Etheostoma cragini (Arkansas darter): 117946206
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Entry
117946206 CDS
T07493
Symbol
pou2f2a
Name
(RefSeq) POU domain, class 2, transcription factor 2 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117946206 (pou2f2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117946206 (pou2f2a)
03021 Transcription machinery [BR:
ecra03021
]
117946206 (pou2f2a)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
117946206 (pou2f2a)
Transcription machinery [BR:
ecra03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
117946206 (pou2f2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Com_YlbF
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117946206
NCBI-ProteinID:
XP_034730052
LinkDB
All DBs
Position
6:19574671..19614091
Genome browser
AA seq
732 aa
AA seq
DB search
MFVPLPVPFVFQRTAPDLNAWRLKSPLALRSNSDIRMSKPVEVEKVGAESPMEGTDSERN
GPESNHQAQSMKVNPFPLSPTLSSSKHKMEECGDMSPALPLSHGPTPSQTALQHTQLMLT
GSQLAGLTALLPAQQQLLLQQAQAQLLAAAVQQSSAAHAAHAAHAAAQANQQAQAVAAAN
QQAQQQQQAGQTGQQAQSQSQGQSTQEQIAQSVPVPPPPPQLTLSQPIQLTAQDIQQLLQ
LQQLVLVPGHSLPSPAQFLLPQAQQGQQGLLSTPNLISLPQQNQGSLLSASTRMGLQAQR
DKSMEVSGVTTVPSVNSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGND
FSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSTDCTMPSPSSLSSPSMGFDGIPG
RRRKKRTSIETNVRVALERAFMTNQKPTSEEILLIAEQLNMEKEVIRVWFCNRRQKEKRI
NPSSATPPLPSQPPTAPPTHKSSCYSPHMMSSQLSQAVTSLSTTVTTMSPVCPLTSSLTS
THPSLSSAPSPVTPPPPRSTASPATPSHSTLNLNTGLWRMGKKNGDVSNYITDFAANLRN
TVMGVNTGMNQALLGNNPLATIQALAASGGQLPLSSLEGASKVMLGACGSQGGGIPSSFF
LNHPALLHMGQNPGAGLLSAAIAKASQASPFPSASSISPTLCSPSPCSSPASSCSSSEMA
HSPPSLGGAKIE
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcccttgccggtgccgttcgtgtttcagagaactgcccctgacctcaacgcc
tggcgtctcaagtcccctctggctcttcgctccaactccgatatcaggatgtcaaagcca
gtagaggtcgagaaggtaggggccgagtccccgatggagggcacagattcagagcggaat
ggacctgaatcaaatcaccaggctcagtcaatgaaagtcaatccatttcccctttcacca
accctgagcagcagcaagcataagatggaggagtgtggtgatatgtccccggcccttcct
ctctctcacggcccgaccccctcacagacggccctgcaacatacacagctcatgctgacc
ggctcccaacttgcagggttaacagctctgttgccagcgcagcagcagctgttgctgcag
caggctcaggcgcagctcctggctgcagctgtgcagcagtccagtgcagcccacgccgct
catgctgcccacgcagctgcccaagcaaatcagcaagctcaggcagtcgcagcagcaaat
cagcaagcccagcagcagcagcaggcgggacaaacggggcagcaggcccaatcgcagtcc
cagggacagagcacacaggaacagatagcccaaagtgtccctgtcccacctcctccaccc
cagctcaccctctcccagccaatccagctcaccgcccaggacatacagcagttgctgcag
cttcagcagttggtgttagtgcccggccactcgctcccatcccctgcccagttcctcctc
ccacaggcacagcagggccagcaaggactcctatcgacaccaaatcttatttcgctacct
cagcaaaaccaagggagcctgctgtctgcttcaactagaatgggactccaagcacagcgc
gataagagcatggaggtgagcggtgtgactacagtaccctcagtgaactctcaccctgag
gagcccagtgacctggaggagctggaacagtttgcccgcactttcaaacagagacgcatc
aagctgggcttcacacagggagatgtcggtttggccatggggaagctgtatggcaacgac
ttcagtcagaccacaatctcccgctttgaagcccttaacttaagctttaagaacatgtgc
aagctgaagccactgctggagaagtggctcaatgatgcagagaccatgtccacagactgt
accatgcccagccccagctccctgtcctctccctcaatgggcttcgacgggattcctggt
cgccgcagaaagaagagaaccagcattgagacgaatgtgcgcgtggccctggaacgcgca
ttcatgacgaaccagaagcctacctcagaagagatcctgctgattgcagagcagctcaac
atggagaaggaggtgatccgggtctggttctgcaaccgccggcagaaagagaaacgcatc
aatccctccagtgccacccctcccttgcccagccagccccccactgcccccccaacgcac
aaatcgtcctgctacagccctcacatgatgtccagccagctgtcgcaggccgtgaccagt
ctcagcacaacagtgaccaccatgtcgcccgtctgtcccctgacttccagccttacctcc
acccacccctctctcagctccgcaccctccccagtgactcctcctcctccccgcagcaca
gccagcccagccacccccagccacagcacactcaatcttaacacaggcttatggcgtatg
ggtaaaaagaacggtgacgtgtctaactacatcaccgattttgctgcaaacttgaggaac
actgtgatgggagttaacacagggatgaaccaagccctcctcggtaacaatcccctggcc
actatccaagccctagcagccagtggtggccagctgcccctttccagtcttgagggggcc
agtaaggttatgctgggggcctgtgggagccagggagggggcatcccctcctccttcttc
ctcaaccaccccgccctcctccacatgggccagaaccccggcgctggacttctcagcgct
gccatagccaaagcctcccaggcctcccccttcccctcggccagcagcatcagccccacc
ctctgctccccctcgccctgctccagccccgcctcttcctgctcctccagcgaaatggca
cacagcccgccctctctgggcggagccaagattgagtga
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