Etheostoma cragini (Arkansas darter): 117946203
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Entry
117946203 CDS
T07493
Symbol
nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase isoform X1
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecra03009
]
117946203 (nop2)
Enzymes [BR:
ecra01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
117946203 (nop2)
Ribosome biogenesis [BR:
ecra03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117946203 (nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
PCMT
FtsJ
Motif
Other DBs
NCBI-GeneID:
117946203
NCBI-ProteinID:
XP_034730045
LinkDB
All DBs
Position
6:18824606..18830795
Genome browser
AA seq
751 aa
AA seq
DB search
MGRKLDPTNKVKRGPGRKSRKQKGAETELAKFITNDDETAPKRLSSRGRKRAAKRVQNSK
KPKDAEEEQLKKGFTDENSKWLKPAKKKRKIDEPKNEDDSDEHWEEDDDDEEEEPKLKKG
GKDQGKKEEEEEEDDDDEDEMVDDYGTLDDGSGEEAVEEESDGEELLPIERAAKKAKKLQ
ETMALESDDDDDDEKEDDDEEEKKSEADMDEEDTVQANMDEMDKFRLPGVEESEREGIMS
LDLKTIHQRIKDNIDVLCNFATKREEGKERAEYISLLKKDLCTYYSYNHFLIEKLMDLFP
LSELVDFLEANEIQRPVTIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVIYDSSV
PVGATPEYLSGQYMLQGASSFLPVMALSPQEGELVLDMSSAPGGKTTYIAQLMRNTGMIV
ANDANADRLKSVVGNVHRLGVTNTVICNYDGRQFPKVMGGFDRVLLDAPCSGTGVIAKDP
AVKTSKDEADIQRSAHLQKELILSAIDSVNAESPTGGYLIYCTCSIMVEENEWVVDYALK
KRNVKLVSTGLDFGKEGFTRFKERRFHPTLRMSRRFYPHSHNMDGFFVAKLKKFSNVIPT
APAAKVEEDIADAPEATAVTNSPEEKPSKSSKTKKIVPAKAGGLKTKPRANGTEAKKRAN
AKPKGKKDLSAGPKKAKVAMMDGATVKGTEAKKPAVKTADETKVSKADKKEGSRFEKKQG
KKRKTPMKAKDRMGKNKFRKLKHLLGKQGGE
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggaagttggatcccaccaacaaggtgaagcgaggaccagggaggaaatccaga
aagcagaaaggagcggagaccgagttggccaagtttataactaatgatgatgaaactgca
ccaaagcgcctgtcaagtagaggcagaaaaagagctgcaaaaagagtccagaactcgaaa
aagcctaaagatgctgaagaggaacagctcaagaaaggattcactgatgagaacagtaaa
tggttgaaaccagctaagaaaaagcgcaaaattgatgaacccaaaaatgaggatgacagt
gatgaacactgggaggaagatgatgacgatgaagaggaggagccgaagctgaagaaggga
ggaaaagaccaaggaaagaaggaggaggaggaggaggaggatgatgatgatgaagatgaa
atggttgacgactatggtacactcgatgacggcagtggtgaggaagcagtggaagaagaa
agtgatggggaggaacttcttcccattgagcgtgcagccaagaaagcaaaaaagctgcag
gaaaccatggctctagagagtgatgacgatgacgatgatgagaaggaagatgacgatgaa
gaggaaaagaaatccgaggctgacatggacgaggaagacactgtgcaggccaacatggat
gaaatggataaatttaggctacctggtgtagaggaaagcgagagggaaggcatcatgtct
ctggacctgaagacaatccatcaaagaataaaggacaacattgatgtcctttgtaatttc
gcaaccaaaagggaagaggggaaagagagagcagagtacatctctcttttgaagaaggat
ctctgtacttattacagctacaaccacttccttattgagaaattaatggacctcttccct
ctttcagagctggttgatttcctcgaggccaatgaaattcagagacctgtcactatccgg
accaacacactgaaaacaaggaggagggatcttgcacaggccttgatcaacaggggagtg
aaccttgatccactggggaaatggtctaaagtgggtttggtcatctatgactcctcagta
cctgtaggtgcaaccccagagtatctgtctggtcagtacatgctgcaaggagcctccagt
tttctgcccgtcatggcgctctctccacaggagggagagctagtgttagacatgagttca
gccccaggaggcaagaccacctatattgctcagctgatgagaaatacggggatgatcgtg
gctaacgatgccaacgctgacagattgaagagtgtggtaggcaacgtccaccgtctgggt
gtcaccaacactgttatctgcaactacgatggaaggcagttcccaaaggtgatgggtggg
tttgatagagtgctgcttgatgctccgtgctcaggcacaggagttattgctaaagatcca
gctgtgaagaccagtaaggatgaggccgacatccagcgctctgctcacttgcagaaagaa
ttgattttatctgcaattgactctgtcaatgcagagtcccctacaggaggatatctgatc
tactgcacgtgttcaataatggtggaggagaatgaatgggtggtggactacgctttaaag
aaaaggaatgtaaaattagtttcaactggacttgactttggcaaggaaggcttcaccagg
ttcaaagaacgtagattccaccctactctgcgaatgtctcgcagattttaccctcattcc
cataatatggatgggttttttgtggccaagctgaagaaattctccaatgttattccaact
gcaccagcagcaaaagtagaagaagacattgcagatgctcctgaggcgacagctgtaaca
aactcacctgaagagaaaccatccaaaagtagcaagacaaagaagattgtccccgcaaaa
gcaggcggcttaaagacgaaaccccgagccaatggaacagaagccaagaaaagggcaaat
gccaagccaaaaggcaaaaaggacttatctgctggaccaaaaaaagcaaaggtcgccatg
atggatggagcgactgtaaaggggacggaagccaagaagcctgcagtgaagacagctgat
gaaactaaagtttcaaaggctgacaaaaaagaagggagcagatttgaaaaaaagcaaggc
aaaaagagaaaaacacccatgaaggcaaaggacagaatgggaaagaataaattcagaaag
ttgaagcacctgttgggaaaacaaggcggagagtga
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