Etheostoma cragini (Arkansas darter): 117946184
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Entry
117946184 CDS
T07493
Symbol
vars1
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117946184 (vars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ecra01007
]
117946184 (vars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecra03016
]
117946184 (vars1)
Enzymes [BR:
ecra01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
117946184 (vars1)
Amino acid related enzymes [BR:
ecra01007
]
Aminoacyl-tRNA synthetase
Class I (U)
117946184 (vars1)
Transfer RNA biogenesis [BR:
ecra03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117946184 (vars1)
Prokaryotic type
117946184 (vars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
GST_C_2
Arc1p_N_like
tRNA-synt_1e
GST_C_3
Jag_N
GST_C_7
Motif
Other DBs
NCBI-GeneID:
117946184
NCBI-ProteinID:
XP_034730003
LinkDB
All DBs
Position
6:19369679..19384657
Genome browser
AA seq
1277 aa
AA seq
DB search
MATLYVSPHPDDFRSLLALIAAEFCPSSNLKTVTEDPPASLNARSRPTLLLGSGEGDSVL
SGSSAVAWYLANQGNRSGIDTKQQSQVWQWLSFADNELTPVSCAVVFPLMGVIGVDKKLQ
QSSRAELMRILKVLDQALEPRTFLVGESVTLADMAVATAVLLPFKYVLEPSDRKVLTNVT
RWFTTCTNQPQFLKVLGNITLCEKMVPVTPKTNAAANAKAANPRPAVDSADATANGPPKT
EAQLKKEAKKREKLEKFQQKKDMEAKKKTQPLTEKKAKPEKKELGIITYSVPTPPGEKKD
VISPLPDSYSPQYVEAAWYSWWEKQGFFKPEYGRKSITDKNPRGVFMMCIPPPNVTGSLH
LGHALTNAIQDSLTRWHRMLGETTLWNPGCDHAGIATQVVVEKKLMRERGLNRHDLGREN
FIQEVWKWKNEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSCAVQEAFIRMHDEGVIYRS
KRLVNWSCTLNSAISDIEVDKKELSGRTLLPVPGYKEKVEFGVLVSFAYKVDGSDEEVIV
ATTRIETMLGDSAVAVHPADPRYQHLKGKMVLHPFCDRKMPIVSDEFVDMSFGTGAVKIT
PAHDHNDYEVGERHNLAFINILDENGLLINVPPPFLGMKRFEARKAVLQALKDRGQFKDI
KDNPMVVPVCSRSKDIVEPLLKPQWYVNCTDMGKQAADAVREGRLKIIPDHHLKTWFNWM
DNIRDWCISRQLWWGHRIPAYFITVNDPSVKPGEDMDGHYWISGRSEEEAREKAAKRFNV
SADKITLRQDEDVLDTWFSSGIFPFSIFGWPNETQDLNVFYPGTLLETGHDILFFWVARM
VMMGLKLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEGLHALLMDSN
LDPLEVEKAKQGQASDYPNGIPECGTDALRFALCAYTGQGRDINLDVNRILGYRHFCNKL
WNAVKFAMNTLGDNFVPSEKAELCGEESVSDRWILSRLSAAVGLCDAGFKAYDFPTITTA
IYNFWLYELCDVYLESVKPVFSKAEEDSASQREALLCRQTLYTCLDVGLRLLSPIMPFVS
EELYQRLPRRRPQSDPPSISVTPYPNTEEFCWHSEEVDRDMEFIMTVIKTIRSLRADYNL
TKTRADCYLQCIDAATVSLVQKYSLQIQTLSYSQAVIPVPGNQPVPGGCAVAIASDRCTV
NLMLKGLIDVEKEVTKLMTKKGDLEKQMEKMKEKIAKSDYKEKVPVKVQEQDADKLRQSQ
TELEKVKEAVDNFRKMM
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggccactctctacgtgtcccctcaccctgatgacttcaggagccttctggctctcata
gctgcagagttttgtccgtcctccaacctgaaaactgtcacagaggaccctcctgcatcc
ctgaatgcccgctccagaccgaccctgctgctgggttctggggaaggtgactccgtcctg
agcgggtccagtgctgtggcctggtatctggctaatcaggggaacaggtctggtatagat
acaaagcaacagagccaggtgtggcagtggctcagctttgcagacaatgaactcaccccg
gtgtcctgtgctgttgtcttcccactaatgggggtgataggagtggataagaagctccag
cagagttcccgtgcagagttgatgcgcattctgaaggttctcgatcaggccctggaacca
agaaccttcttggtgggggagagcgtcaccctggctgatatggctgtagctactgctgtt
cttctccctttcaaatatgtgttggagccgtcagacaggaaagtcctgaccaatgttacg
aggtggtttacgacttgcacaaatcagcctcagttcctgaaggtgttggggaacatcact
ctttgtgaaaagatggtgccagttacaccgaaaacaaatgctgccgcaaatgctaaagct
gctaatcccagacctgctgttgattctgccgatgccacagctaatggtccaccaaagaca
gaagcccagctgaagaaggaagctaagaagagagaaaagctggaaaagtttcagcagaag
