Etheostoma cragini (Arkansas darter): 117946028
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Entry
117946028 CDS
T07493
Symbol
sema6e
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E isoform X1
KO
K06842
semaphorin 6
Organism
ecra
Etheostoma cragini (Arkansas darter)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
117946028
NCBI-ProteinID:
XP_034729712
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Position
6:complement(26195609..26346467)
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AA seq
1085 aa
AA seq
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MRLTPGSPQPVLPAILALTLAAFLPQLSSGATPFPQDLEPISIVGRESSYLYPSFQGLMS
DNDTVRLGLDFQRMLRINRMLYIAARDHVFAINLATSSEQIIPQQKLTWKTKDVEKCTVR
GKNSDECYNYIKVLVPRNDETLFACGTNAFNPACRNYKMSSLEQEGEEVVGQARCPFESR
QSNVGLFAGGYFYSATMTDFLASDAVIYRSLGESSLVLRTVKYDSKWLREPHFLHAIEYG
NYVYFFFSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDS
FFYFDVLQSLTNVLQVNHRPAVLGVFTTQANSITGSAVCAFYMDDIEKAFSGKFKEQRNS
ETAWTPVPEEQVPKPRPGCCAGEGSAAAYKSSTNFPDETLTFIKSYPLMDESVPSVNNRP
YFTRTTSRFKLTQIAVDTSAGPYKNYTMVFLGSDNGHVLKILASTEGANASFSTQLLEDI
DVYNPNKCNVRGEDRRVLGLELDRDHHALFVAFSGCVIRVPLSRCSDYSTCKKSCLSSRD
PYCIWLKSGSCATVSPGFKGGFEQDVENGYHQHADTCHDVLATTRKQNPALDSAYGKTTP
TSASTTYHGAAFPKEAGDPERGTGPDGPPPVGEQGSPDSEPISVEMEGVRRPPELEKTNH
SVHYTLLIACVLVAFVLGAFLSGFLVSCYCNHTGHKTKKLSKDPEAPIPHALSLRSLAKL
NGLLDSQSKDDKMEVSSPKIYNSFFASSKEHHPPRRNGHHAMTMGDLVHHQHHLHHSSEL
SGLPTPDSTPELPIKSMKAFKNQWEKNQNCNNAKEAKSHNTGSRPSSALLHQQVFPYSHG
LSNGQPLVGHLHPEERKIPNVERVLSQQPYPGYSQKVMEVTSLDELLKHIHEASCSKNSQ
LMSPSGLMACAGGGQLAFPNRIQPQIPETESATYYSSSTLPRDSLTRRMDVPPEIPPHHQ
STLERRHSSQRHSLIAAATKMPNGGGGGGGMIPRQHSFSQRNGGPHQPPPLLARMNSTGS
ACEVHYPLIPNGYLTRQHSYNGEQQEVQHRAAIVRRASSLKPDVPPKPLFIPATSPVNQQ
GKFNY
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgacgcctggctcgcctcaacccgtcctgccggccatcctggctctcacctta
gccgccttcttacctcagctgtcctcaggagccacgccgttcccccaagacctggaacca
atcagcatcgtgggcagagaatcctcctacctctatcccagcttccagggactcatgtcg
gacaatgacaccgtccgcctgggcttggacttccagaggatgctaaggatcaaccgcatg
ctctacattgctgcccgggatcatgtgtttgccatcaatctcgccacttcatctgagcag
ataatcccacagcagaaactgacttggaagacgaaggatgtggagaagtgcactgtgaga
ggcaaaaacagcgacgaatgttacaactatattaaagtgctggtgccacgtaatgacgag
acgcttttcgcctgcggcaccaacgccttcaaccccgcctgccgtaactataagatgtcc
tcgctggagcaggaaggggaggaggtggtgggacaggctcgatgcccctttgagtcccgc
cagtccaacgtcggcctttttgcaggtggttatttctactcggccaccatgacggacttc
ctggcgagcgatgccgtgatttacagaagtctgggagaaagtagccttgttctgcgcacc
gtcaagtatgactccaaatggctgcgagagccccatttcctccatgctattgagtatggg
aactatgtgtacttcttcttcagcgagattgcagtggagtacaccactcttggcaaggtg
