Etheostoma cragini (Arkansas darter): 117945833
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Entry
117945833 CDS
T07493
Symbol
cspg5a
Name
(RefSeq) chondroitin sulfate proteoglycan 5 isoform X1
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ecra00535
]
117945833 (cspg5a)
Proteoglycans [BR:
ecra00535
]
Cell surface proteoglycans
Others
117945833 (cspg5a)
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GFIT
Motif
Pfam:
Neural_ProG_Cyt
TMEM213
Motif
Other DBs
NCBI-GeneID:
117945833
NCBI-ProteinID:
XP_034729436
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Position
6:25998861..26048490
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AA seq
583 aa
AA seq
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MQGKEASFRTGCWRRTLLSCVLALSLIPLAVHGNAVGTNATEPDSAANVTSLLSEEDGPV
KVNEAVLAVTGTTSLASPDTVTPRAGRIPRAGEEDEQSSGMFPETLVPALEEVAAPPQIS
PDSAETEHLLPSNPRGQDVVESEEEEEEDEARLPNTDPPWIHAKDTAVFDLDHLFTTTTA
QPSAPNNPTNPTNPSNPDVLHVDFFDPSSRGRGLDLAPPSPSSLAHELQGGDATSWAMPD
NYDYLTPYEDGVSPTADEYTYSTTTDTYESDEDLRLAGGSPARSKPRVPASGPFIPGAPR
PGGRAPVPNVPGVAPPMASPVDGSDGMGGCRVGYQMVNGSCRSPCDMLPNYCFNGGQCYL
LEGMGVFCRCNVQDYIWHKGARCESVVTEFQVMCLAVGASALVVLLLFMIIVCFAKKLHV
LKTENKKLRKRSSKYRPSSEQHNDNFSLSTIAEGSHPNVRKLCDTPPNVPHARALAYYDN
IICQKTMSRYTWECKTKEESDCEVRPNPEMSESPAPVSHPPKQLSHGYCGPVNHPLNSQW
INLSLIPCHQKGKNQKYIVSQEDMTRDRSTHIMLPVRSEDFTH
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggaaggaggcgagctttcgcacgggatgctggagacgaacgctgctgtcgtgc
gtcttggcactctccttgatcccgctggctgtccacgggaatgctgttgggaccaatgcc
actgagccggacagcgcggccaatgttacctcccttctcagcgaggaggatgggcctgtt
aaggtcaacgaggccgtcctcgcagtaaccgggacgaccagcttggccagtccagacact
gtgaccccgagggcaggccggatcccccgcgccggcgaggaggacgagcagagcagcggc
atgtttcctgaaacattggtccctgctttggaagaagtggcagccccgccccagatcagc
cctgattctgctgagacagagcacctgctgcctagcaacccacgcggacaggacgtcgtg
gaaagcgaggaggaggaggaggaggatgaggcacgtctgccaaacaccgacccgccttgg
atccacgccaaggacacagccgtgtttgacctggatcacctcttcaccaccaccaccgcc
cagccctcggcccccaacaacccaaccaaccccaccaatccctccaaccctgacgtcctc
catgtcgacttcttcgacccctcctctcgtggacgcggcctcgacctggcaccgccgtct
ccatcatcactggcccatgagctgcagggaggcgacgcgacctcctgggcgatgccggac
aactacgactacctcaccccctatgaggatggcgtgtcccccaccgctgatgagtacacc
tacagcaccacgaccgacacctatgagagcgatgaagacctccgcctcgccggtgggtct
ccagctcgctccaagcccagagtgccagcgtctggccccttcatccccggggccccacgt
cctggagggagagctccagtaccaaatgtccctggggtggctcctccaatggcctcacca
gtggacgggtcagatggaatgggtggatgccgtgtgggctaccagatggtgaacggaagt
tgccgctcgccctgcgacatgctgccaaactactgtttcaacggtggacagtgttacctg
ctggagggcatgggagtcttctgcagatgtaacgtccaggattacatctggcacaagggt
gctcgctgcgagtcggtggtgaccgagttccaggtgatgtgtctggccgtgggcgcctcg
gctctggtggtcctgctgctcttcatgatcatcgtctgcttcgccaagaagctccatgtg
ctcaagacggagaacaagaagctgcgcaagcgcagcagtaagtaccggccttcatcggag
cagcacaatgataatttctcgctgtctaccatcgctgagggctcccacccaaatgtaagg
aaactgtgcgacacccctcctaacgtccctcatgcccgtgcattggcttactatgataac
attatctgtcagaaaaccatgagcagatacacctgggagtgtaagaccaaagaggagtcc
gactgtgaggtaagaccaaatcccgaaatgtcagaaagtcccgcccccgtctctcaccct
cccaaacaactctctcatggttactgtggccctgtcaatcaccctctcaactctcagtgg
atcaatctgagtcttatcccctgccaccaaaaaggtaaaaaccaaaaatatatcgtcagt
caggaagacatgacaagggacagatccacacacatcatgttacctgttagaagtgaagac
tttactcattaa
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