagcagtg
tccatcatcgagtgtgatatgaacgtaagatcctatatattatcccagaaaacagtgaat
tattctgttgttctccactttaaatgttttgtgactttgtttctcaggtggattttgatg
ctcccttgggttacaaagagcctgaacgacgacctcagcaccaggaagaaccaacagagg
aagaagcagatccccccagttacgaagacatggacctgggattcagagctttcactggct
ctggcaatcgtttggatggtaaaacaaaagggattgagcccagccccgcccctcttggcc
caagtgacatcaaaagaggtattcccaactacgaattcaaagttggcaggatcaccttca
tcagaaactcaaggcctctgcccaggaaaactttag
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