Etheostoma cragini (Arkansas darter): 117945767
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Entry
117945767 CDS
T07493
Symbol
lrrk1
Name
(RefSeq) leucine-rich repeat serine/threonine-protein kinase 1 isoform X1
KO
K08843
leucine-rich repeat kinase 1 [EC:
2.7.11.1
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ecra01001
]
117945767 (lrrk1)
Enzymes [BR:
ecra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
117945767 (lrrk1)
Protein kinases [BR:
ecra01001
]
Serine/threonine kinases: TKL group
LRRK family
117945767 (lrrk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LRR_8
LRR_4
Roc
Ank_2
COR-B
COR-A
Ank
LRR_14
Beta-prop_LRRK2
Arf
Ras
Ank_4
LRR_NXF1-5
Gtr1_RagA
LRR_9
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
117945767
NCBI-ProteinID:
XP_034729387
LinkDB
All DBs
Position
1:6684920..6786734
Genome browser
AA seq
2020 aa
AA seq
DB search
MSYWSVGLPQDSGDTPSKMEQQSSPGEDMGAKASLVEGPSPGSALVPSPTLENIRAAYED
GEGEAARNLIQQACCVECSAGMPHIDGLRLLCVATQHGDLQSVRYLLKEARITVPQEPSN
SNPAILAAYYGHASLVKELLDSIPGPCLRGDLLNWMLATSCQQGHLDVVQLLVHGYDVDA
KDCAIHSNEFALITGLPLYAAAQAGNEEIACFLLQNGAGFSSYTLMDYPAFSKHLLRLRL
QETSNAEGEQAVTVCWSGLQLPWLELDWFMDVSSCITHLDLSSNSLAALPSVVPWGLIHL
QTLDLSNNLLKELPAAPSSQEVICSSLQRINLSQNQLTSLPSGFLHLTRIQRLSAAKNQL
TVLFDIPTTTNWIGLRKLEELDVSDNCLSSLPTSVMHCLKSLNFLNVCRNTLSTFPDPWA
CPLKQCKASSNLIESLPNTISIFWRTHLQEVDFSDNRLKELPSYLFELEALVSLRLCGNH
IATLPAPSKWKCSQLRTLDLSRNQLGKTEELPKSRRLAFLTTWNRRDPDPVCPIEFPMIL
RDSLEVLFLNDNQLDCVPQSVCGLHSLTELYLFNNPGIRELPAELSQLSNLWQLDTEDLN
INNVPKEVRKEGPAAVLAFLRAQIRKAEPFKLLKMLVIGPPRQGKTALLEALQTGRVAPF
TPAECSISTSTWELDKPNGGKNSKDSVAFNVWDIGGQASMSTVNQCFFTDKALYVVIWNL
ALGEEAVANLQTWLLNIEARAPNSAVVVVGTHLDLIETKFRTERLATLRAYILALCRSPS
GARASGFPDITWKHLHEVSCKTLEGLDGLKKLIYQVALSMKENRSSACGSKLLGRLIPRS
YLTLQEAVIAEKQRRDAEGEVQYLTNDQLEAIIQQNSESDIRDYEDMQTAISFLIETGTL
LHFPDTSHGLCTLYFLCPVWLSECLERIMHLKSSRSVARNGVIRAEDLRMLLVGTGFTEE
TEEQYFQFLTKFEIALPVANNSYLLPHLLPSKPAMDIYGLRQQTNNTLQRLIQMSFVPAG
FWERFIARMLISLREMDLQSFDPKRNTRSQRSRNSVIYSFAGTQQRNRCSTFRVRRSQTI
YWKEGLLVTFDGGYLSVESSDVNWKRKKSGGIKIICQSDVRDFSAMAFITDNVNSLIEQW
FPALTASESDGSLLIEQYAPCPLCALLGRQKPAELLASLACQVGDKGARGGADRGGGPAG
GVCYFNMEDCVLAAVEKEHIICPQHPEQPVPLQELVPELFMTDFPARLFLERAHLEYSEG
ESNILGQGGSGTIIYQARYRDQPVAIKRFHFKKCRQQTISSDTDTMVKHLQSADACHSFS
EFRQEASMLHSLQHPCIVSLVGISIHPLCFALQLAPLGSLNTVLEEKHKGTGSRYMPLGH
