Etheostoma cragini (Arkansas darter): 117946177
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Entry
117946177 CDS
T07493
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04020
Calcium signaling pathway
ecra04080
Neuroactive ligand-receptor interaction
ecra04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117946177
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117946177
04082 Neuroactive ligand signaling
117946177
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117946177
Ion channels [BR:
ecra04040
]
Ligand-gated channels
Glutamate (ionotropic)
117946177
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Ortholog
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
117946177
NCBI-ProteinID:
XP_034729987
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All DBs
Position
6:18340533..18392764
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AA seq
1964 aa
AA seq
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MVAIPTLSLLLVLAEWAGLVDTSSHLLLRPSPRERDAGAMMNFINIAVIHAGATVQAEAA
VAGPGGRVLYPSFGRVYSSLGESVITQWGPTNVIWLQVNDSSPKTVLSQLCELLAARPLQ
GLVYEEERPPRTAWGPLAPMLEFVSAQTGLPIVAVGGGAGLGRMPQESGSIFLQFSSSTA
LQLEVIFEVLEEYDWTSFSVVSTRHHGYQDFLSVVEGLTDGSFIGWEKKSVVILNVTDDP
GGARARRLLKENEAQVRLLYCSQEEAELVFRAAWAAGQAGASHMWFAVGPALSGLSLESL
PRALFAVRPQGWRDEPTRRIARGVSVLTHGAVAMRKDYGTTGVPNFVTNCMTDANQTQRL
RGRMRYFGNITLGGRDYSFNTDGYLSNPFLDVISWTPGRGWEDVGWWENGVLRLRYPAWS
RYGPFLKPPDDAQHLRVVTLEERPFVIVELADAASGTCIRDSVPCRRPLNASAIHEGVAP
MKQCCKGFCIDILKRLAKIVGFTYDLYLVTNGKHGKKIDGVWNGMIGEVVYKRADMAIGS
LTINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAV
TVFIFEFFSPVGYNRSLQNGKKAGGSTFTIGKSVWLLWAIVFNNSVPVENPRGTTSKIMV
LIWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQHPEEQYPPLKFGTVPNGSTE
KNIRSNYPDMHQYMGKYNQRGVEDAITNLKTGKLDAFIYDAAVLNYMARKDEGCKVMTIG
SGKVFATTGYGIALHKNSRWKRPLDLALLQLVGDDEIEMLERLWLSGICHNDKIEVMSSK
LDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWKLRHCMATSSGKLDFLLAISRGMYSCCS
FEDETAAAKSLPTHHHTSMVTVQSQPHVVSTSMTNPVIAMAQQQQPPQQQQPQPVYKTPL
PGSPPTVVHSGTALGPSNPPIAGAPLPCSTFLPRPDRRLAVVDRWRLPKTATATNPMAVR
GAITDMGPFAQKVPPNWASTDGGGGGIDGYKRYYGPIDPEGLGPCMEQQAGSQTPKTMPR
GHPQPPPASVAFYSEKGMDHGLGKRVVGGGSGGQGKGQVKGAVKPLGTPRLPSKSQAPLP
PTPPPPHPSPPLSSSFWRKRRPKKPKEPGGPLYENILPLGRRGGARDGVREGGGRRARPL
SPPLSLPVPVPLSPSYTPPSPSASLHYTSSSSSSTTSSTSTSSSASSSRSTSPTYSYSSS
RSTRDRTGGLDGEDDDDDEELTEESSLLLGRGRERERSITRPRSLSHGRLPPPIPPRKPR
TSWGDREKERERERGGSQLSQLQEWWASWSERERSGAGGDAERQKRERKRRKEKEKEKKK
KKKNKKRKKREERERERERERKRRKVKKKKKKELKTKKRKKSIGGRRSEPEEGDVEPERE
GEAEGEREGGIQDYSSFSAQYRSSFGEKGQDSWEGERDRGRREGGDEGNDREQEDSNRNR
ERRPKSSRSHSRHRIPSKRYPNLNKLPASVKFWVNGRGNDSNTPPTSLHPLLPSSKRRRS
GGMDRDDSGRVGERRPLLMHYEKEKAQTREGLSFPEWDSEDDEGDDDDDDEEEERDRVRE
QVGKGGRRTGRGAVSESERDRARAEDSYSDEGSSGEFGRFERYWEGGAGGSSTGIGGIGG
GGWFFGTYPSREKGGSINSRDDSLLGTRAEGWIGANFWGSGPGVGWGSGGGSGGLGSQWP
PPPAAFPPPRRYWSMDKIPVKGEKKWKSGGGKRKGRARDRGEEAGRVTMCSCSLFPQPHP
YPHPHNRSHTSHSKRGATVLSHSQEELLPHCHSFSGGSRPKPLPPKPDPSQPKSGSQSNL
SLSTQPTDHPPQPSPPPPQQQSMSPTSLPMPIPPPPSSSVSPPAGIGMVGQGQAQASASA
KLQYQRLRSVPQPRKFYSPHLPLKAKSLCSRRGSAHFSSLESEV
NT seq
