Etheostoma cragini (Arkansas darter): 117945979
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Entry
117945979 CDS
T07493
Symbol
lingo4b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117945979 (lingo4b)
Membrane trafficking [BR:
ecra04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
117945979 (lingo4b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_1
I-set
Ig_3
ig
Ig_2
LRR_9
V-set
LRRNT
LRR_Zer-1
C2-set_2
Ig_5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
117945979
NCBI-ProteinID:
XP_034729625
LinkDB
All DBs
Position
6:26764433..26782742
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AA seq
603 aa
AA seq
DB search
MLVESVVRWGAWSILLQFGLGVSAGSCPPRCVCRPEAKEVICSGKHLNSVPEGFSGDARR
LDLSHNKIKTVGRRQFSGLLQLQELDLSDNIISMIEVEAFQGLQNLRTLRIKNNRLKIIP
VGVFSGLSSLRCLDLSQNEILVFLDYTFKELVNLQTLDAEENDLVFISQRAFFGLQNLQE
LNLDRSNLTSVPTEALSQLQSLTRLRMLRLTISTLPNNAFRRLHRLRSLLIANWPSLDNV
ASNSLISLNLTSLVISSCNLSAVPYSAFRHLVYLRYLDLSYNPITVIQGNLLGDLLRLQE
FHLAGGSLLRIEPGAFRGLAYFRMLNVTSNQLTTLEESVFHSVGNLQVLRLDGNPLACDC
RLLWVVRRRLRLNFDGHQPSCLSPDAVRQREFRDFSEKELPRLFTCRPARIMDRRPQEAR
VEEGTTVTFSCKADGDPFPSITWISSHKHVVSPTGRIRVLLNGTLEVRYAQVQDSGTYQC
LAGNAAGNDSLTVGLYVKGLPRNRTIPFFSEEGWVEPSNSQAANSSAQTAKPYPFDAKTL
IIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHTATIDFVPRSSMGGGGDTGDGGRFTM
KLI
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgttagtggagtcagtcgtccgatggggggcttggagcattctgcttcagtttggactg
ggtgtatctgcaggaagctgtcctccacgctgtgtgtgtcgacctgaggcaaaagaagtg
atctgttccggcaaacatttgaactcagtgccagaaggcttttctggtgatgccagacgt
ttggatttatcccacaataagattaagactgttgggcgccgccagttctctggtctcctg
caacttcaagagttggatctcagtgataacataatctccatgattgaggtggaggctttc
cagggcctacagaatctcaggacactacggattaagaataatcgactcaagattatccca
gttggggtgttttctggcctttcaagtctgcgctgtctggatttaagccagaatgagata
ctggtcttcctggactacaccttcaaagaattagtgaacctgcaaacactggacgccgaa
gagaatgacttggtcttcatctcccagcgggctttctttggtctgcagaatctgcaggag
ctcaatttagatcgcagcaacctgacctcggttcctacagaggcattgtcccaacttcag
agcctgacccgtcttcgcatgctacgcctcaccatttctacactccccaacaatgctttc
cgacggctacaccgtcttcgtagcctcctgattgctaactggccatcattggacaatgtg
gctagcaacagcctgatcagtcttaatctgacctcacttgtcatcagcagctgcaaccta
agtgctgttccttactcagcatttcgtcatctggtgtatcttcgctacctggacttgtcc
tataaccccatcactgttatccaaggtaatctgctaggtgacctcctgagactccaagag
ttccatctagcaggggggagcctgctcagaatagagccaggggcctttagaggactggcc
tacttccgcatgctcaatgtgacctccaatcagctcactactttggaggagagcgttttc
cactctgtggggaaccttcaggttttgcggttggacgggaatcccctagcatgtgactgc
cggcttctctgggtggtccgtcgtcgattgcgcttgaactttgatggacatcagccctct
tgtttgtctcctgatgcagtgagacagcgtgaattcagagacttctccgaaaaggagctc
ccgagactcttcacctgccgccctgcccgtataatggaccgcaggccgcaggaggcgaga
gtagaggagggcacaacagttaccttctcctgtaaggctgatggggatcctttcccctct
atcacctggatctcatcccataagcatgtggtttctccaacaggacgaatccgagttttg
ctcaatgggactctagaagtgcgttatgcccaagttcaggacagtggcacatatcagtgc
ctggcgggtaatgcagccggcaatgacagcctgactgtcggtctgtacgtgaaggggctc
cctcgtaaccgaaccatccccttcttctcagaggagggctgggtagagccttcaaactcc
caagctgccaactcctcagctcaaacggccaaaccgtacccgtttgacgcaaagaccctg
atcatcgccaccaccatgggcttcctgtctttcctcagctcagtggccatctgctttgtc
ttcatgttcttctggagccagagcaaaggtcagatcaagcacacagcaacaattgacttt
gttccgcggtcttccatgggtggtggaggggacacaggtgacggtggcaggttcaccatg
aaacttatttaa
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