MLTFKVAYQIAAGLAYLHRKSIIFCDLKSDNILVWSLEVQDPVNIKLSDYGISRQTFHEG
ALGVEGTPGYQAPEIRPGIVYDEKVDMFSYGMVLYELLSGRRPVLGQHQFQIAKKLSKGI
RPVLGSPQEVQFCCLHSMMTECWDTKPEKRPGAMRCVRQMQEPSFPCLRYLLPCDSHSQL
FLSQLQGHSAVFWNGDKDNRSYSVVNVEKGQVQVKRMSCAGSRISCQMKIANVLWMATEE
QEVFIYSLKDMCPLSQPQKQFSCPGVITCLFPVPAREQSLARVFAGMSDGLVAVYSLVEG
LPLEGETYLCLHTLNKTVFALKDSDPRQRPYPVRSMALVNSGSQLWFSNGPGLLVIDCRS
LQAVQRLEPYNPPSSIVSMTTSFSLWGEEAVWTLDDHTNTLLLYHAASYQLCAKYSCGDS
NPLRDVFAVQCPAGVAMVRTTELKPTDQEEKLEWTEGEVTLIYSEEAGTQIIQHQDSLTE
YCSISTNCSLEPLGSDCSSTSALASLASHSSAPLPAEDQDQQASSNPTPTQLQAFTVLPV
NGTLWIPRRGGDVMVIEMQSHDDQLRGRVIAVLSPPGCSSLGNLEKAELVAKDTVVCGFH
KENMEWCLCVWRGWGCRELEVFYQSYEELSRLETSLRKRR
NT seq
6063 nt
NT seq
+upstream
nt +downstream
nt
atgtcttactggtctgttggccttcctcaggactctggagacactcccagcaaaatggag
caacaaagcagccctggggaggatatgggagccaaggcatcgttggttgagggtccaagt
cccggctctgcactggttccctctcctactctggagaacatccgggcagcctatgaagat
ggagagggggaggctgccaggaatttgatccaacaagcctgctgtgtggagtgcagcgca
gggatgccccacatcgatgggttacgtctcctgtgtgtggccactcaacatggtgatctg
cagagtgtgcgttacctcctgaaagaagcccgtatcactgtgccccaggagccatccaac
agcaacccagccatcctggcagcatactatggccatgccagcttggtcaaagagctgctg
gattccatacctggtccatgtttaaggggagatttgctgaactggatgctagccacatct
tgccagcagggtcacctggatgtagtccagctgctggtccatggctatgatgttgatgcc
aaggactgcgccatccacagcaatgagtttgctttaatcaccgggctgccgctgtacgct
gctgcacaagcaggtaatgaggagatagcttgcttcctgctgcagaacggagcaggattc
tcctcatacaccctgatggactatccagccttcagcaaacacctccttagactcagactt
caggaaacctccaacgctgagggagagcaggctgtgactgtgtgctggagtggtctgcag
ctgccatggttggagctggattggttcatggatgtctcgtcatgtatcacccacctggat
ctatcatccaacagcctggctgctctcccctccgtggtgccctggggactgatccacctg
cagactctagatctttctaacaatctgttgaaagagctgccagctgcccccagctcccag
gaagtaatctgctccagtttacagcgcataaatctctctcagaaccagctcaccagtttg
ccatccggatttctgcatctgacccgcatccagagactttctgctgctaagaaccagctc
acagtgctgtttgacatccctaccaccactaactggatcggtcttcgcaagctagaggag
ctggatgtgtctgacaactgtctgagcagtctgcccacatcagtcatgcattgtttgaaa
tccctgaacttcctcaatgtgtgcaggaacacactgagcactttccctgatccctgggct
tgtcctctgaagcaatgcaaagcttcatctaatttaatcgagagtcttccaaacaccatc
tccatcttctggaggactcatctgcaggaggtggacttctccgacaacagactgaaggag
ctgccttcatatctctttgagctagaggctcttgtctcgttgagattgtgtggtaatcac
attgcgacactcccagcccccagtaagtggaaatgctctcagctcaggaccctcgacctt
tccaggaaccagctgggaaaaacagaggagctgcccaagtcccggaggctggccttcctg
actacatggaacaggagggacccagacccagtgtgtcccatagagtttcccatgattctg
