Etheostoma cragini (Arkansas darter): 117945907
Help
Entry
117945907 CDS
T07493
Name
(RefSeq) DENN domain-containing protein 4B-like
KO
K20163
DENN domain-containing protein 4
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117945907
Membrane trafficking [BR:
ecra04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117945907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
uDENN
dDENN
DENN
PPR_2
PPR_3
PPR_long
PPR
DUF2464
Motif
Other DBs
NCBI-GeneID:
117945907
NCBI-ProteinID:
XP_034729533
LinkDB
All DBs
Position
6:28539548..28562638
Genome browser
AA seq
1215 aa
AA seq
DB search
MTEEKCPQLVDYFVVAGLDPAGAWKPLDEDGKTCNSSSSPSSSSSSSSSALSGRAVESVT
DLAVIARGLGEEVPEGFTCIEKTLGGHSAELSTGLINNPHLYLCYRRGRDKPPILDLGVL
YEGKEQLKQGWFVIETTPYSRSANLNSGGAPTAHRVFLTYRRALDSQGLHTLGVTDIALL
LPSKSEVAPHTFCRVDKNLNTGMWGPALYVCYKRAVAKANALVYKASLISRYPEEDLEAF
PLPESVPVFCLPMGVTVESWPLNTKYQLPVFSTFVLTSASGDKVYGAAIQFYESFSRDLL
SERQSVRLGLLSVVDRRPITNRSLQVKKSICVLSHWPFFTVFQKFLTFVYRYSISGPHVL
PLEKHISSFMHNVPFPSPQRPRILVQVHAPDSNRHHVVHMCVLHQVDADHVGGGVVQVEV
AGVDAHDEGHGRQQHVGHLQRTQRDLFSCLRSDDKKPLSWRSLPRKPGKTLFTTLTNLHR
TLEKICTPGQEEATLEFLLTDYDQIYRSQKQLELEIQEAFLRFMSCLLRGYRTFLLPITQ
APSDTTTDCSSLFNLQGFLKSRDRTQQKIYSQLTRTQMFTQFIEECSFVSDRHACLEFFD
ECVQKVDVEKPEDVRLIDLDETHSGEHTVFIMPPEEPQEADGSECPALYSYETFPTLRPE
LFDRPQDQLRVPAKGSAPSSPAPRRTKQEIKLAQKRAQKYSGVPDMWSKCLLGHCYGLWF
IYLPTFVRAETAKVRALHAAYDVLKHMENRKVVLPDEVCYRILMQLCGQYGQPVLAVRVL
LEMKKAGITPNTITYGYYNKAVLESKWPSTNQGGRLRWAKLRNVLLAVALFRQPIKHRQK
SGSVGSRGEALLDPDQKPRPHSTLIRQSSWSGLSESSSHESLTGSMAKSSSLNSMKTPTD
KVKLCRKTILRNTGTNGCGDTVSSKPPMGRRDTPTLPPAAPGGVLVRRSEVCLSTFYKEC
AESAESEPDCSCQAPETDRRSGTSRSGPTSDVALTSLSLAFSSVSATWAFRDCLCSETLR
PMPPPPPPGRRASTLAARRLDPRCLVGVSSCCSFPASPPRLGDETLFAERTNWNVEDEVE
SAVRPPGGQEASLRHQCNGLSEDSSSETSSYSENSRTTTALESPKEGSLSTAATETPRVT
SVTSVTPRTKAVECAWQRESSTEVSGPTLIQTKGLVGTPRPRPPPTVPYAAQRRRRGRGG
RRETRRPPRCLPLHK
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggagaaatgtccccagctggtggactactttgtagtggcaggactcgaccct
gcgggggcctggaagccactagacgaggatggcaaaacctgcaactcgtcctcgtccccg
tcctcctcctcctcctcctcttcctcggcgttgtcgggtcgagcggtggagtcggtgacg
gacctggcggtgatcgcccgggggctcggggaggaggtgcccgagggcttcacctgcatc
gagaagacgctggggggacactcggccgagctgagcaccggcctcatcaacaaccctcac
ctgtacctgtgctaccgccgggggcgggacaagccccctatactggacctgggggtcctg
tatgaggggaaggagcagctgaagcagggctggttcgtcatcgagaccacgccctacagc
cgctcggccaacctgaactccggcggcgcccccacggcccaccgggtcttcctgacgtac
cgccgggccctggactcgcagggtctccacacgctgggggtcaccgacatcgccctgctg
ctgcccagcaagtcagaggtcgccccccacaccttctgccgcgtggacaagaacctcaac
accggcatgtggggtcctgctctgtatgtgtgctataagagagcggtggccaaagccaac
gccctggtctacaaagccagtctgatcagccggtacccggaggaggacctggaggcgttt
cctcttccggagtcggtgccggtcttctgtctgccgatgggcgtcaccgtggagagctgg
cctctcaacaccaagtaccagctgcccgtcttctccaccttcgtcctcacctccgcctcc
ggggacaaggtgtacggagcagccatccagttctacgagtccttctcccgggacctgctg
