Etheostoma cragini (Arkansas darter): 117945801
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Entry
117945801 CDS
T07493
Symbol
sntb1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117945801 (sntb1)
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PDZ
PH_17
PH
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
117945801
NCBI-ProteinID:
XP_034729393
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Position
6:12857363..12895216
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AA seq
509 aa
AA seq
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MAVVIATGVSGASGVQKSGFVEVLVREQWHKVLVILNEEALTLSCEESCVNDNVNDNVNS
NGVTNGSYFDNNNTNSNNGPQTVRTAFTDLPERVPEAIANRKRCVKVTKQEIGGLGISIK
GGKENKMPILISKIFQGLAADQTQALYVGDAILSVNGVNLRDATHDEAVQALKRAGKEVT
LEVKYMREATPYVKKGSPVSEIGWETPPPDSEVKAFLTFRIFSSRQLELHSPDARHTVVL
RCSDQPSALSWFTAMHTVTSTLAQRALAEVIQNTARTGVAGSKEIRHLGWLAGKTESEKQ
CWKPVLVVLTEKDLLLYETLPRGKEAWQSPEHTYPLLATRLVHSGPDRGSPHSGTELFFA
TRTGTRLGIETHLFRAETTKDLSLWTRHIVNGCHASAEMIKEVTTSCLYQSQECRLVIHY
EQGFSVLADPKLGDGEERGAHTPTRPRVLLSYPYEKLKLSSDDGVRMLVLDFGGKEGEIQ
LDLHSCPKPIVFILHSFLSAKISRLGLVA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtaatagcgactggagtttcaggtgcctccggagtgcaaaaaagtggattt
gttgaggttttggtgcgggagcaatggcacaaagttttggtcatcttgaacgaggaagcg
cttacgttaagttgcgaggaaagctgcgttaacgacaacgtgaacgacaatgtcaactcc
aacggcgttaccaacggatcttacttcgacaacaataacaccaactccaacaacggcccc
caaactgtgcgcaccgcgttcaccgacctcccggagcgagtgcccgaggcgatcgccaac
agaaagcggtgcgttaaggtgaccaagcaggagatcggggggcttgggattagcatcaaa
ggtgggaaggagaataaaatgcctatcctcatcagtaagatattccaggggctcgcagcg
gaccagacccaggctctgtatgtcggggacgccatcctgtcagtgaacggcgtgaacctg
cgggacgcgacccacgacgaggctgtgcaggcgctaaaacgggccgggaaagaggtgact
ctagaagtgaagtacatgcgcgaggccacaccgtacgtgaaaaagggctcccctgtgtct
gaaatcggctgggaaacaccccctcctgattcagaggttaaggcttttttaacttttcga
atcttctcctccagacaactggagttgcactcccctgatgctaggcacaccgtggtgctg
cgttgctcagaccaaccatctgccctgtcctggttcactgccatgcacactgtcacatcc
acactggcacagcgggcgctggcagaggttatccagaacacagccaggactggggtagct
ggcagcaaagaaatacgacacctgggatggctggctgggaagacagagagtgagaagcag
tgctggaagccggtgctggtggtgttgacggagaaagatcttctgctgtatgagacttta
ccacgaggcaaggaggcctggcagagccctgaacacacctatccactcttagcaacgcgt
ctggtacactctggccctgaccgggggtcgcctcattctggtacagagctgttctttgcc
actcggactggcacacgactcggcatcgagactcacctgttccgggctgagaccaccaag
gatctgtccctctggaccagacacatagtcaacggatgtcatgcctcagctgagatgatc
aaagaagtcacgacaagttgtctttaccagagtcaagagtgccggctggtgattcactac
gaacagggcttctctgtgctggctgaccccaaattgggagacggggaagagaggggcgct
cacacacccaccaggccccgagtgctcctctcctacccctatgaaaaactaaagttgtcc
tcagatgacggagtccgcatgcttgtcctagacttcggagggaaggagggggagattcaa
ctggacctccactcttgtcctaagccgatcgtcttcatcctccactccttcctctctgct
aagatctcccgcctgggtctggtggcctga
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