Etheostoma cragini (Arkansas darter): 117945531
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Entry
117945531 CDS
T07493
Symbol
zgc:152968
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117945531 (zgc:152968)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecra03009
]
117945531 (zgc:152968)
Ribosome biogenesis [BR:
ecra03009
]
Eukaryotic type
Pre-60S particles
RNases
117945531 (zgc:152968)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
REX3_middle
Zwint
THOC7
KIX_2
Motif
Other DBs
NCBI-GeneID:
117945531
NCBI-ProteinID:
XP_034728975
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Position
5:22640441..22651228
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AA seq
1197 aa
AA seq
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MFPSSGLFACIHCPFSKRGHCERPHCLYKHATELRDTFGASYKPSIVVAGLQNVYPVNNE
TREDGLQELERINKEIETVRHEVEQEQRRLSRYQTVQAESINTMPNFSVSKSETADKHVD
IGSYGLSSCTDSNKTFSRARKYVVDNSKPRTDLEYDPLSNFSAGLRSYSSSGKEQKVRNG
PGSKQTINAVPCDQKKPVACQSPVSRSPSPEPFDDSNEDCVLIIDIPPSPDKKRARVQKP
VYSVGGKSLHVAMVEESEEVQTPISHLNTEACKVTYQPTSVMEGNRVYSNCSAENNHSPS
NLYENKECENISVDGSVVNLTGCLEDLQSESQKMTHFHATETLQTPTSPPATTDLQDQNW
SNLVGEKEENVFQVELPQCELTHCVKKMNPQQPHNFPPSNSLFYKAPIANSDLPCRQHTK
QALTGEQPTQNRVSNQWSSTKCVPSVLPHSQIMSSKIPGQIQAKAAAPVGYLAPEETALD
SSQTWHNSASSLANRAELSSGSTEQLFGTENEAIIICSSSDDESVLNYSEMELSDSDPME
ECYRIFMEANEDKGNDKQPEVSVGAMAEEKPSVKPQALPIKKRVAHEAKHTEQPVANSRP
QPQVLVPLRVSGFASQPSITPKIQQVQQGASMLTASVKGGQAFLSSCQRKPDTQTAPFPL
TQSPENLQPAPVQNTYMNYISLGTAVIGVGNNLHLILPEGTFPLPVTSSSSQVTSVLTPL
SHVYTSTAAVRQIYNPTAVTPVQRYRTTAPVLIPAPARKPSLSSALSSAHSSPAVSTTPL
AAVHSTVKAVPTKRKWKQQCEAAKDKVPHDIRQRYVNMFTEEFLKTTANVNDAFEKALAE
EKAVYNRSVNKLKYLSVAVNALKKLKNQYAVAAKDENEVNSQRSKGNIPLNLKNSRENAD
MSFYESLKDYILTEEKLVESNYPVPHPEKPGWAVLFADNKKGSADPFKRICCRCGATYSV
NQMGKHTRKEECNYHYGKGVTKKVPGGVETRYSCCEGVMGAPGCQVFKLHVHDSLSLNGF
VSTAPRHASDKICPGVYSLNCEMCYTIHGLELSRVTVVNSSLHVVYDTFVRPENEAIDFN
TRFSGISEEDVKGNCTSLTEVQKTLLSFISADTILIGHSLETDLCALKLLHGVVVDTSVV
FPHRLGLPHKLTLNNLTAEYLRRIIQESVCGHDTAEDAAACMELMLWKVKEDGKLKK
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgtttccctcgtctggcctctttgcttgtatacattgtcctttttcaaaacgtgggcat
tgtgagcggcctcactgtttgtacaaacatgccacagaattgcgggatacgtttggtgcc
tcgtataaaccatcgatagttgttgcaggactgcaaaatgtctatccagtgaacaatgag
accagagaagacggcctccaggagctggagcggatcaacaaggaaattgaaactgtaagg
catgaggtggagcaggagcaaagacgactgtcacgctaccagactgtacaggcagagagc
ataaacactatgcctaatttctctgtttccaagtctgagactgcagataaacatgtagac
ataggttcttatgggctgtcttcatgcacagactcaaataaaacattctcccgagcaagg
aagtatgtggttgacaactcaaaaccaaggactgacttggagtatgaccccctgtccaac
ttttctgctggcttacggtcttatagctcatcaggtaaagagcaaaaagtgagaaatgga
ccgggttcgaaacaaacaattaacgctgtaccttgtgaccaaaagaagccagtcgcatgt
cagtcgccggtttccagatcaccatctccagagccatttgatgactccaatgaagactgc
gtcctgattattgacattccgccctcgcctgacaaaaagagagcaagagttcagaaaccg
gtttattctgttggtggcaaatccctccatgtagctatggttgaggaatcggaggaggtc
caaacacctatttcacatctaaatacagaagcgtgcaaggtaacatatcaacctacatca
