Etheostoma cragini (Arkansas darter): 117945776
Help
Entry
117945776 CDS
T07493
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecra03400
]
117945776 (ascc3)
Enzymes [BR:
ecra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
117945776 (ascc3)
DNA repair and recombination proteins [BR:
ecra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
117945776 (ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
nSTAND3
AAA_19
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
117945776
NCBI-ProteinID:
XP_034729365
LinkDB
All DBs
Position
6:6791322..6969835
Genome browser
AA seq
2205 aa
AA seq
DB search
MSPPRLTGALRSFSNVSKKEDFTEHLHDLKTKRLKRRELFAREGLTWQKIVHFCSEDQDK
AKRQAANQELKSLLLAAKEIVGADQGQAAFESAAVFLFETFHNKDHVGTEETRAIKQMFG
PFPSSAAEASCVCVARLVAPLGESRVENFIQTLCSRHNPQRGSTFGRNIVFSYDCYTLDP
LEDLPCSGIDEEDVSLDFINFLNNQQSGRKGVREGEVSSSGRSLSSGDGAILRTEVEKYL
NGGNMISSSPEELCTSLFEKLASRRSDDELQNELFELLGPEGLEMISTLLQRRAAIVDSL
LTIPPDRTGYPPDVSRKASGEVTKPTYGCQVTIQSEQEKQMMKLYRREEKRERKRGKGID
DSDSSDAALTFDPREMRIQREQALLTARREPVLSRERVYERIRYPNVYDSYAEATKMPAF
VGGAKMMLPEGIRRENTKMYEEVEIPPNDPMSIGFEEKPVYISELDEIAQLVFKGMKRLN
RIQSIVFETAYNTNENLLICAPTGAGKTNIAMLTVLHEIHQHLQPGGVIKKDEFKIVYVA
PMKALAAEMTNYFSKRLEPLGITVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRKSVG
DVALSQIVRLLILDEVHLLHEDRGPVLESLVARTIRQVESTQSMIRILGLSATLPNYLDV
AAFLHVNPYIGLFFFDSRFRPVPLGQTFVGIKSTNKIQQLHDMEEVCYNKVLEQVKAGHQ
VMVFVHARNATVRTAMGLIEMAKNHGEICFFQPDQGPDYGQCEKQIQRSRNKQMKEMYPE
GFGIHHAGMLRSDRSLMESMFSKGHLKVLVCTATLAWGVNLPAHAVIIKGTQIYDAKRGT
LVDLGILDVMQIFGRAGRPQFDKYGEGTIITTHEKLSHYLTLLTQQNPIESQFLDSLADN
LNAEIALGTVTNVEEAVKWLSYTYLYVRMRANPLAYGINHKAFQMDPSLELYRKELVVES
GRKLDKAKMIRFEERTGYYASTDMGRTASHFYIKYNTIETFNELFNSQRTEADILSIVSK
AEEFDQLKVRDEEMEELDQLLSNYCELPAAGGVENGYGKINVLLQTYISRGEVDSFSLIS
DLSYVAQNAARIVRALFEIALRKRWPAMTYRLLTLCKVIDKRLWPFAHPLRQFPNLSHVV
LNRLEERKLTVDKLKEMRKDEIGHMLHHVNIGLTVKQCVHQIPSITMEANIQPITRTVLR
VRLIVTPDFRWNDQVHGSVGEPWWLWVEDPINDHIYHSEYLLLQKKQVVTEEPQHIVFTI
PIFEPLPSQYYIKAVSDRWLGAEAVCIINFQNLILPERHPPHTELLDLQPLPVTALGNRE
YESLYKFTHFNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAEMAMFRVFNKYPTSKVVY
IAPLKALVRERIEDWKIRIEEKLGKKVVELTGDVTPDMRAIAQADLIVTTPEKWDGVSRS
WQNRSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTSRSVRVVGLSTALANAR
DLADWLGIGQVGLFNFRPSVRPVPLEVHIHGFPGQHYCPRMASMNKPTFQAIRSHSPAKP
VLIFVSSRRQTRLTALDLIAFLATEDNPKQWLHQDEREIESIIATVRDSNLKLTLAFGIG
MHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVVVKGTEYYDGKSRRYVD
YPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLTVLSDHLNA
