Etheostoma cragini (Arkansas darter): 117946431
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Entry
117946431 CDS
T07493
Name
(RefSeq) polycomb protein SCMH1 isoform X1
KO
K11461
polycomb protein SCMH1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117946431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecra03036
]
117946431
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
117946431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
RBR
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
117946431
NCBI-ProteinID:
XP_034730465
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Position
6:complement(20700902..20722231)
Genome browser
AA seq
729 aa
AA seq
DB search
MRKPVPQKAIEWKDARRIKHARSGRPSRVPSQYQGHFSWEKYLKETGAAAAPSACFRQSL
TPPLNEFKAGMKLEAQDPRNTTSTCIATVVGLTGSRLRLRLDGSDNKNDFWRLVDSSEIQ
PIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPSRIFHKQEPPAPEQNSFQIG
MKLEAVDRKNPHFICPATVGALRGVEVLVTFDGWRGAFDYYCRYDSRDIFPVGWCALTGD
NLQPPGTKVVLPKSLGTLTDGSVESPAMHPTPTVGRPLGQRGRKPGRRKTKLAGPWNQKG
SVLGPPSIQPGKGLEPIKIPKKRGPKPGSKLGWAKRAGWLEDAMAGPGRPVTGPGRTRGR
LPANWAQRIALQEPQTPAEPIKIPKKRGPKPGSKRKPRVVPNPVPTSPTISTPEPDTSTV
PLDNATIPNSALQAPTVCVYLNKYGKVGPHLDLRRIQQLPDHFGPGRASSVLQQCVQACV
DSSHNQGTVFACLKSGQGGEVISACFDKQQHTLTLPTVSSVTYVLRFLEKLCHNLHCDPL
FGSQPVARGGLHYDSHTYITERRSLGDGLTTGPGRGTKRFLQDYNISLPQKIAKTSRHST
DGESLMEKSVAVSEHLKKSPLSPNSTVQTHSLRSPSKLLHHNNSTGSGSFRGSPRPSGQD
PNLWTVEDVMHYIRDIDPVLAPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLT
FHIDKLKRA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacccgtgccacagaaagctatagagtggaaagatgccagaaggatcaagcat
gcccggagtggacggccctcccgggtgccctcacagtaccaaggacatttcagttgggag
aaatacctgaaagaaacaggtgcggccgctgcaccctctgcttgcttcagacagagcctc
acacctccacttaatgagttcaaagcaggtatgaagctggaggcccaggaccctcgaaac
acaacgtccacctgcatcgccacggtggtgggcctgacaggctcgcggttgcggttgcgc
ttggacgggtctgataacaagaacgacttctggcgcctcgtggactcctcagagatacag
cctattggcaactgtgaaaagaatggaggcatgcttcagccaccacttggttttcgtctc
aatgcgtcctcttggcccatgttcctactgaaaacactaaatggagctgaaatggcaccc
tctcgcatatttcacaagcaggagcctcccgccccagagcagaactctttccagataggc
atgaagctggaggcggtggaccgtaaaaatccccactttatctgcccggcgacagtgggt
gcactgcgtggcgtcgaggtgctggtcacctttgatggctggcgaggagcctttgactac
tactgccgctatgactcgcgagacatcttccccgtaggctggtgcgccctcactggggac
aaccttcagccgcctggcactaaagtagtgttgcctaagagccttgggacattgacagac
gggagtgtggagagcccagccatgcaccccacgcccacagtgggcagacctctaggtcag
agaggacgcaagccaggccgcagaaaaaccaagctggcagggccctggaatcagaagggc
tcagtgttaggaccgccaagtatccagccaggcaaaggcctggagcccatcaagatcccc
aagaaacgagggcccaagcctggcagtaagttgggctgggcaaaaagagctggttggctg
gaagatgccatggctggcccaggacggccagtgaccggcccagggcgaaccagaggcaga
ctgcctgccaactgggcacagaggatagctctgcaggagccccagactccggcagaaccc
atcaagatcccaaagaaaagagggcccaagcctggcagcaagagaaaaccacgcgtggta
cccaatccagtccccacgtctcccaccatcagcactccagagcccgacaccagcaccgtg
cctctggacaatgccaccatccccaactctgcactacaggcccctacagtttgtgtgtac
ctaaacaagtacggcaaggtgggaccccatttggacctgcggcgtattcagcagctcccg
gatcactttgggccaggccgggcctcctcggtgcttcagcagtgtgttcaggcttgtgtg
gactcctcgcacaaccagggcacagtctttgcctgcctcaagtctgggcaaggaggtgaa
gtcatttcagcctgctttgacaagcagcagcacaccctgaccctgcccacagtcagcagt
gtcacttacgtcctccgcttcctggaaaaactctgccacaaccttcactgcgatcctctg
tttggcagccagcctgtagccagaggaggcctgcactacgacagtcacacatacattaca
gagaggagaagtttgggggacggcctaacaacgggcccgggccgaggcaccaagcggttc
cttcaggactacaacatttcactgcctcagaaaatagccaaaacctctcggcactccact
gatggtgagtccttaatggagaagagtgttgcggtgtcagagcacttaaagaagagccct
ctctctccaaactctactgtacaaactcacagcctgaggtctccctccaagctgctgcat
cacaacaactccacaggctcaggtagtttccgggggagcccgaggccgagtggccaggac
cccaacctgtggacagtagaggacgtcatgcactatatcagagatatcgacccagtgctg
gcaccacatgctgaccttttcagaaaacatgagattgacgggaaagccctcctgttgctg
cgtagtgacatgatgatgaaatacatgggcttgaagctcggccccgccctcaaactcacc
ttccatatcgacaagctcaaacgggcttga
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