tcggagcggcagagcgtgcggcttgggctgctcagcgtggtggaccggcggcccatcacc
aaccgcagcctgcaggtgaagaagagcatctgtgtcctctcccactggcccttcttcacc
gtcttccagaagttcctcaccttcgtgtaccgatactccatctccggaccccacgtcctg
ccgctcgagaaacacatctccagcttcatgcacaacgtcccgtttccttccccccagcgg
cctcgcatccttgttcaggtacacgccccagactcaaaccgtcaccatgtagtccacatg
tgtgtactccatcaggtcgacgcagaccacgtcggtgggggggtcgtacaggtcgaagta
gctggagtggacgcccacgatgaagggcatgggcgccagcagcacgtcggccatctgcag
aggacacagagggatctcttctcgtgtctcaggtctgacgacaagaagccgttgtcatgg
cgatcgttacccaggaagcccggcaagacgctgttcaccaccctcaccaacctccaccgg
acgctggagaagatttgcacccccggccaggaggaggcgacgctggagttcctgctgaca
gactacgaccagatctaccggagccagaagcagctggagctggagatccaggaggccttc
ctccgcttcatgagctgcctgctgcgcggctaccgcaccttcctgctacccatcacccag
gcgccgtcggacaccaccaccgactgcagctccctcttcaacctgcaggggttcctgaag
tctcgggaccgaacccagcagaagatctacagccagctgacccggacccagatgttcacc
cagttcatcgaggagtgctccttcgtcagcgaccggcacgcctgcctcgagttcttcgac
gagtgcgtccagaaggtggacgtggagaagccggaggacgtcaggctgatcgacctggac
gagactcacagcggcgagcacaccgtcttcatcatgccgcccgaagagccgcaggaggcc
gacggctccgagtgtcccgcgctctacagttatgaaaccttccccaccctgaggccggag
ctctttgaccggccccaggaccagctccgggtcccggcgaagggcagcgcccccagcagc
cccgccccccgccgcaccaaacaggagatcaagttggcccagaagcgagcccagaagtac
tcaggggtgccggacatgtggtccaagtgcctgctgggtcactgctacgggctctggttc
atctacctgcccaccttcgtccgggccgagaccgccaaggtgcgcgcgctgcacgcggcc
tacgatgtcctcaaacacatggagaaccgcaaggtggtgctgccggacgaggtgtgttac
aggatcctgatgcagctgtgcggtcagtacggtcagccggtcctcgccgttcgggtcctg
ctggagatgaagaaggcgggaatcacccccaacaccatcacctatggatactacaacaag
gcggtgctggagagcaagtggccgtccaccaatcagggaggacgtctccgctgggccaag
ctgaggaacgtcctattggccgtggctctgttcagacagccaatcaaacaccgtcagaag
agcggatcagtgggctcccgtggagaagcgctgttggaccccgatcagaagccccgccca
cactcaactctgattcgccagtccagttggagcggcctctcggagagctccagtcacgag
tctctgacgggctcgatggcgaagagcagcagtctgaacagcatgaagacgccgacagac
aaggtgaagctctgcaggaagaccatcctccgtaacacagggaccaacggctgcggagac
accgtctccagtaagcctccgatgggacgcagagacacccccaccctgcctccggcggcc
cctgggggggtcctggtccggcggagcgaggtctgcctctccaccttctacaaagagtgt
gccgagtcggccgagtcggagccggactgcagctgccaggcgccagagacagaccgcagg
tcgggtaccagcaggagcggaccgacctctgacgtggcgctgaccagcctctccttggct
ttcagcagcgtttcggccacctgggctttccgagactgcctctgctccgagacccttcgg
ccgatgcccccccctcctccgcccgggcgccgggcgtccacgctggcggctcgccgacta
gacccccggtgtctggtgggggtcagcagctgctgcagcttccctgccagtcctccgcgg
ctcggggacgagacgttgtttgcggagcgcaccaactggaacgtggaggatgaggtggag
agcgccgtgcggccccccggtggccaggaggcctccctgcgacaccagtgtaacggtctg
agtgaagactcgagctccgagaccagcagctactcggagaacagcaggaccaccacggcc
ctggagtcaccgaaggagggttctctatccacagccgccacggagacaccccgcgtcacc
tccgtcacctccgtcacccctcggacgaaggcggtggagtgcgcgtggcagagggagtcg
agtacggaggtctccggtccgacacttatccagactaaggggttggttggaacgccacgg
ccgcgccccccccccaccgtcccgtatgcggcccagaggcgtcgacgcggacggggggga
cgccgggaaaccagacggccgccgcgctgccttcctttacataaataa
DBGET
integrated database retrieval system