gtgatggaaggcaatagggtttatagtaattgcagtgctgaaaacaatcacagtccatca
aatctttatgaaaacaaagaatgtgaaaatatatcggttgatggaagtgtagttaattta
actggctgtttagaagacttgcaaagtgaaagtcagaaaatgactcactttcatgctaca
gaaacattgcagacacctacaagtcctcctgccaccacagacctgcaagatcaaaactgg
agcaatctggtgggggaaaaggaagaaaatgtgtttcaggtggaattgcctcagtgtgag
ctgacacattgtgttaagaaaatgaatccacagcagccacataattttccaccatcaaat
tcacttttttataaagctccaattgctaactcagacttgccatgcagacagcacaccaag
caagccctgacaggagaacagccaactcagaacagggttagtaatcagtggtcttccaca
aaatgtgtaccatcagtgctgccgcacagccaaataatgtcaagcaaaattccaggacag
attcaggctaaagctgctgcacctgtaggctacctggcaccagaagaaacggctttagac
agtagccagacttggcataattcagcatcaagtttggccaacagagctgaattatcttca
ggatcaactgaacagcttttcgggacagaaaatgaggctataatcatttgttccagctcg
gatgatgaaagtgtactcaactattcagaaatggaactgtctgacagtgacccaatggag
gaatgctacaggatcttcatggaggctaacgaggataagggaaatgataagcagcctgaa
gtgtctgttggagctatggctgaagagaaacccagtgttaaaccccaagcattgcctata
aagaagagagtggctcatgaagccaaacatacagagcagccagtagctaatagcagaccc
cagccccaggtgcttgttcctttacgtgtgtcagggtttgcctcccagccctccatcacc
cccaagatccagcaggtacagcagggagcctccatgttaactgcttcagttaaaggtggt
caggcttttctttcctcctgtcagcggaagccagacacccagactgcaccttttccttta
acccaaagccctgaaaacctgcagcctgctcctgtgcaaaatacttacatgaactacata
tctttgggaactgccgtgatcggagtaggcaacaacttgcacttgatcctccctgagggc
acgttccccctgcctgtcacttccagttccagccaagttacttcagtgctaaccccactc
agtcatgtatacactagcactgctgctgtgagacagatttacaatccaacggcagttacc
cctgtgcaaagataccgcaccacagcacctgttctcattcctgccccggcacgcaaacct
tcactgagctcagctttgtcatcggcacattcaagtccagcggtttccactactcctcta
gctgctgtccattctactgttaaggcagtgcccactaaacggaaatggaagcagcagtgt
gaggccgctaaagacaaagtgccccatgacatccgacagcgttatgtcaacatgtttaca
gaggagttcctgaagacaacagccaatgttaatgatgcctttgaaaaggcacttgctgaa
gagaaggctgtgtataatcgcagtgtgaacaaactcaaatatctgagtgttgcagtgaat
gcactgaagaagctgaagaaccaatatgctgttgctgctaaagatgaaaatgaagtcaac
agccaaagatccaaaggaaacattcctcttaatttgaagaattctagagaaaatgcagat
atgtccttttatgagagtttgaaggactatattttgactgaggaaaagctggttgagagc
aactatcctgtccctcacccagagaaacctggttgggctgttctttttgctgacaataag
aaaggcagtgcggacccctttaagaggatctgctgtcgatgtggcgctacatactctgtg
aaccaaatgggcaaacacacccgtaaagaggagtgtaattaccactatggcaaaggagtt
acaaaaaaagtgccaggtggagtggagacccgctacagttgctgtgagggagtcatggga
gcacctggatgtcaggtgtttaagttgcatgtccatgattccctcagcctgaatgggttt
gtttcgaccgcccccagacatgcctcagataagatttgtcctggggtctactccttgaat
tgtgaaatgtgttacactattcatggtctggaactatctagagtgacggtggtcaactct
agtctgcatgttgtctacgacaccttcgtcagacctgaaaatgaggctatcgactttaac
accaggttttcaggcatcagtgaggaagatgtgaagggtaactgcacctccctcacagag
gtgcagaagaccttattgagcttcatcagcgccgacaccattctcattggacatagcctg
gaaactgacctctgtgccctgaagttgctccatggggtggtagtagacacatcagtggtt
ttccctcaccgtctgggcctccctcacaagctgactctcaacaacctcactgctgaatac
ctcaggaggatcatccaagagagtgtttgtggccacgacactgcagaagacgctgctgct
tgcatggagcttatgttatggaaggtcaaagaagatggaaaactgaaaaaatga
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