EISAGTVSSKQDAMDYITWTYFFRRLVMNPSYYSLEDISHESINKYLSNLVERSLRDLEC
SYCIELKEDDQTIEPLTYGRISSYYYLKHQTIRTFKERLRAELPIHELLSVLSDAEEYAE
LPVRHNEDQLNSQLAQQLPLQVNPHSYDSAHTKTHLLLQAHFSHAQLPCSDYNTDTKTVL
DNSIRICQAMLDVAANEGWLVTAISICNLVQMIVQGRWLHDSSLLTLPHIEQQDLYLFRK
WANKKERPIEGLPELIAACNGKESVFAAIVGQEFQSSQVAQTWSFLSHLPVLEVEMSVKG
WWEESQEETERPLPAAGANPKAENRWLDVHADQEYVLQVSLRRINLGQQRRKQDSKAQAP
RFPKTKDEGWFLVLGEVDRKELLAVKRVAYVRHRTAVSVAFYTPEKTGKCIYTLYLMSDS
YLGLDQQYDIHLNVTPASISAQVNSEVSDSVTQLSRKGNTDRKSR
NT seq
6618 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctccacggctcaccggtgctctgcgctccttctccaatgtcagcaagaaggag
gactttactgagcacctccatgatctgaagaccaaacgactgaagagacgggagctgttt
gccagagagggtctgacgtggcaaaagattgtccatttctgctctgaggatcaggacaaa
gccaaacggcaagctgcaaatcaggaactgaagagcctccttctggcagccaaagaaatt
gtgggtgcggatcagggtcaggcagcctttgaaagtgctgctgtctttctgtttgagacc
ttccacaacaaagaccatgtgggcacagaggagactcgggccattaaacagatgttcggc
ccctttccatcatctgctgctgaagcctcctgtgtctgtgtggctcggctggtggctcca
ctcggagaatcccgagtcgagaactttatccagaccctgtgctcccgtcacaaccctcaa
cgcggctctactttcggacgcaacattgtcttctcgtatgactgctacacactggaccca
ctggaggacctgccgtgctcgggcattgatgaggaggatgtgagtctggacttcatcaac
ttcctcaacaaccagcagagtgggaggaagggtgtccgtgagggagaggtgtccagctca
gggagatctctgagctctggggatggagccatccttagaacagaagttgagaagtatctg
aatggaggcaacatgatctcatcaagcccagaggaactgtgcacctccctgtttgaaaag
ctggcctcccgcaggagtgatgatgagctgcagaatgagctgtttgagctgctgggccca
gaggggctggagatgatctccaccctcctccagcgaagggcggccatcgttgactccctc
ctcaccatcccacctgacaggactggctacccaccagacgtgagccgaaaagccagtggc
gaagtgacaaagcccacctatgggtgccaggtgaccatccagtcagagcaggagaaacag
atgatgaagttgtaccgcagggaggagaagagagagaggaagagaggcaaaggaatagat
gacagcgactcctcagatgctgccttgaccttcgaccccagagagatgagaatccagagg
gagcaggccctcctgactgcacggcgggaacctgtcctgagcagagagagagtgtatgaa
cgtattcgatatccaaatgtctatgacagctacgcagaggccacaaagatgcctgcgttt
gttggaggagccaagatgatgctacctgagggaatccgcagagagaacactaagatgtat
gaagaggtggagatcccacccaacgaccccatgtctatcggttttgaagagaagcccgtc
tacatctctgaactagatgagatcgcccagctggtgttcaaggggatgaagcgtcttaac
aggatccagtccatcgtgttcgagacggcctacaacaccaacgagaacctgctcatctgc
gctccgactggcgccggcaagaccaacatcgccatgctgaccgtgctccacgagatccac
cagcacctgcagcccgggggtgtcatcaagaaggacgaattcaagatcgtatatgtggct
cctatgaaggccttggcagctgagatgactaattacttcagtaagcgactggagccactg
ggcatcactgtgaaagaactcactggagatatgcagctaaccaaaggagaaatcctacgg
acacagatgttggtgacgactccagagaagtgggatgttgtgaccaggaagagtgttgga
gatgtggctctctcccagattgtgcgtcttctaatcttggatgaagttcaccttctccat