cgggattcactggaagtgcttttcttgaatgacaaccagctggattgtgttccccagtca
gtgtgtggtctgcacagcctcactgagctctacctcttcaataatcctggaatccgggag
cttccagcagagctcagccaactctccaatctgtggcagctggacaccgaagacctcaat
atcaacaatgtccccaaggaagtaagaaaagaaggacctgctgctgtcctggcattcctc
cgggcacaaatccgaaaggcagagccttttaagctgctgaagatgcttgtgattggtcca
ccgagacagggtaagacggcccttctagaggctctacagaccggcagggtggcacccttc
accccagccgaatgcagcatctccacctccacctgggagctggacaaacccaacggaggc
aaaaacagcaaggactcagtggcgtttaacgtgtgggacattgggggtcaagcgagcatg
tccacagtgaaccagtgtttcttcactgataaggccttgtatgtagtcatctggaacctg
gctctgggagaggaggctgtggccaacctgcagacatggctgctcaacatagaggctcga
gcacccaactctgccgtggtggtcgtgggaacacatttggatctcatcgagaccaagttc
cgtactgagagactggccacgctgagagcttatattctggctctgtgcagatccccgtct
ggggcccgagccagcggcttccctgacatcacctggaaacacctgcatgaagtgtcctgt
aagactctggagggcttggatgggttaaagaagctgatctaccaggtggctctctccatg
aaagaaaacagaagctcagcctgtggcagtaaactattgggcagactgatccccagaagc
tacctgacacttcaggaagccgtgatagcagagaagcagagacgagatgctgagggagag
gtccaatacctaacgaatgatcagctggaagccatcatccaacagaactcagaaagtgac
atcagagactatgaggacatgcagactgctatcagcttcttgatagagacagggaccctg
ctgcacttccccgacaccagccacggcctgtgtaccctctacttcctgtgtcctgtgtgg
ctgtcagaatgcctggagagaatcatgcaccttaagtcctctcgctctgtagccaggaat
ggagtgatccgagctgaagacctaaggatgctgttggtaggaacagggttcactgaggag
acagaggaacagtatttccagtttcttaccaagtttgagattgctcttcctgtggccaac
aacagctatttgctaccccacctccttccctccaagccagccatggacatctacgggctc
cgtcagcagaccaacaacaccctgcagcgccttatccagatgagctttgttcctgcagga
ttttgggagcgcttcattgccaggatgctcatcagcctcagagaaatggacctgcagtca
tttgaccccaaaagaaacaccaggagccagcgcagcaggaactctgtgatctacagcttt
gctggaacccagcagaggaaccgttgcagcaccttcagagtccgacgcagccagaccata
tactggaaggaagggcttctagtcacttttgatggcggttacctcagcgtggagtcatca
gatgtcaactggaagaggaagaagagtggaggcataaagatcatctgccagtcagatgtg
agagatttctctgccatggccttcatcacagacaatgtcaactctctgattgagcagtgg
ttccctgctttgacagccagtgagagtgatgggagtctcctcatagagcagtacgccccc
tgtcccctctgtgccttactgggcagacagaagccggccgagctcctagccagccttgcc
tgccaggtcggagacaaaggagcgcgtggaggagctgaccgaggaggaggaccagcagga
ggagtttgttactttaacatggaggactgtgtgctggctgcagtggagaaggagcacatc
atctgtcctcagcaccctgagcagccagtccccctccaggagctggttccagaactcttc
atgacggacttccctgcacgcctctttttggagagggcccatctggagtactctgagggg
gagagcaacatccttggccagggtggcagtggaaccatcatctaccaagcccgatatcgt
gaccagccagtggccattaaacgcttccacttcaagaagtgtcgacagcaaaccatcagc
