Etheostoma cragini (Arkansas darter): 117946358
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Entry
117946358 CDS
T07493
Name
(RefSeq) glutamate receptor ionotropic, kainate 3
KO
K05203
glutamate receptor, ionotropic kainate 3
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04080
Neuroactive ligand-receptor interaction
ecra04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117946358
04082 Neuroactive ligand signaling
117946358
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117946358
Ion channels [BR:
ecra04040
]
Ligand-gated channels
Glutamate (ionotropic)
117946358
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Scramblase
Motif
Other DBs
NCBI-GeneID:
117946358
NCBI-ProteinID:
XP_034730326
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All DBs
Position
6:21093142..21189225
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AA seq
918 aa
AA seq
DB search
MRNTWLSPRSAIWEYWTSLIACLFWIHYSNGMPHVIRIGGIFEQTDGPVSLVSAEELAFK
FAVNNINRNRTLLPNTTLTYDIQRINIYDSFEASRKACDQLSLGVVAIFGPSHSSSSNAV
QSICNALEVPHIQVRWKHHPMDNRDSFYANLYPDYSSLSYAILDLVQFLKWKTATVVYDD
STGLIRLQELIMAPSRYNIRLKIRQLPLDTQDTRPLLKEMKRSREFRIIFDCSHHMAAQI
LKQAQTMGMMTEYYHYIFTTLDLMAIDLEPYRFCGVNMTGFRILNVDNPQVASIVEKWSM
DRQMPFKPDSGLLEGIMTTDAALTYDAVHIVSVSYQHAPQMTVNSLQCHRHKPWRFGGRF
MSFIKESHWDGLTGRLSFNKTSGLRTDFDLDIVSLKEDGLEKVGKWSVSGGLNITELPKR
KGMNITDSLANRSLVITTILEEPYVMLKKSDKALVGNDRFEGFCIDLLKELANVLGFTYE
IRLVPDGRYGSQDDKGQWNGMIRELIEHRADLAVAPLTITYMREKVIDFSKPFMSMGISI
VYRKPNTTKNGFFSFLNPMTPDIWVYILLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSD
VVENNFTLLNSFWFGVGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLT
VERMDSPVDSADDIAKQTKIEYGVVKDGATMSFFKKSKVSTFEKMWAFMSSKPSTSLVKS
IEDGIQRVLKSDYALIMESTTIDYITRRNCNLTQVGGIIDSKGYGIGTPLGSPYRDKITI
AILSILEDGRLHMLKEKWWSGSSCLDEERHETGPMGIQNLGGIFIVLASGLVLSVFVAIA
EFIYKLRKTADREQRSLCSAMMDEIRLSFTCERRVKHKPQPPAMVKTDAVINMHAYNDRR
LPGKDNLSCSTGMTPVFP
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaatacttggctgtctccacggagtgcgatttgggaatactggacatcgctgatt
gcatgtctcttttggattcactactctaacgggatgcctcatgttattcgaataggtggg
attttcgaacaaaccgatggacctgtttcacttgttagtgctgaggagcttgcctttaaa
tttgctgtcaataacattaacagaaacagaactttgttgccaaacacaacattaacatat
gacatacagaggattaatatctacgacagttttgaggcgtcaagaaaagcttgtgaccag
ctatctttaggtgtggttgcaatatttggtccctcacacagttcttcgtcaaatgccgtg
cagtccatctgcaatgcgttggaagtgccacacatccaggtgcggtggaaacatcacccc
atggacaacagggacagcttttatgccaatttatacccggattattcctcactaagctat
gctatcctggacctggtgcagtttctcaaatggaaaacagccactgtcgtctatgatgac
agcacaggtctcataagactacaggagctgataatggccccatccaggtacaacattagg
ctaaagatccgtcagcttcctcttgacacacaggatacgagaccacttcttaaagaaatg
aagagaagccgggagttccggataatctttgactgcagtcaccacatggccgcacagatt
ctcaaacaggcccagaccatggggatgatgacagagtattaccactatatcttcaccact
ctggacctgatggccattgacctggagccgtatcgcttctgtggtgtcaacatgaccggc
ttccgcatccttaatgtggataatccccaggttgcatccattgtggagaaatggtcgatg
gataggcagatgccttttaaacccgactccggcctcctagagggcatcatgacgacagat
gcggctctgacctatgatgcagtccacattgtatccgtctcataccagcacgctccacag
atgacggtaaactcgctgcagtgccaccgccacaaaccctggagattcggagggcgcttc
atgagttttatcaaagagtcccactgggatggtttgacggggagattgtcattcaacaag
acaagtggtcttcgtacagacttcgacctggacatcgtcagtctaaaggaggacggacta
gaaaaggtggggaagtggagtgtgtcgggaggtcttaacatcacagagttgccaaagcga
aaagggatgaacatcactgattccctggccaaccgctcccttgtcatcacaactattctg
gaggagccatacgtcatgcttaagaagtctgacaaggcactggttgggaacgaccgtttt
gaaggattctgcattgacttgctcaaagagctggccaatgtcctgggcttcacgtatgag
atccgcctcgtgcctgacgggagatatggctctcaggacgacaagggccagtggaacggc
atgataagggaacttatagagcatagagcagacttggcagtggctcctctcaccatcacc
tacatgcgtgaaaaggtcatcgacttctcaaagcccttcatgagcatgggaataagcatt
gtgtatcgcaaacccaataccaccaaaaacggcttcttctccttcctgaaccccatgact
cctgacatctgggtctacatcctcttggcctacctgggtgttagctgcgtcctttttgtc
attgccaggttcagcccgtatgaatggtatgacgctcatccttgtaaccccggatcagat
gtggtggagaacaactttacccttctcaacagcttctggtttggagttggatctttaatg
caacaaggctcagaactgatgcccaaagccctgtcgaccaggatcatcggtgggatctgg
tggttcttcacactcataattatatcctcctatacggcaaatttagccgcttttctcact
gtggagagaatggactcgcctgtggactcagccgatgacatcgctaagcagaccaagatt
gagtatggtgtggtcaaagatggcgcaaccatgtctttcttcaagaaatctaaggtttct
acttttgagaagatgtgggccttcatgagcagcaagccgagcacatcactggtaaagtct
attgaggatgggattcagagggtgctgaagtcagactatgccctcattatggagtccaca
actattgattacattaccaggaggaactgtaaccttactcaggtgggagggatcatcgac
agcaaaggctacggcatcggcactcctctaggctccccttacagagacaaaatcaccata
gcaatcctaagcatcttggaggatgggcgcctacacatgctgaaggagaagtggtggagt
gggagcagctgcttggatgaagagcgccatgagacaggccccatgggtattcaaaacctg
ggtggtatattcattgtgctggcatctggcctagtgctgtctgtctttgtggcgattgct
gaattcatctacaagctaaggaagactgcagatcgtgagcagaggtctttgtgcagtgcc
atgatggacgagatcagactgtcgttcacctgcgagagacgggtgaaacacaagcctcag
cctccagccatggtgaagacggatgcagtgatcaacatgcacgcctacaacgaccgacga
ctcccaggaaaggacaacttgagctgcagcactgggatgactcctgtgttcccatga
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