Etheostoma cragini (Arkansas darter): 117946350
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Entry
117946350 CDS
T07493
Symbol
lrrc4cb
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117946350 (lrrc4cb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecra04515
]
117946350 (lrrc4cb)
Cell adhesion molecules [BR:
ecra04515
]
Immunoglobulin superfamily
NGL family
117946350 (lrrc4cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
V-set
ig
LRR_9
Ig_2
LRRNT
Ig_6
Syndecan
Motif
Other DBs
NCBI-GeneID:
117946350
NCBI-ProteinID:
XP_034730320
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All DBs
Position
1:8568416..8612899
Genome browser
AA seq
631 aa
AA seq
DB search
MLNTMISSLQRQTMRGHRLKGALSNPLFVLLLALQILVVAGLVRAQTCPSVCSCSNQFSK
VICTRRSLRDVPDGISTNTRYLNLQDNLIQVIKVDSFKHLRHLEILQLSKNHIRSIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISDGAFKDLSNLRYLNLGMCNLKEIPNILPLVRLEELEMSGNQLSVVKPSSF
LGLVNLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTFLPHDLFTPLHRLERVHLH
HNPWNCNCDILWLSWWLKEAVPANTSCCARCHSPAVFKGRYIGELDHSYFQCDVPVIVEP
PSDLNVTEGMGAELKCRTSSLTSISWLTPNGSLVTHGAYKVRLSVLNDGTLNFTSVTMQD
TGTYTCMVSNTAGNISASAVLNVTSVENSGVTYFTTVTVETIETPGDDSQTPLPPFGWVS
SSTTKGTPVSTRTTERTYTIPVLDLDGEGALNGLDEVMKTTKIIIGCFVAITLMAAVLLV
IFYKMRKQHNQQDPDGPASSMEVITVEEELAGVAAMERHLTLPPLEHYNHYNTYKNTYHH
APMLSTIHSSTTQEPLLIQACSKDNVQETQI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacacaatgatttcttccctccagcgccagacaatgagaggtcataggctgaag
ggggcgctgtccaaccccctctttgtgctgcttttggccctccagatcctggtggtggct
ggactggttcgcgctcagacctgtccttctgtctgctcatgcagcaaccagtttagcaaa
gtaatatgcacccgacgcagtctgcgggacgtcccagatggcatttccaccaacactcgc
tacctgaacctccaggacaacctcatccaggtcatcaaggtggacagtttcaaacatctg
cgccatctggaaatcctgcagctgagcaagaaccacatccgcagcattgaaattggcgcc
tttaatggactggccagtctcaacaccttggagctctttgataatcggctcacaacaatc
cccaatggagcatttgagtacttgtctaagctgaaggaattgtggctacggaacaacccc
atcgaaagtataccatcttatgccttcaaccgggtcccctcgcttcgaaggctggatcta
ggtgagctcaaacgtctctcctacatttcggatggagccttcaaggacttgagcaatctg
cgctacctgaacctgggtatgtgcaacctcaaggagatccccaacatcttacctttggtc
agacttgaagagctagaaatgtcaggaaaccagctctcggttgtcaagcccagctccttt
ttaggtttagtgaacctccaaaagctgtggatgatgcatgcccagatccaaacaattgag
aggaattcctttgatgatcttcagtcactggttgagctcaacctggctcacaacaacctt
acctttttaccacatgacctcttcacaccattgcatcgcctggagcgggtccacctccat
cacaacccttggaactgtaactgtgatatcttgtggctcagctggtggctgaaggaggca
gtacccgccaacactagctgctgtgcccgttgccattctcctgcagtctttaaaggtcgc
tacattggggaattggaccacagctacttccagtgtgatgttcctgtcattgtggagcca
cccagtgacttgaatgtgacagaaggcatgggtgcagagcttaaatgtcgtaccagctcg
ctgacatccatcagctggcttacaccaaatggttctttggtgacacatggggcttacaag
gtgcgtttgtctgtacttaatgatgggacactgaacttcactagcgtcacaatgcaggac
actgggacttacacctgtatggtaagcaatacagcaggcaacatttctgcctctgctgtg
cttaatgtcacttctgtggaaaacagtggagtgacctattttaccacagtcaccgtggag
accattgagactccgggggatgatagccaaacgccgcttcccccatttggctgggtctca
tcctctacaacaaaagggactcctgtttcaacccggaccacagagcggacttatacaatt
ccagttcttgatctggatggagagggagccctcaatggcctagatgaggttatgaaaacc
accaagattatcataggctgctttgtggccatcacacttatggctgctgttctgctggtt
attttctacaagatgaggaagcagcataaccagcaggatcctgatggccctgcctcctcc
atggaggtcattacagttgaagaagagcttgcaggtgtcgctgccatggagagacaccta
accctgccccctctggagcactacaaccactacaacacctacaagaacacttaccaccat
gctcctatgctcagtaccatacacagctcaaccacacaggaacctttactgattcaagcc
tgctcaaaagacaatgtacaagagacccaaatctga
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