Etheostoma cragini (Arkansas darter): 117946083
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Entry
117946083 CDS
T07493
Symbol
myo5aa
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117946083 (myo5aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117946083 (myo5aa)
04131 Membrane trafficking [BR:
ecra04131
]
117946083 (myo5aa)
03029 Mitochondrial biogenesis [BR:
ecra03029
]
117946083 (myo5aa)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecra04812
]
117946083 (myo5aa)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117946083 (myo5aa)
mRNA cycle factors
P-body specific factors
117946083 (myo5aa)
Membrane trafficking [BR:
ecra04131
]
Others
Actin-binding proteins
Myosins
117946083 (myo5aa)
Mitochondrial biogenesis [BR:
ecra03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117946083 (myo5aa)
Cytoskeleton proteins [BR:
ecra04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117946083 (myo5aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_24
AAA_22
nSTAND3
DUF5382
Myosin_N
HTH_17
AAA_16
Motif
Other DBs
NCBI-GeneID:
117946083
NCBI-ProteinID:
XP_034729820
LinkDB
All DBs
Position
1:complement(25923577..25977840)
Genome browser
AA seq
1898 aa
AA seq
DB search
MNMNRELEYMFVQCARVWIPDAEEVWKSAELTKDFKNGDASLQLMLEDGTSIEHKLDPKT
KNLPYLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYETL
GIYGTDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYA
MRYFATVSGSTSEANVEQKVLASNPIMEAIGNAKTTRNDNSSRFGKYIEIGFDTRYRIIG
ANMRTYLLEKSRVVFQADEERNYHIFYQLCASSHLPEFKTLKLSSANDFLYTRQGRSPVI
QGVDDTKELSTTRNAFTLLGINESYQMGLFQVLAAILHLGNVEIKDKDSDSSLIPPNNRH
LTAFCELVGVTYQDMTQWLCHRKLKTATETYVKTLPCLQATNARDALAKHIYAKLFNWIV
EHVNKALITNIKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEE
YMKEQIPWTLIDFYDNQPCINLIEAKMGILDLLDEECKMPKGSDDSWAQKLYNTHLKTCS
LFEKPRMSNRAFIIQHFADKQVEYQCEGFLEKNKDTVNEDQINVLKASKKFDLLVELFQD
EEKATSPTGQVPGTGGRTRLSIKPDKGRDKSSKEHKKTVGCQFRNSLQMLMDTLNATTPH
YVRCIKPNDFKLAFSFDPKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQ
KDVLSDKKLTCRNVLEKLVEDQDKYQFGKTKIFFRAGQVAYLEKLRADKLRVACIRIQKT
IRCWLARKKYLRKRSAAITIQRFTRGYQARCLAKFMRRTQAATIIQKYQRMYMERKRYKQ
KQAAALVMQTILRAYMARQKYQGLVREHNAVIIQKRVRGWLARCWYKRCLVSLVYLQCCF
RRMKARRELKKLKIEARSVEHFKKLNKGMENKIMQLQRRIDEQSKDNRSINEKLVSLETS
STAERERMRGELSRLRGVEEDAKNKGNQVTSLLEQLEKLRKELSSTQKEKKTIEDWAQTY
RDEMEKMVSELKDQNCSLKKEKDDLNRLIQEQSQQMTEKMARAIVEKTQQLETDLNEERS
RYQNLLTEHRRLEEKYDDLKEAMVSSNVSKPGHRRTDSTHSSNESEYTYNSEYAELEEGS
RAAEDVTRGMDTSLTLKLQKRLTELEQEKQSLRNELENREDQFQRARARDDVEFKKARGA
ELEYESLKRQELESENKKLKHDLVEIRRSLLGNAATGAGAPGSPAYKVVLEQLNASCEEL
EVRKEEVLILRSQLVSQKEAMHHKDEKETMTEPSAYVEDVSKLKDAGELKQAYIGLKDTN
RSPRFMRKPLEVSDLLSRLRSAAPDFHKLNEDGELWLVNQGLKETIRLLEHQLQTQRRGY
DSEVESLRGELQNVKEENNRQQQLLAQNLQLPPEARIEASLQHEITRLTNENLELLAEDP
TASREARVIILRRMVDLMEQLEKQDRTIRKLKKQLKVYSKRIGEMGAGQTEGQTSPGQMV
DEPIHPVNIPRREKDFQGMLEYKKEDELKLVKNLILELKPRGVAVNLIPGLPAYILFMCL
RHADYVNDDQKVRTLLTSTINSIKKILKKRGDDFETVSFWLSNTCRFLHCLKQYSGDEAF
IKHNTQRQNEHILSNFDLAEYRQVISDLAIQIYQQLIKCMENILQPMIVSGMLEHETIQG
VSGVKPTGLRKRTSSIVDEGTYTLDSILRQLSAFHSTMCQHGTDPELIKQVVKQQFYIIG
AVTLNNLLLRKDMCSWSKGMQIRYNVSQLEEWLRDKGLMTCGAKETLEPLIQAAQLLQVK