aaggacatggaggcaaagaaaaagactcagccactgacagagaaaaaggccaaaccggaa
aagaaggagttgggcattatcacatacagtgtccccactcctccgggggagaaaaaagat
gtcattagcccgcttcctgactcctacagtcctcagtatgtggaggctgcctggtattca
tggtgggagaaacagggattcttcaagcctgagtatgggaggaagagtattactgacaag
aaccctcggggtgtcttcatgatgtgtatccctccacctaatgtgactggatcccttcac
ctgggtcacgccctcacaaacgccattcaggattctctgaccagatggcacaggatgcta
ggggagaccaccttgtggaacccgggctgtgatcacgctggcatcgccactcaggtggtg
gtggaaaaaaagctgatgagagagaggggtctgaaccgccacgatctgggcagggaaaac
ttcatccaggaagtttggaaatggaaaaatgagaagggagatcgtatctaccaccaactg
aagaagctgggctcctctttggactgggacagagcctgctttactatggaccctaaactt
tcctgtgcagtccaagaggcttttatccgcatgcatgatgagggtgtgatctacaggagc
aagcggctggtcaactggtcctgcacactgaactctgccatctctgacatagaggtggat
aagaaggagctcagtggcaggactctgttgcctgtgcctggctacaaagagaaagtggag
tttggcgtgttggtgtcgttcgcctacaaggtggacggatcagacgaggaagtgattgtg
gcaacaactcgtattgagactatgttgggagactctgctgtagctgtccaccctgctgac
cccagataccagcatctgaagggaaaaatggtgctgcaccccttctgtgaccgcaagatg
cctattgtctctgatgaatttgtggatatgagctttggaacaggtgctgtcaaaattacc
ccagcccatgaccataatgactacgaggttggagagagacacaatctggccttcatcaac
atcttggacgagaacggcctgctcattaacgtgcctcctcccttcctgggcatgaagcgt
tttgaggccaggaaggccgtgctacaggctctgaaggacagaggccagtttaaagacatc
aaagacaaccctatggttgtcccagtctgcagtcgttccaaagacattgtggagccgctg
ctgaagccgcagtggtatgtgaactgcacagatatgggcaagcaggcagcagacgctgtc
agagagggacgcctcaaaatcattcctgatcaccacctcaaaacgtggttcaattggatg
gacaacatcagggactggtgtatctcccggcagctgtggtggggtcatcgtattcctgct
tacttcatcactgtcaacgatccctccgttaagccaggagaggacatggacggtcattac
tggataagtgggagatcggaggaggaggccagagagaaagcagcaaaacgcttcaatgtg
tctgctgacaaaattaccctcagacaagatgaggatgttctggacacttggttctcgtct
ggcattttccccttctccatcttcgggtggcctaatgagacccaggacctgaatgtgttc
taccctggcaccttgctggagacgggccatgacatcctgttcttctgggttgctcgaatg
gttatgatgggcctcaaactgacaggcaagctgcccttcaaagaggtttatcttcatgca
gtggtgagggacgcccacggaaggaagatgagcaaatctttgggcaacgtcattgaccct
ctggatgtcattacagggatctccctcgagggtcttcatgcccttttgatggacagcaac
ttagatccactggaggtggagaaggcaaagcagggccaggcatcagactacccaaatggc
atcccagagtgcggcacagatgctctccggttcgccctgtgtgcttacactggccaaggt
agggatatcaacctggatgtcaaccgcatcctgggttaccgtcacttctgcaacaaactg
tggaacgctgtgaagtttgccatgaatacactgggagacaactttgtaccatcagagaaa
gccgagttgtgtggagaggaaagtgtatcggacaggtggattctgtctcgactgagtgct
gctgttggtctctgtgatgctggcttcaaggcctatgacttcccaaccatcacgaccgcc
atttataacttctggctgtacgagctctgcgatgtctacttggaaagtgtgaaaccagtg
ttcagtaaagcagaggaagacagcgccagccagagagaggccctgctgtgcagacaaacc
ctttacacctgtttagatgtcggtctccgccttctttcacctattatgcccttcgtcagc
gaagagctctaccagaggttaccacgtcgacgacctcagagtgatccccccagcattagt
gtcacaccataccctaatacagaggagttctgctggcacagtgaggaggtcgaccgtgac
atggagttcataatgaccgtgatcaagacgatccggtcactgagggctgactacaacctg
accaagaccagagctgactgctacctccagtgcatagacgctgcgactgtgtccctggtg
cagaagtacagcctgcagattcagaccttgtcttattctcaggccgtcattcctgtgcca
ggaaaccagcctgtcccaggaggctgtgctgtggctattgcctctgacaggtgtactgtc
aaccttatgctcaagggtcttattgatgtggagaaggaagtgactaagctgatgacaaag
aaaggtgacttggagaaacagatggagaagatgaaagagaaaatagcaaagagcgactac
aaggagaaggtgccagtgaaggtgcaagagcaggatgctgataagcttcggcagagtcaa
actgaacttgagaaagtaaaagaagccgtggacaacttcaggaaaatgatgtga
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