Etheostoma cragini (Arkansas darter): 117945548
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Entry
117945548 CDS
T07493
Symbol
trim36
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM36 isoform X1
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117945548 (trim36)
04121 Ubiquitin system [BR:
ecra04121
]
117945548 (trim36)
Enzymes [BR:
ecra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117945548 (trim36)
Membrane trafficking [BR:
ecra04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
117945548 (trim36)
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117945548 (trim36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
COS
zf-RING_UBOX
ANCHR-like_BBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
SPRY
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_5
zf-RING_2
Pur_ac_phosph_N
Cdh1_DBD_1
fn3
DUF1826
Motif
Other DBs
NCBI-GeneID:
117945548
NCBI-ProteinID:
XP_034729003
LinkDB
All DBs
Position
5:complement(10197390..10231496)
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AA seq
777 aa
AA seq
DB search
MSDSEDMTEFASIVERIERGEVPIKNIERELICPICKELFTHPLILPCQHSVCHKCVREL
LMLNHEDSFDASSECSLPGSPRSRVPSPSMERLDRLVRSGGSRATVRRSFGGRGRRGLRV
LSSCSSSISSPGWRRGSVTPRVTTIPCPGCQHDIDLGERGISMLFRNFTLENIVERYRQA
ARAAVAIMCNICKPPQQQEATKSCMDCKASYCNECFKLHHPWGTPKAQHEYVGPTTNFRP
KVLMCPEHEMEKVNMYCEVCRRPVCHLCKLGGSHANHKVTSMSSAYKILKEKLAKSIHYL
ISKEDQVRTQITDLDLLINQTEENGQLAERQANEHFERLFETLQERKSEMLRSIEQSRNR
RLDQLKAQVEEYQGMLENSGLVGYAQEVLKETDQSCFVQTAKQLHIRIQKATESLRTFHP
ASDPCFDEFVLNTSREETLLKEMCFGGVPDPPLIDLSSSRVYNEASICWRLSDDHLPTDH
HVLEYRRLGGASQSPSQEDGEDSGVWRATDRVYGPSTVVCDLEPDSLYSFRVRSCRNTMF
SPHSPEVTFHTPPAPAFGFLFSDKCGFSTERLVLNKRRDTVESVASMAFLLAAERVQTGS
YIGLDYIIGDMGISQGRHYWAFKVEPYSYMVKVGVASDSKLLEWFHNPRDTSSPRYDHDS
GHDSGSEEACYELSQPFILLTVGMGKLFIPKTSSSSSASTVTASSGDPGNRVLPMPQRLG
VCLDYDECRVYFYDADTMRCLYERQVDCSGTMYPAFGLMGSGKVQLEEFITAKRLTF
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactccgaggacatgacggagttcgccagcatcgtggagcggatcgagcggggc
gaggttccaatcaagaacatcgagagggagctgatctgcccgatctgtaaggagctcttc
acccatccgttgatcctgccctgccagcacagcgtctgccacaagtgtgtcagagagctg
ctgatgctgaaccatgaggactcttttgatgctagctccgagtgctccctgccgggcagc
cccaggtccagggtgccttccccttccatggagaggctagacaggcttgtgagatcaggt
gggtctcgggccacagtgcgaaggtcgtttggaggtcgaggtagacgtggcctccgtgtt
ttgagtagctgtagtagctccatctcgtccccgggatggcgcagaggttctgtgactcct
cgggtcaccaccatcccatgcccgggctgccagcatgacatcgaccttggtgagcgcggc
atcagcatgttgttccgtaacttcactctggagaacatcgttgagcgctaccgccaagcc
gcccgcgcagccgtcgcgatcatgtgtaacatttgtaagcctccacagcagcaggaggct
acaaagagctgtatggactgcaaggctagctactgtaacgagtgcttcaagctgcaccac
ccctggggtacacccaaagctcagcacgagtacgtcggtcccaccacaaattttaggccc
aaggtgctcatgtgtccagagcacgagatggagaaggtgaacatgtactgtgaggtctgc
agacgacccgtgtgccacctctgcaagctgggaggttcccacgccaaccacaaagtcacc
tccatgagcagtgcctacaagatcctcaaggagaagctggccaagagtatccattacctc
atcagcaaagaggaccaggtcaggactcagattactgatcttgacctgctcatcaatcag
actgaggaaaatggccagctagcagagcgtcaagccaatgagcactttgagcgtctgttt
gagactctgcaggagaggaagtcagagatgctaaggtccatcgaacagtctagaaaccgg
cgcctagaccaacttaaggctcaggtagaggaataccagggcatgctggagaacagtggc
ctagttggctacgctcaggaggtgctgaaagagacggatcagtcctgctttgtacagact
gcaaagcagctacacatcagaatccagaaggccacggagtctctgaggaccttccaccca
gcgtctgacccctgctttgatgagtttgtgctgaacacatctagagaagaaactctgctc
aaagagatgtgctttggtggagttcccgaccctcctctgattgacttgtccagcagcaga
gtctataacgaggcgtcaatctgctggagactgtctgatgaccacctacctacagatcac
catgtgcttgaataccgcagactcggtggcgcgagccaatccccgtcccaggaggacggt
gaggacagtggggtctggagggctacagacagggtttatggtcccagcactgtggtgtgt
gacctggaacctgacagcctgtactccttcagggtccgaagctgcaggaacaccatgttc
agcccccacagccctgaggtcaccttccacacaccacctgcacctgcttttggtttcttg
ttcagcgacaagtgtggcttcagtacggagcggctcgttctaaacaagcggcgggacact
gtggagagcgtagcgagcatggccttcctccttgcagcagaacgtgtgcagacgggcagc
tacatcggactagactacatcattggggatatgggcatctctcagggaagacactattgg
gccttcaaggtggagccgtactcctacatggttaaagttggagtggcttctgattcaaag
ctgcttgaatggtttcacaatccaagagataccagcagcccaaggtatgaccatgatagt
ggacatgacagcggcagtgaagaagcgtgctatgagctctcccagcccttcatcctcctc
accgtgggcatgggcaaactcttcatccccaagacttcttcatcctcctctgcctccacg
gtaaccgcatcctccggtgaccctggcaaccgtgtgctgcccatgccacagcgcttgggt
gtatgcctagattacgacgagtgccgggtgtatttttacgatgccgacaccatgaggtgc
ctttatgagcggcaggtggattgttcaggaacaatgtatccagcttttgggctcatgggc
agcggcaaggttcaactggaagaattcatcacggctaagagactgaccttctga
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