Etheostoma cragini (Arkansas darter): 117946211
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Entry
117946211 CDS
T07493
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117946211 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117946211 (vps35)
Membrane trafficking [BR:
ecra04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
117946211 (vps35)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
117946211
NCBI-ProteinID:
XP_034730108
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Position
1:complement(7378790..7416074)
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AA seq
798 aa
AA seq
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MPTTQQSPQDEQEKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVR
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQPEGTEEMTGDIND
SIDFVLLNFAEMNKLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVDKY
KQIVLSGVLEQVVNCRDSLAQEYLMECIIQVFPDEFHLQTLNPFLRSCAELHQHVNVKNI
IIALIDRLALFAHREDGPGIPSEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLA
IKCYPDRVDYVDKVLESTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLQL
KHFPPLFEYFDYESRKSMSCYVLSNTLDYNTTILEQEQVDAILSLVSTLIQDQPDQPADD
PDPEDFAEEQSLVGRFIHLLHSEDPDQQYLILNTARKHFGAGGNLRIRYTLPPLVFAAYQ
LAFRYKENSSLDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFEN
HETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMRCFSEENHEPLRTQCALAAS
KLLKKPDQCRAVSICAHLFWSGRSTEKNGEEIRDGKRVMECLKKALKIANQCMDPSLQVQ
LFIEILNRYICFYERENDAVTVQVLNQLIQKIREDLPNLEASEETEQINKHFQNTLEHLR
LQRESPESEGPAYEGLVL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccacacagcagtctccccaggatgaacaggagaagcttctcgatgaagctgtg
caggctgtcaaggtccagtccttccagatgaaacgatgcctggacaagaataagctgatg
gatgctctgaagcacgcctctaacatgctgggtgagctgaggacctccatgctttctcca
aagagctactacgagctctatatggctatatctgacgaactccactacctagaagtttat
ctgactgatgagtttgccaaaggacgtaaggtggcagatctctatgagctggtccagtat
gcaggaaacatcatccccagactctatctgctaatcacagtgggtgtggtgtacgttcgc
tccttcccccagtctcgtaaagacattcttaaggacctggttgagatgtgtcgtggtgtc
cagcacccactcaggggcctcttcctcagaaactacctgttgcagtgcacccggaacata
ctgccagatgatggagagcagccggagggaacagaggagatgaccggtgacatcaatgac
tccatcgactttgtccttctgaactttgccgaaatgaacaagttatgggtgcgaatgcag
catcagggtcacagccgtgaccgggagaagagagaaaaggaacgacaagaactcaggatt
ctggtgggcaccaacctagttcggctcagccagctggagggtgtcaacgtagacaagtac
aaacagattgtactttcaggagtgctggagcaggttgtgaactgcagagactcgttggct
caggagtatctaatggagtgcatcattcaggttttcccagatgagttccaccttcagacc
ctgaaccctttcctacgttcctgtgctgagctccatcaacatgtcaatgtcaagaacatc
atcattgctctcattgacagacttgctctgtttgctcatcgagaagatggccctggcatt
ccatctgagatcaaattgtttgacatcttctctcagcaagtggccactgttattcaatct
cgccaggatatgccttcagaggacgtggtctctttgcaggtctctctcatcaacttggcc
attaaatgctaccctgaccgtgtggactatgtagataaggtcctggagagcactgtggag
atattcaacaaactcaacttggaacacatagcgaccagcagcgcagtgtcaaaggaacta
acccgactgttgaagatcccagtggatacctacaacaacatcctgaccgtgctgcagctc
aaacacttcccaccactctttgagtactttgactatgagtcacgcaagagcatgagttgc
tatgtgctgagcaacacactggactacaacaccaccattctggaacaggaacaggtggac
gccatcttgagcttggtatccacgttgatacaggaccagccagaccaaccagctgatgac
cctgaccctgaggactttgctgaggagcagagccttgtgggtcgtttcatccatctgctc
cactccgaagatccggatcaacagtatcttattctgaacacagcccgaaaacactttggt
gcgggtgggaaccttaggattcgctacacacttcctcctctggtgttcgctgcctaccag
ctggccttcagatacaaggagaactcctcattggatgacaagtgggaaaagaagtgtcag
aagatcttttccttcgcccaccagaccatcagtgcacttatcaaggcggagcttgccgag
ctgcctcttcgactcttcctccaaggggcgctagctgcaggggagattggttttgagaac
catgagactgttgcttatgagttcatgtcacaggccttctctctgtacgaagatgagatt
agtgactctaaagcccagttggctgccatcacactgatcattggtaccttcgagcgtatg
cgatgtttcagcgaggaaaaccatgagccactgaggactcagtgtgcactggctgcctcc
aagctgctgaagaagcctgaccagtgccgagccgtcagtatctgtgcccatctcttttgg
tcaggtcgcagcactgaaaaaaatggtgaagagatccgcgatggtaagcgggttatggag
tgtctaaagaaagccctgaagattgccaaccagtgtatggacccatcgctgcaagtccag
cttttcattgaaatcctcaacagatacatctgcttctatgagagagaaaacgatgcggtg
actgtccaggtattaaaccagctcatccagaagatcagagaagaccttcccaacctggag
gcgagtgaggaaaccgagcagatcaacaaacacttccaaaacacactggagcatcttcgc
cttcagagagagtcccccgagtctgagggacccgcctatgagggcctggtcctttaa
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