gttttctccagagtcgcacgtgtttgtaagaatgacaatggtggttcgccaagggtgctg
gaacgttactggacttcgttcctcaaagcgcggttgaactgctccgttccgggcgactcc
tttttctactttgatgtcctgcagtcgctgacaaacgtgttgcaggtcaaccaccggccg
gccgtgctcggcgtcttcaccacacaggcaaacagcatcaccggctcagcggtctgtgcg
ttctacatggacgacatagagaaggccttcagtggcaaattcaaagagcagaggaacagt
gagacagcgtggacacctgttccggaggaacaagtccccaaaccaagaccgggatgctgt
gccggggagggctcagcggctgcctacaagtcttccaccaacttccccgacgaaaccctg
actttcatcaagtcgtacccgctcatggacgagtcagtcccatcggtcaacaacaggccc
tacttcacccggaccaccagcagattcaagttgacccagatagcagtggacacgtctgct
gggccgtataagaactacaccatggtttttctgggctcagacaacggccatgtgctgaag
atcctggccagcaccgagggagccaacgcatccttcagcacccaactcctggaggacatc
gacgtctacaaccctaacaaatgcaacgtgcgtggagaggaccggagggtgctgggtctg
gagttggatcgggatcatcatgcgttgtttgtggcattctccggctgtgtgatccgagtg
ccgctgagccgctgctccgactacagcacctgcaagaaaagctgtctgtcttcacgggac
ccttactgcatttggctcaaatctggcagctgtgccactgtctcaccgggcttcaaaggc
ggctttgaacaggatgtggagaacggttaccatcagcatgctgatacttgccacgatgtc
ctggcaaccactcgcaagcaaaacccggctctggattcagcgtatgggaagaccacaccc
acaagcgccagcacaacctatcatggggcggcattcccaaaggaggcaggtgaccctgaa
agaggtacaggtcctgatggccctccccctgtgggggaacaagggtcacctgactcggag
ccaatcagtgtggagatggagggtgttaggcgaccaccagagctggagaagaccaatcac
agtgtccattatactttgctgattgcttgtgtattggtggcctttgtccttggcgccttc
ctatctggcttccttgtctcctgctactgtaaccacaccggccacaagactaagaagttg
tcgaaagatcccgaggcccccatcccgcacgccctgtccctccgcagcttggccaagctc
aatggcctcctggacagccagagcaaagatgacaagatggaagtgtcatctccaaagatc
tacaactccttctttgccagcagcaaggagcatcacccaccaaggagaaacggccatcac
gcaatgacaatgggagacctggtccaccaccaacaccacctccaccattcctcagagctt
tccgggctgccaacaccagactcaaccccagaactgccgatcaagagcatgaaagccttc
aagaaccagtgggagaaaaatcagaattgcaacaatgccaaggaagcaaagtcccacaac
actggctccaggcccagctcagccctgcttcaccagcaggtgttcccatactcccatggc
ttgtccaatgggcagccattagttggtcacctccatccagaagaacgcaaaatccccaat
gttgaacgtgtgctatctcagcaaccttaccctggttactcccagaaggtgatggaggtt
acctcactggatgagctcctgaagcacatccatgaggcaagctgcagcaagaactcccag
ttaatgagcccatcgggtctgatggcctgcgctggtggaggtcagctagcattccccaac
cgcatccaacctcagattcctgaaacagaatcagccacctactacagctcgtccacatta
ccacgagacagcctcacccgacgcatggatgttcctccggaaattcccccacaccaccag
tccaccctggagaggaggcactcctcccagaggcactcgctgattgctgcagccaccaag
atgcccaacggtggcgggggaggaggaggaatgatacctcgacagcacagcttcagccaa
cgaaatggtggtcctcaccagccgcctcccctcctggcacggatgaactcgactggcagc
gcctgcgaggttcactaccccctcatccccaatggttacctgacacgccagcacagctac
aacggagagcagcaggaggtccaacacagggccgctatcgtccgccgggcctcctctctc
aaacctgacgttccgcccaagcccctgttcatacctgccacgtcccccgtcaaccaacag
ggaaagttcaactattga
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