5895 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccatacctactctctctctcctattggtcctggcagagtgggcgggtctggtg
gacacctcctcccaccttctgctccggcccagcccgcgggagcgtgatgcaggggccatg
atgaacttcatcaacatcgccgtgatccacgccggtgctacggtgcaggctgaggcggca
gttgcggggcctgggggaagggtgctctaccccagctttggccgggtatacagctccctg
ggggagagtgtgatcacccagtggggccctactaacgtcatctggctacaggtgaatgac
agtagtcctaaaacggtgctgtcccagctgtgcgagctgctggcggcgcggcccctgcag
ggtctggtttatgaagaggagaggccccctcgcactgcctggggtcctttggctcccatg
ctggagtttgtctctgcgcaaacaggactgcccatagtggctgtaggagggggagcgggg
ctggggaggatgccacaggaatcaggttccatctttctccagttcagctcctctactgcc
ctccaactggaggtcatctttgaggtgctggaggagtacgattggacatccttttctgtg
gtgtccacgcgtcaccatggctatcaggattttctctcggtggtggagggcctgaccgac
ggctcgttcatcggctgggagaagaagagcgtggtgatcctgaacgtgaccgacgaccct
gggggggcacgcgcgcgcaggctgctaaaggagaacgaggcgcaggtacgtttgctgtac
tgctcccaggaggaggctgagctggtcttccgagctgcctgggccgccggtcaggccgga
gcctcgcacatgtggtttgctgtggggccagctctttcaggtttaagcttggagagcctg
ccccgggccctgtttgccgtgcggccccagggctggagggatgaacccacccggaggatt
gctcggggtgtgtctgtgctgactcacggggcagttgcaatgcgcaaggattacggaacc
acgggtgtgccaaactttgtcaccaactgcatgacggacgccaatcagacccagagactg
cggggcaggatgaggtattttggcaacatcacacttggtggtcgagactattccttcaat
accgacggttacttgtccaaccccttcctggatgtaatttcctggacacctggacgtgga
tgggaagatgtaggctggtgggagaatggcgtgttgaggcttcggtacccagcctggtcc
cgctatgggccattccttaaaccacctgatgatgcccagcacctgcgtgttgtcacgctg
gaggaaaggccatttgtcattgtggagctggcagacgccgcgtccgggacctgcatccgg
gactcagtgccctgtagacgaccccttaatgccagtgccatccatgagggagtggctccc
atgaagcaatgctgcaagggcttctgcatcgacatcctcaagagattggccaagattgtc
ggcttcacctatgacctttatttagtgaccaatgggaaacatgggaagaaaattgatggg
gtttggaacgggatgattggagaggtggtttacaagcgagccgacatggccattggctcg
ctgactatcaatgaggagaggtcagaggttgtggatttctcagtcccttttgtggagacg
gggatcagtgtcatggtctcccgtagcaacggaactgtatcaccatctgctttcttagag
ccctacagtccagcggtgtgggtgatgatgttcgtcatgtgcctgaccgttgtggctgtg
actgttttcatttttgagttcttcagccctgtgggctacaaccgcagtctccaaaacggc
aagaaggctggaggctctactttcacaataggaaagtcggtatggcttttgtgggctatt
gtcttcaacaactccgtgccagtggagaaccccagaggaaccaccagcaagatcatggtg
ctgatttgggccttctttgctgtcatctttctggcctcctacactgctaacctggctgcc
tttatgatccaggaggagtacattgacacagtgtcaggcctctcggacaagaagtttcag
catcccgaggagcagtacccacccctgaagtttggcacggtgcccaacgggagcacagaa
aaaaacatccgctccaactacccagacatgcaccagtacatgggcaaatacaaccagaga
ggagtggaggacgccattactaacctcaagactgggaaactggatgcttttatttatgat
gctgcagtattgaactatatggccaggaaggacgaaggttgtaaggtgatgaccataggc
tcggggaaggtttttgccaccacaggctacggtatcgccctgcacaaaaactcacgttgg
aaacgtcctcttgacctggccctactgcagctggtgggagatgatgagattgagatgctg
gagcgcctctggctgtcaggtatctgccataatgacaaaattgaggtgatgagcagtaaa
ctggatattgacaacatggctggggtcttctacatgttgctggtggctatgggcctcagt
ctcctggtgtttgcctgggaacacttggtctactggaagctgcgccactgcatggccacc
agttctggcaaactggactttctcctggcaatcagcaggggcatgtatagctgctgtagc
tttgaggatgaaacagcagcagctaaatctttgccaactcatcaccacacttcaatggtt
acagttcaatcccagccacatgttgtctcaacgtctatgaccaacccagttattgccatg
gcgcaacagcagcaaccaccgcaacagcagcaaccacagcccgtctacaaaacacctcta
ccgggctctcctcccaccgtggtgcattctgggacagcactgggtccctccaaccccccc
