Etheostoma cragini (Arkansas darter): 117946479
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Entry
117946479 CDS
T07493
Name
(RefSeq) LIM domain-containing protein 1-like
KO
K16682
LIM domain-containing protein
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117946479
03036 Chromosome and associated proteins [BR:
ecra03036
]
117946479
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117946479
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
117946479
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
117946479
NCBI-ProteinID:
XP_034730551
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All DBs
Position
6:complement(13293108..13315022)
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AA seq
612 aa
AA seq
DB search
MDKYEDLGLEASKFIEDLNMYEASRDGLFRTRRDAGNNPDFEETRKVFASKMTKIHMQKQ
QEEIAKNNQAMKMNGGHNSTYYTKDRPPINSYRQPCEAAAKPPILSGPVPSTTSGNQYAQ
FDGQKHHTVIQPELPVGRAYGYGNNYDNKERSEPHTPPNPGNASHSAPTHARHPVSQSAG
WAPSRESQLSPALSGSGGNSTSQQHPQSAPPTANSLPSQQNQAVTPSVNLSPPSSAGPAL
GWAGEPSGSAKSDLIHALPLSAFTAGAEFHMQQPCTHSAGHYTPSSPNLTPYTNHNGPAA
ASSLLPASFEKPIPKGQVASAALMPGNVSRSRSSQGQGQSQIPICGHAFSAEADVLCSPK
PVYQPCESLHAQPPEEGPSAAEIKLEALTNRLEREMDAQPKADYFGVCVKCNKAVYGASK
ACQAMGSLYHDSCFTCSACSRRLRGKAFYYVGGRVFCEEDFLYSGFQQSADKCNACGHLI
MDMILQALGKSYHPGCFRCVICNESLDGVPFTVDTENKIYCLKDYHRVLAPKCAACNQPI
LPSEGSDETIRVVSMDKDYHVECYHCEDCKMELNDEEGHRCYPLNGHLLCHSCHLKHMEP
GCPSPIAAAASY
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggataaatacgaagatttaggactggaggcgagtaagtttatcgaggaccttaacatg
tatgaagcatccagagatggtttatttcgaacgaggagggatgcaggaaataaccccgac
tttgaagagacacggaaagtttttgcctctaaaatgactaaaatacacatgcagaaacag
caagaggagattgccaaaaacaaccaggccatgaagatgaatggtggccacaacagcaca
tattacaccaaagacagaccgcccatcaatagttacaggcagccgtgtgaagcggcagcg
aagcccccgatactctctggccctgtgccgagcaccacgtctggcaatcagtacgcgcag
tttgacggccagaaacaccacacagttattcagcctgaacttccagtcggcagggcatat
ggctacggaaacaattacgataataaggagcgctcagagccacatacaccccccaaccca
ggaaacgcgtctcatagcgcgcccacacatgctcgtcacccggtcagccagtcggcgggc
tgggccccatccagagagagccagctttccccagctttgtctggatctgggggcaacagt
acgtctcagcagcacccccagtctgcacctcccacagccaacagtctaccatcccagcag
aatcaggctgtcaccccgtctgtaaacctgagtccaccctcatctgctgggccagccttg
ggctgggctggagagccctctggatcagccaaatctgacctcatccatgccctgcctctg
agtgctttcacagcaggagctgagttccacatgcagcagccctgcacacactctgcgggg
cattatacaccatcttctcctaatttgacaccctatacaaaccataatggtcctgcggca
gcgtcctcgctcctgcctgcatcttttgaaaaacctatacccaaaggccaggtggcctcg
gctgccttgatgcctggcaatgtctcgagaagcaggagcagccagggtcaaggtcaaagc
caaatacccatctgtggacatgcctttagtgctgaagctgatgtcctgtgctcccccaag
cctgtctatcaaccctgcgagtctctccatgctcagccacctgaagaggggccttcagca
gctgaaataaagttagaagccctcaccaatcggctggaaagagagatggatgcccaacca
aaggctgattattttggagtctgtgtaaagtgcaacaaggctgtgtatggagccagcaag
gcctgccaagctatgggtagcctctaccatgacagctgcttcacctgcagcgcctgcagt
cgaaggctgagaggaaaggcgttctattatgtcggagggagagttttctgtgaagaagat
tttctgtactctggtttccagcagtctgcagacaagtgcaacgcatgtggacatctgatc
atggacatgatcctgcaggccctcgggaagtcgtaccaccccggctgtttccgctgtgtc
atctgtaatgagagccttgacggagtgcccttcactgtggacactgaaaataagatatac
tgtcttaaagattaccacagggtcctggcgcctaaatgtgcagcctgtaaccagcccatc
ctgccctcagaggggtctgatgaaaccattcgagttgtatccatggacaaggactaccat
gtggaatgctatcactgtgaggactgtaagatggagctgaacgacgaagagggtcaccgc
tgctaccctctgaacggccacctgctctgccactcgtgccacctgaagcacatggagcct
gggtgcccctctcccatcgctgctgctgcctcctactaa
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