KKTDEDAEAICSMCLALTTAQIVKVLNLYTPVNEFEERVSVAFIRTIQTRLRDRCESPQL
LMDTKMIYPVTFPFNPSSLALETIQIPSSLNLSFLTRV
NT seq
5697 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgaaccgggagttggagtatatgtttgtccaatgtgctcgggtttggataccc
gatgcagaggaggtgtggaagtcggctgagctgaccaaggacttcaaaaatggcgacgcc
tccctgcagctcatgttggaggatggaacgagcattgagcacaagctggaccccaagacg
aagaacctgccttacctgcgaaaccccgacatcttggtgggcgagaatgacctcacggca
ctcagctacctccacgagccagccgtgctgcacaacctcaaagtccgcttcatcgactcc
aagctcatctacacttactgcggaattgttctggtggccatcaacccgtatgagactctg
ggaatctacgggacagacatcatcaatgcctacagcggtcagaacatgggagacatggac
ccacatatcttcgctgtggcagaggaggcttacaaacagatggcaagggatgagaggaac
cagtcgatcattgtaagtggagagtccggagcaggaaagacggtatcagccaaatacgcc
atgagatactttgctaccgtcagcggctccaccagcgaggccaacgtagagcagaaagtc
ttggcttccaaccctatcatggaggccattggaaatgcaaagacaacccgaaacgacaac
agcagtcgctttgggaaatacatcgagatcggctttgacacccgctaccgtatcatcggt
gccaacatgagaacatatctgctggagaaatcacgagtggtgtttcaggcggacgaggaa
agaaattatcatattttctatcagctctgtgcatcatcccatctgcctgagttcaagact
ctgaagctgagcagtgcaaacgactttttgtacaccaggcagggccgcagccccgtcatc
cagggtgtggacgacaccaaggagctgtccacaactcgcaatgccttcacattgctcggt
attaatgagtcctatcagatgggattgttccaggttttggctgctattcttcatctggga
aacgtggagataaaggacaaagactcagacagcagcctcattcctcccaacaatcgccac
ctgacggcattctgcgagttggtaggcgtgacgtatcaggacatgactcagtggctgtgc
cacaggaagctgaagacagccacggagacctatgtcaagaccctcccctgcctgcaggcc
accaacgcccgtgatgcgcttgccaaacacatctacgccaagctttttaactggattgtg
gagcatgttaacaaagccctaatcaccaatatcaaacagcactccttcatcggggtcctc
gacatctacgggtttgagacatttgagatcaacagctttgagcagttctgtatcaactac
gctaatgagaaactccagcagcagttcaacatgcatgtgttcaagctggagcaagaggag
tacatgaaggagcagatcccctggactctgattgacttctacgacaatcagccctgcatc
aacctcatagaagccaagatgggcatcctggacctgttagacgaggagtgcaagatgccc
aaaggctcggatgattcgtgggctcagaaactctacaacacccacctaaagacctgctcc
ctcttcgagaagccacgcatgtccaaccgcgccttcatcattcaacattttgctgacaag
caggtggaataccagtgtgaaggtttcctggaaaagaacaaggacacagtgaacgaagac
cagataaacgtgctgaaggccagcaagaagtttgacctgctggtggagctgttccaggac
gaggagaaagccaccagtcctactggtcaggtccctggcaccggaggccggacccgcctc
agcatcaaacctgacaagggtcgtgacaagagcagtaaggagcacaagaagactgtcggc
tgccagtttcgtaactctctgcaaatgctgatggatactttgaatgcaaccactccccac
tatgtccgctgcatcaaacccaatgacttcaagttggccttctcgtttgatcctaaacgt
gcagtgcagcagctcagagcctgtggtgtcctggaaaccatccgcatctctgccgcaggt
ttcccatccagatggacgtatcaggaattcttcagccgttacagagtgctgatgaagcag
aaggatgtgttatccgacaagaagttgacctgcagaaacgttttggagaaactggtggag
gaccaggataagtaccagtttggtaagactaagatctttttcagggccggccaggttgcc
tacctggagaagttgagggcggacaagttgcgtgtcgcctgcattcgcatccaaaaaacc
attcgttgctggttggcgcgcaagaagtacctgcgcaagcgcagcgctgccatcaccatc
cagaggttcaccagaggataccaggctcgctgcctggccaagttcatgcgtcgcacgcag
gcggccaccatcatccagaagtaccagaggatgtacatggagaggaaacgctacaagcag
aagcaggctgctgctctggtcatgcagaccatcctcagagcttatatggcccggcagaag
taccaggggttggtgcgggagcacaatgcagttatcattcagaagcgcgttcgcggctgg
ttggctcggtgctggtacaagcgctgccttgtctccctcgtgtacctgcagtgctgcttc
cgcaggatgaaggccagacgcgagttgaagaaattgaagatcgaggctcgctcagtggag
cacttcaagaagctcaacaaaggcatggagaacaagatcatgcagctgcagaggagaatc