gaagaccgaggaccagtgctggagagcctggtggccaggaccatcagacaggtggaatcc
acccagagtatgatccggatcctgggactatcagccaccctgcccaactatctagatgtg
gccgccttcctacatgtcaacccctacatcggcctctttttctttgacagtcgcttcaga
cctgtgccccttggacagacctttgttggcatcaaatccactaacaagatccagcagctt
catgacatggaggaggtttgctacaacaaagttctggagcaggttaaagccgggcatcag
gtgatggtgtttgtccacgctcgtaatgccacagtgaggacggccatggggctgatcgag
atggcaaagaaccatggagaaatatgcttcttccaaccagaccagggtccagactatggc
cagtgtgagaaacagatccagcgctccaggaacaagcagatgaaggagatgtatcctgaa
ggctttgggatccatcatgctggcatgttgcggtctgaccgcagcttgatggagagcatg
ttctccaaaggccacctcaaggtgctggtctgtactgccaccctggcctggggagtgaac
ctgccggcccatgcagttatcatcaagggtactcaaatctacgacgccaagcgtggcacc
ctggtggacctgggcatcctggacgtcatgcagatttttgggcgcgccggtcgtccccag
tttgacaagtacggcgagggcaccatcatcaccacccatgagaaactgagccactacttg
accctgctgacccagcagaaccccatcgagagccagttcttggacagcctggctgacaat
ctcaacgccgagattgctctggggacggtcaccaacgtggaggaggcggtgaagtggctc
agttatacctacctgtatgttcgcatgagggccaacccactggcatatggcatcaaccac
aaggcttttcagatggatccctccttagagctgtacaggaaggagcttgtggtggagtca
ggcaggaagctggacaaagccaaaatgatccgctttgaggagcgcactggctactatgcc
tccactgacatgggccggaccgccagccacttctacatcaaatacaacaccatagagacc
ttcaatgaacttttcaactctcagcgaacagaagctgacatcctcagtatcgtgtccaag
gctgaagagtttgaccagcttaaggttcgtgatgaggagatggaggagctggatcagctg
ctgagtaactactgtgagctgccggccgccggcggggtggagaatggctacggcaaaatc
aacgttctgcttcagacgtacatcagccgaggagaggtggacagcttctctctcatctca
gacctgtcgtatgtagcacagaatgctgctcggatcgtcagggctttgttcgagattgct
ttgaggaagcggtggccggctatgacctaccgactgctcaccctctgtaaggtgatcgat
aagcggctgtggccctttgcccaccctctccgtcagttccccaacctaagccacgttgtg
ctgaaccgcttggaggagaggaagctcactgtggacaaactgaaggaaatgaggaaggat
gagatcggtcacatgctgcaccatgtcaacatcgggcttacagtcaaacagtgtgtccac
cagatcccctccatcacaatggaggccaacattcagccaatcacacgcaccgtcctacgt
gttcggctcatcgttacacctgactttcgctggaacgatcaggtccatggttcagtgggt
gagccatggtggttatgggttgaggatcccatcaatgatcacatctaccactctgagtac
ttactcctacagaagaaacaggtggtaacagaagagccccagcacatagtgttcaccatc
cccatctttgagccgttgccctcccagtactacatcaaggcagtgtctgaccgctggctc
ggggccgaggccgtctgcatcattaactttcagaacctcatcttgcctgagagacatccc
ccacacactgagcttctggacctgcagccattgccggtgacggcgctgggtaaccgcgag
tatgagagcctgtacaagttcactcacttcaaccccatccagactcagatcttccacacg
ctgtatcacaccgacactaacgtcctgctgggggcgccaacaggctctggaaaaaccatc
gccgcagagatggccatgttccgggtcttcaacaagtatccaacctcaaaggtggtgtat
atcgcccccctgaaagccttggtcagagagaggattgaggactggaagatcaggattgag
gagaaactggggaagaaagtggtggaactgacgggtgacgtgactccagacatgagagct
