Etheostoma cragini (Arkansas darter): 117946512
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Entry
117946512 CDS
T07493
Symbol
atg5
Name
(RefSeq) autophagy protein 5
KO
K08339
autophagy-related protein 5
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04136
Autophagy - other
ecra04140
Autophagy - animal
ecra04145
Phagocytosis
ecra04216
Ferroptosis
ecra04621
NOD-like receptor signaling pathway
ecra04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
117946512 (atg5)
04140 Autophagy - animal
117946512 (atg5)
04136 Autophagy - other
117946512 (atg5)
09143 Cell growth and death
04216 Ferroptosis
117946512 (atg5)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117946512 (atg5)
04622 RIG-I-like receptor signaling pathway
117946512 (atg5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117946512 (atg5)
03029 Mitochondrial biogenesis [BR:
ecra03029
]
117946512 (atg5)
Membrane trafficking [BR:
ecra04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
117946512 (atg5)
Mitochondrial biogenesis [BR:
ecra03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117946512 (atg5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_UblB
ATG5_HBR
Peptidase_M99
DUF8018
Motif
Other DBs
NCBI-GeneID:
117946512
NCBI-ProteinID:
XP_034730598
LinkDB
All DBs
Position
6:complement(27054839..27085560)
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AA seq
275 aa
AA seq
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MADDKDVLRDVWFGRIPTCFILNQDEVTEREAEPYYLLLPRVSYLTLVTDKVKKHFHKVV
RTDDVEEMWLEYEGTPLKWHYPIGVLFDLHASNTVLPWTITVHFKNFPDRDLLHCPSNSV
IEAHFMSSIKEADALKHKSQVVNDMQKKDHKQLWMGLQNDKFDQFWAMNRKLMEYPSEEG
GFRYIPFRIYQTMSDRPFIQKLFRPVSPEGNTHTLGDLLKEMCPAALPNNGEQKRYQVVV
HGIEPLLETPLQWLSEHLSHPDNFLHICITPVPSD
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgacaaggacgtgttgagagacgtgtggttcggccggatccccacctgcttc
attctgaaccaggatgaggttactgagagagaggccgagccctactatctgttgctaccc
agggtcagctacttgactctggttacagacaaggtgaagaaacacttccacaaagtggtg
aggaccgatgacgtggaggagatgtggttggagtacgaggggacgccgctgaaatggcac
tatccaattggagttctgtttgacctccatgcgtccaacactgtcttaccctggaccatc
actgtgcactttaagaactttccagatcgtgacctgctccactgtccctccaactcggtg
atcgaggctcacttcatgtccagcatcaaggaggccgacgctctgaagcataagagccaa
gtcgtcaacgacatgcagaagaaagaccacaaacagctgtggatgggcctgcagaacgat
aagtttgaccagttctgggccatgaacaggaagctgatggaatatcccagcgaggaggga
ggcttcagatacatccccttcaggatataccagacgatgagtgacaggccgttcatccag
aagctgtttcgccccgtttcacccgaaggcaacacgcacacccttggggacctgctgaaa
gagatgtgcccagctgctttaccaaacaacggtgagcagaagcgttaccaggtggtggtc
cacggcatcgagccgctgctggagacgcctctgcagtggctgagcgaacacctcagtcac
cccgacaacttcctgcacatctgcatcacacctgtcccctctgactga
DBGET
integrated database retrieval system