attgctggtgcacccctcccttgctccaccttcctgccccggccagaccgcagactggct
gtggtggatcgctggaggctgcccaaaactgctacagccaccaatccaatggctgtgagg
ggggccatcactgacatgggaccctttgctcagaaggtcccaccaaactgggcttccact
gatggagggggagggggaattgatggctataagagatactatggtcccattgaccctgag
ggactggggccctgcatggagcagcaggcagggtcccagacccccaagactatgcccagg
ggccacccccagccccctccagccagtgtggccttttattcagagaagggcatggaccac
gggttggggaagagggtggtgggaggtggcagcggaggtcaggggaaaggtcaagtgaaa
ggggccgttaaacctctgggcactcctagattgccttctaagagtcaggcccctctgcct
cctacacccccgccgccacatccctctccccctctctcctcatccttctggaggaagcgt
aggcccaagaagcccaaagagcctggagggccactatatgagaacattctacccctgggg
cggaggggaggagcacgagatggagtgagggagggaggagggaggagggcacgccccctc
tctcccccgctctcacttcctgtgccagtacccctcagcccctcttacacccctccttcg
ccctctgcatctttgcactatacatcctcatcgtcttcgtcgaccacctcatccacatct
acgtcctcatctgcctcatcttctcgctccacctctcccacctactcttacagctcctct
aggagcacacgggataggactggaggactggatggagaggatgatgatgacgacgaggag
ctgacggaagagtcaagcctcctccttggcagggggagggagagggaacgctcaatcact
cggcctcgttcccttagccacgggcgcctgccaccacccatacctcccaggaaaccacgt
acctcctggggtgacagagaaaaggaacgggagagggagagaggaggaagccaactgtct
cagctccaagagtggtgggcaagctggagtgagagagagaggagtggagcgggtggagat
gctgagaggcaaaaaagggaaaggaagcggagaaaagagaaggagaaagagaagaagaag
aagaaaaagaacaaaaagaggaaaaagagagaagaaagggaaagggagcgcgagagagaa
aggaagcggcgaaaggtgaaaaagaagaagaaaaaggagctgaagacaaagaaaagaaag
aaatcaattgggggcagacgctctgagccagaggagggggatgtagagccagagagagaa
ggggaggcagaaggagagagggaagggggaatacaagactactcttcgttctctgcccag
tatcggagctcgtttggggagaagggacaagattcgtgggaaggagagagggatagaggt
agaagagaaggaggagatgagggcaatgacagagaacaggaggacagcaacagaaacagg
gagaggcgtcccaaatcctcacgttctcattccaggcatcgtatccccagtaagcgctac
cctaacctcaacaaactccctgcttcagtaaaattttgggttaatggaagaggaaatgat
tctaatactcctccaacatctctccacccactccttccatcctctaagcggagaagaagt
ggagggatggacagagatgacagcgggagagttggagagcgccggcctttgttaatgcat
tatgaaaaagagaaagcacagaccagagaagggctttccttccctgagtgggattctgag
gatgatgagggtgatgatgatgatgatgatgaggaagaggagagggacagagtgagggag
caggtggggaagggaggaaggagaacaggtaggggggcagtgtctgagtcggagagggac
agggccagggcagaggacagttattcagatgagggctcgtcaggggaatttggccgtttt
gaaagatactgggaaggaggtgcagggggaagcagcactggaatagggggcataggtgga
ggaggctggttctttggtacctacccctccagagagaaagggggaagtatcaacagtcgg
gatgattccttactaggaactcgggcagagggatggattggtgctaatttctggggttca
gggccaggagtaggttggggctcagggggggggagtggagggctcggctcacagtggccg
ccaccccccgcagccttccctccacctaggagatactggtctatggacaagatccctgtg
aagggagagaaaaagtggaagagtggaggagggaagcgcaaggggcgagctagggacaga
ggggaagaagcaggacgggtcaccatgtgttcctgtagcctttttccccaaccacatcct
tacccacatccccacaaccgctcgcacacctcccactccaagagaggagccacggtgctt
tcccatagccaggaagagcttctcccccactgccacagcttcagcgggggttctcgcccc
aagcctctgccccctaaaccagatcccagtcagcccaaatcaggcagccaatctaacctc
agtctcagcacacagcccacagaccatccacctcagccctcaccgccgccaccccagcag
cagtccatgtctcccacctccctcccgatgcccatcccgcctccaccctcatcctccgtg
tcaccaccagcaggcatagggatggttggccagggccaggctcaggcttcggccagtgcc
aaactccagtatcagagactgcgctcggtgccacagccacgaaagttctactccccccat
ctgccactcaaagccaagagcctgtgctcacgccgagggtcggcccacttctccagtctg
gagagcgaggtatga
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