atagcacaggcggacctcatcgtcaccacacctgagaagtgggacggagtgagcagaagc
tggcagaacagaagctacgttcagaaagtagcaattctgatcatcgatgagatccacctg
ctgggagaggacagaggtccagtgttggaggtcattgtgtccaggaccaacttcatctcc
tctcatacttctagaagtgtccgagtcgtcggtctgtccacagctctggccaatgctcga
gaccttgccgactggctgggaatcggacaggtgggtttgtttaactttcgtccttctgtt
cgccctgtaccgctggaagttcacatccatggtttcccagggcaacactactgcccccgc
atggccagcatgaacaagcctaccttccaagcgatacgtagccactccccagccaagcca
gtgctgatttttgtctcatcgcgacgacaaactcgtctgaccgccctggacctcatcgcc
ttcctggccacagaggacaaccccaaacagtggctgcaccaggacgagagagagatagag
tctatcatcgccacagtaagagattccaacctgaagctaacgttggcctttgggatcggc
atgcatcacgcaggcctgcatgagagagacagaaagactgtggaggagctgtttgtgaac
tgtaagatccaggttttgattgccaccagtactctggcatggggcgtgaacttcccggct
cacttggtggtcgttaagggaactgaatactatgatggcaaatccaggcgctacgtggac
taccccattacagatgttctgcagatgatggggcgagcaggtcggcctcagtttgatgac
cagggcaaagcggttatcctcgttcatgacatcaaaaaggatttctacaagaagttcctc
tatgagcctttccctgttgagtccagcctactcactgtgctgtccgaccatctgaatgct
gagatttctgcaggaaccgtctcgtccaaacaggatgcgatggactacatcacctggacg
tacttcttcaggcggctggtgatgaatcccagttattacagcctagaagacatcagccac
gagtccattaacaaatacctgtccaacctggtggagagaagcctgcgggacctggagtgc
tcttactgcatagagctaaaagaggatgatcagaccattgagccactgacttatggtcgc
atctcctcctattactacttgaagcatcagaccatccgaacgtttaaagagcgactgagg
gctgagctgcccatccatgagctgctctccgttctgtcggatgcagaggagtatgccgag
ctgcccgtcagacacaatgaggaccagctgaacagccagctggctcagcagctccccctg
caggttaacccccactcctatgacagcgcccacaccaagacccacctgctgctgcaggcc
cacttcagccacgcccagctgccgtgcagcgactacaacaccgataccaagaccgtactg
gacaactccatccgaatttgtcaggccatgctggatgttgctgccaatgaaggctggctc
gttacggccatcagtatctgcaacctggtgcaaatgatcgtccagggccgatggctgcac
gactcgtcattactgacgctgccccatatagaacaacaagacctctatcttttcagaaaa
tgggcaaataagaaggagaggccaatcgaaggacttcctgagctgattgctgcctgcaat
ggaaaggaaagtgttttcgctgctattgttggacaagagtttcaatcaagtcaggttgca
cagacatggtccttcctgagtcatctcccggtgctggaagtggagatgagtgtgaagggc
tggtgggaggagagccaggaggagacagagcggccccttcctgcagcaggagccaacccc
aaggcggagaaccgctggctggatgtccacgctgaccaggagtacgtcctgcaggtgtca
ctgagacgcatcaacctaggccagcagaggaggaagcaggacagtaaggcccaagcaccg
aggttccccaagaccaaggatgaaggctggttcctggtcttgggagaggtggatcgcaag
gagctgctggccgtcaaacgagtcgcatatgtgcgccaccgcaccgctgtgtctgtggcc
ttctacacaccggagaagactgggaagtgcatctacacactgtacctgatgagtgacagc
tatttgggtctggaccagcagtacgacatccacctgaatgtaacacccgccagcatctct
gctcaggtcaactccgaggtgtccgactcagtgactcagctgtcccgcaaggggaacacc
gaccgaaaaagtcgatga
DBGET
integrated database retrieval system
