Etheostoma cragini (Arkansas darter): 117945591
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Entry
117945591 CDS
T07493
Name
(RefSeq) transcriptional repressor CTCF-like
KO
K23195
transcriptional repressor CTCF
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117945591
03036 Chromosome and associated proteins [BR:
ecra03036
]
117945591
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
117945591
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117945591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-C2H2_REST
zf-met
Zf-C2H2_ZNF451
zf-C2H2_jaz
zf-C2H2_6
LIM
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
117945591
NCBI-ProteinID:
XP_034729058
LinkDB
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Position
1:complement(20550972..20557176)
Genome browser
AA seq
760 aa
AA seq
DB search
MEGEIVSMETTQTAALAPEGKVLPEGGEALIQGAVITTQGEVADNMEMMVMDALDPTLLQ
MKTEVLEGGGTVTVSGGDEGQIITLQVVNMEEQTGAALGLGQLQLVHVPVTTATVEGLQA
TYVDASTTNKDTDPVICHTLPLPEGFQVVKVGANGEVETVEQEELQAAHEELQVVRGDVE
DEEEAAEIEATVPEQEQPEWSKDPEYQPITSIRSRGKKGKKSRLRYGEGDRDMDVSVYDF
EEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSH
TDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHE
KPFKCSMCDYCSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYE
CYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIEKGKK
CRYCDAVFHERYALIQHQKTHKNEKRFRCEQCDYCCRQERHMVMHKRTHTGEKPFACSQC
EKTFRQKQLLDMHYKRYHDPNFVPTAFVCGKCNKTFTRRNTMLRHSENCTGEVIEEEENG
TPAPKKARRGRKRKMQARKDDSDDTADELDEVEEEEGLSDIEVEQAPPVVPIPAPVGPPV
KRKRGRPPKSKLDTAAIIRVEDEVTGEVDDIIVKKEVGADDLEDGNNEAAQEEVVVGGGN
PTIQLEEMPQDQGTAPEVQQSEAPPNGDLTPEMILSMMDR
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgagatcgtttccatggagaccactcagactgctgccctggctcctgaagga
aaggtcctgccagagggtggcgaggctttaatacaaggggcagtcataactacacagggg
gaggtggctgacaatatggagatgatggtgatggacgctctggatccgactctgctgcaa
atgaagaccgaggtgttggagggcggcggcacggtgactgtttctggtggagatgagggt
cagatcatcacgctacaggtggtgaatatggaggagcagacaggggctgcattaggtctt
ggacagcttcagctggtgcatgtacctgtcacaacagcaactgtagagggactccaggcc
acctatgttgatgcatcaaccactaacaaggacacagatccggttatctgtcacactctt
cctttgcctgagggatttcaggtggtaaaagtgggtgccaatggtgaggtagagaccgta
gagcaggaggagcttcaagcagcccacgaggagcttcaagtggtgaggggagatgtggag
gatgaggaagaggcagcagaaatcgaagccactgtccctgagcaagaacagccagaatgg
tctaaggacccagagtaccagcccatcactagtatccgtagtagggggaagaaaggaaag
aagagccgtctgcgctatggagagggtgatcgtgacatggatgtttctgtgtatgacttt
gaagaagagcagcaggagggcctgctgtcagaagtgaatgctgagaaggttgtgggcaac
atgaagccaccaaagcccaccaaaatcaagaaaaaaggtgtaaagaagactttccagtgt
gagttgtgtagctacacctgtccaaggcgctccaacctggacagacacatgaagagccac
acagatgagagacctcataaatgtcacttgtgtggacgggcttttcgaactgtcacactg
ctgagaaaccacctcaatacacatacaggcactaggccgcataaatgcacagattgtgac
atggcgtttgtgaccagcggtgagttggtgcgtcatcgtcgctacaaacacacacatgag
aagcccttcaagtgctccatgtgtgactattgcagcgtggaggtcagtaagttgaaaagg
cacatccgctctcatacaggggagcgacctttccagtgcagtctgtgcagctatgctagc
agagacacttacaagctgaagagacacatgaggacgcattcaggtgaaaagccatacgag
tgctacatctgccatgcacgtttcacacagagcggcaccatgaagatgcatattctgcag
aaacacacagagaacgtagccaagttccactgcccacactgtgatactgtcattgcacgc
aagagcgaccttggtgttcacttgcggaagcagcactcttttattgagaagggaaagaaa
tgtcgttactgtgatgctgtgtttcatgaacgatacgctctaatccaacaccagaagact
cataagaatgagaaacgcttccgctgtgaacagtgtgactactgctgcagacaagaacgg
cacatggtaatgcacaaacgcacacatacgggggagaagccgtttgcctgcagccagtgt
gagaaaacatttaggcagaagcagcttctggacatgcactacaagcgctaccatgatccc
aactttgtccccactgcctttgtatgtggcaagtgtaacaagacgttcacccgcaggaac
acaatgctgcgtcactctgagaactgcacgggtgaggttatagaagaagaagaaaatgga
actcctgcacccaaaaaggctcgtcggggcaggaagaggaagatgcaggccaggaaggac
gatagtgatgacacagcagatgaactggatgaggtggaggaagaagaggggctaagtgat
attgaggtggaacaggccccaccagttgtccctatcccagcccctgtggggccaccagtc
aagaggaaacgtggccggcccccaaagagcaaactagacacggctgctatcatccgtgtg
gaggacgaggttactggagaggtggatgacataattgtgaagaaagaagttggagccgat
gacttggaggacggcaacaatgaggctgcacaggaggaggtggtggttggtggaggaaat
ccaaccatccagctggaggagatgccccaggatcaagggacggcaccggaggtgcagcag
tctgaagccccaccgaacggagacctcactcctgagatgatcctcagcatgatggaccgg
tga
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