gacgagcagagcaaggacaacaggtctatcaacgagaagctagtcagtctggagacttcc
tccacagcagagagggagcggatgcgtggcgagctgagccggctgcgcggggtggaggag
gacgccaagaacaaaggcaaccaggtgacctcgctgctggagcagctggagaagctaagg
aaggagctgagttccacacagaaggagaagaagaccatcgaggactgggcacaaacctac
agggacgaaatggagaaaatggtctcggagctgaaggatcagaattgctccctgaagaaa
gagaaggacgacttgaacaggttgattcaggaacagagtcagcagatgacagagaaaatg
gcccgtgctattgtagagaagactcagcagctggagacggatctgaacgaggagcgatct
cgctaccagaatctgctgacagaacaccgccgcctcgaggagaaatatgacgacctgaag
gaggcgatggtttcttcgaacgtgtccaagcctggccacaggagaacagattctacgcac
agcagcaacgaatcagagtacacctacaactcagagtacgccgaattggaagaaggttcc
cgtgctgccgaagatgtgacacgaggaatggacacctcgctgaccctcaagctgcagaaa
cgtctcacagaactggagcaagaaaagcagtcgctgcgcaacgaactggaaaaccgagag
gaccagttccaacgggctagagccagggatgacgttgagtttaaaaaggctcgcggggca
gagctggagtacgagtcccttaagcgtcaggagctggagtcggagaacaagaaactgaaa
catgacctggtggagattaggcgaagcctgctgggtaatgcagctacaggcgccggggcc
ccgggctccccggcttacaaggtggtcttggagcagctcaatgcctcctgtgaggagctg
gaggtccggaaggaggaggtgctgatcctgcgctcccagctggtcagccagaaggaagcc
atgcaccacaaggatgagaaggagaccatgaccgagccttccgcctatgttgaggatgtg
tccaaactgaaggacgctggtgaactcaagcaagcttacataggcctcaaagacaccaac
agatctcctaggttcatgcgtaaaccactggaagtcagtgatctcctgagtaggctgaga
tctgccgctccagacttccataagctgaatgaggacggagagctgtggctggttaatcag
ggcttaaaggaaaccatcaggttactggagcaccagctgcagactcagcggagaggttac
gatagcgaggtggagtcgttgcgcggcgagctgcagaatgtcaaggaggagaacaaccgt
cagcagcagctcttggcccaaaacctccagctgcccccagaggcccgaatcgaagccagt
ttgcaacacgagatcacccggctcaccaacgagaacttggaactcctggctgaagatccc
acagcatcccgagaggctcgagtcatcattttacgaaggatggttgatctaatggagcag
ctggagaagcaggaccgaactatccgcaagctcaagaagcagctgaaggtttactccaag
aggatcggagagatgggagcgggtcaaaccgagggacagacgtctccaggacagatggtg
gacgagccgattcacccggtcaacattccccgcagggagaaagatttccaaggaatgcta
gagtacaagaaggaggatgagctcaaactggtcaagaacctcatcctcgagctgaagcct
cgaggtgtagccgtgaatctgatcccaggtctgccagcctacatcctgttcatgtgtctg
agacatgcagactatgtcaacgatgaccagaaggtccgcaccctgctcacctcaaccatc
aacagtattaagaagatcctcaagaaacgaggagacgactttgagacggtctccttctgg
ctgtctaacacctgccgcttcttacactgtctgaaacaatacagcggtgatgaggccttc
attaagcacaacacgcagaggcagaatgaacacattctgtccaacttcgacctggcagag
tacagacaggtgatcagtgacctggccatccagatctaccagcagctaatcaagtgcatg
gagaacatcctccagcccatgatagtctctggcatgctggaacacgagaccatccagggc
gtgtcgggggtgaagcccacaggtctgcgtaagaggacatctagtatcgttgacgagggc
acctacaccctggactccatcctgcgccagctcagcgccttccactccactatgtgccag
cacggcaccgaccccgagctcatcaagcaggttgtgaagcagcagttctacattatcgga
gccgtcactctcaacaacctgctgttacgcaaggacatgtgttcctggagcaaaggcatg
cagatcaggtacaatgtgagccagctggaggagtggctcagagacaaaggtctgatgaca
tgcggagccaaggagactctggagcctctgatccaggccgctcagctgctgcaggtgaag
aaaaagactgacgaggacgccgaggccatctgctccatgtgcctggccctcaccactgct
cagatcgtgaaggtcctgaacctctacactccagtcaacgagtttgaggagagagtatct
gttgcattcatacgaaccatacagacccgcttacgagaccgttgtgagagtccccagttg
ttgatggacaccaagatgatttacccggtcactttcccattcaacccttcctccctcgcc
ctggaaaccatccagatccccagctcactcaacctgtcgttcctcacccgtgtctaa
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integrated database retrieval system