agtgatacagacaccatggtgaaacatctgcagtccgcagatgcctgtcacagcttctct
gaatttcgccaggaggccagtatgttgcactctctacagcatccctgcattgtctctctg
gtgggcatcagcatccatccactctgcttcgccctgcagttggctcccctgggcagcctt
aacaccgtgctggaagagaagcacaaaggcacaggctccaggtacatgccccttggtcac
atgcttactttcaaagtggcctatcagattgctgcaggactggcgtaccttcacaggaag
agcatcatcttctgtgacctcaaatctgacaacatcctggtgtggtctctggaggtgcaa
gatccagttaacattaaactgtctgactatggcatttctcgacaaaccttccatgagggg
gcgttgggggttgagggcacaccgggttaccaggctcctgagatccgaccaggcatagtg
tatgatgaaaaggtggacatgttctcctatggtatggtgctgtatgagctgctgtctggg
cggaggcctgtgctgggacaacatcagtttcagattgcaaagaagctctccaaaggcatc
cgtccagtgctgggcagtccacaggaggttcagttctgctgcctccacagcatgatgact
gaatgctgggacaccaagcccgagaagaggccgggggccatgcggtgtgtgaggcagatg
caggagcccagcttcccctgcctcaggtacctattgccctgtgacagccactcgcagctc
ttcttgtcccagctgcagggacacagcgctgtgttctggaacggagataaggacaacagg
agctacagtgtggtgaatgtggagaagggccaggtgcaggtgaagaggatgtcctgtgca
ggcagcaggatcagctgtcagatgaagatagctaacgttctttggatggccactgaggag
caggaggttttcatctacagtctgaaggacatgtgtccactcagtcaaccccagaaacag
ttctcctgtccaggtgtcatcacctgcctgttccctgttccagcaagagaacagagcctg
gccagagtgtttgcggggatgtctgacggcctggttgcagtgtacagcttggtggagggc
cttcctctggagggggagacctacctttgtttacacaccctcaacaagacagtgtttgct
ctgaaggactcagatcccagacagagaccctacccagtcaggagcatggcactggtcaac
agtggctcccagttatggttctccaatggtccgggcctgctggtcattgactgccggagt
ctccaggcagttcaaaggctggagccctacaacccaccgtcctccattgtatccatgaca
accagcttcagtctatggggagaggaggcagtgtggaccctggatgaccacaccaacacc
ctgctgctctaccatgctgcctcctaccagctctgtgccaagtacagctgtggagacagc
aatcctcttcgggatgttttcgctgtgcagtgtcctgcaggggttgccatggtgagaact
acggaactcaagcccacggaccaagaagagaagttggagtggactgagggagaagtgaca
ttaatctacagcgaggaggcgggcactcagatcatccagcaccaggattcactgacagaa
tactgctccatatcaaccaactgctccctggagccactggggtcagactgttccagcact
tcagccctcgcctcattagccagccacagcagtgcgccactgccagcagaggaccaagac
cagcaggcatcctccaaccccacaccgacgcagctgcaagcattcactgtgctaccagtg
aacggaactctatggatccccaggcgtggaggtgatgtgatggttattgaaatgcagtca
catgacgatcagctgagggggcgtgtcatcgctgtcctcagtccaccaggatgttcatct
ttggggaacctggagaaggcagagctagtggcaaaggacacagttgtatgtggctttcat
aaggaaaacatggagtggtgcctgtgtgtctggaggggctggggctgccgcgagctagaa
gtcttctaccagtcttatgaggagctcagtcgcttggagaccagtctgaggaaaagaagg
tag
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integrated database retrieval system
